FFCP PHASE1:Hg19::chr3:42977893..42977900,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100506243|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=38708|TSSclassifier=S|UniProt=C9JBD0|association_with_transcript=9bp_to_ENST00000443313_5end|description=CAGE_peak_6_at_KRBOX1_5end|id=chr3:42977893..42977900,+|ontology_enrichment_celltype=CL:0000055!6.30e-12!180;CL:0000057!2.16e-09!75|ontology_enrichment_celltype_v019=CL:0002537;3.84e-14;5!CL:0002540;6.00e-12;6!CL:0002583;1.44e-09;2!CL:0000349;2.03e-08;19!CL:0002092;1.57e-07;10!CL:0000134;2.04e-07;55!CL:0002603;6.32e-07;3|ontology_enrichment_celltype_v019_2=CL:0002537,4.69e-14,5;CL:0002540,6.70e-12,6;CL:0002583,1.71e-09,2;CL:0000349,1.98e-08,19;CL:0002092,1.67e-07,10;CL:0002603,6.50e-07,3|ontology_enrichment_development_v019=UBERON:0009117;1.04e-07;10!UBERON:0005564;1.04e-07;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;8.62e-07;3!DOID:127;8.62e-07;3|ontology_enrichment_disease_v019_2=DOID:0060084,9.12e-07,3;DOID:127,9.12e-07,3|ontology_enrichment_uberon=UBERON:0000475!3.89e-07!365|ontology_enrichment_uberon_v019=UBERON:0000305;2.24e-10;7!UBERON:0000473;2.03e-09;8!UBERON:0005631;1.57e-07;10!UBERON:0000158;1.57e-07;10!UBERON:0003135;4.36e-07;11!UBERON:0000478;8.94e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.58e-10,7;UBERON:0000473,1.99e-09,8;UBERON:0004871,3.86e-09,8;UBERON:0003135,4.30e-07,11;UBERON:0000478,8.77e-07,24|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0.436882744260345,0,0,0,0,0,0,0,0.123121058076788,0.612002073732759,2.19418305034661,0.85870796139317,0.410623275218653,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0.289693037921647,0,0,0.378139268656271,0,0.175669571386252,1.30979075497713,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633152558322899,0,0.286836620748814,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0.149448680551801,0.469737994575059,0.485618833104395,0.280901613404497,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0.505008341862199,0.250237039743928,0,0.877955241761676,0,0.300476117813194,0.226864366320042,0,0.213557388818567,0.635795703478686,0.300091096084402,0,0.257640540045629,0.37223371266318,0.337552664482532,0.292311015483596,0,0.184099797284599,0,0,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0.219500570817251,0,0.201057944823262,0.370353780634118,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0.268675568108545,0.871901815541886,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.36669142910475,0.129271715757778,0,0,0,1.04007436911366,1.02882949704857,1.41849132023278,0.532844358032199,0.142977993658148,0,1.64648067356154,0,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0.76228387266739,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0.195801157462741,0.686286847621712,0,0,0,0.303127571446259,0,0.604780586659361,0.248107807818777,0.61384789315225,0.280660094433074,0,0,0.160853921143607,0,1.07946785661859,0.355123450626254,0.0821271560138091,0,0.232420756919918,0,0,0.0920809889358963,0,0.910455840033585,0,0.451199612907412,0.616122696835318,0,0,0.211103257785751,0,0,0.647747748306418,0,0.541892875087706,0,0.509752546090077,0,0,0,0,0,0.328014645699706,0.650756789328606,0,0,0.165018999841176,0,0,0,0,0.308097234229289,0.614014698904518,0.827019434907183,0.214840489736547,0.145016693914229,0.511359764496605,0,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0.429374660225974,0.744316738719335,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0.709522128141196,0,0.329294892959902,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18785872333055,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.762760950878299,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0.591095237907095,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.391329237864179,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609414446062818,0.698906672968121,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.189932387867636,0.195551382734803,0,0,0,0,0,0.686379991447858,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100506243 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=38708 | |||
|TSSclassifier=S | |||
|UniProt=C9JBD0 | |||
|association_with_transcript=9bp_to_ENST00000443313_5end | |||
|description=CAGE_peak_6_at_KRBOX1_5end | |||
|id=chr3:42977893..42977900,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.30e-12!180;CL:0000057!2.16e-09!75 | |||
|ontology_enrichment_celltype_v019=CL:0002537;3.84e-14;5!CL:0002540;6.00e-12;6!CL:0002583;1.44e-09;2!CL:0000349;2.03e-08;19!CL:0002092;1.57e-07;10!CL:0000134;2.04e-07;55!CL:0002603;6.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,4.69e-14,5;CL:0002540,6.70e-12,6;CL:0002583,1.71e-09,2;CL:0000349,1.98e-08,19;CL:0002092,1.67e-07,10;CL:0002603,6.50e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.04e-07;10!UBERON:0005564;1.04e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;8.62e-07;3!DOID:127;8.62e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,9.12e-07,3;DOID:127,9.12e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000475!3.89e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;2.24e-10;7!UBERON:0000473;2.03e-09;8!UBERON:0005631;1.57e-07;10!UBERON:0000158;1.57e-07;10!UBERON:0003135;4.36e-07;11!UBERON:0000478;8.94e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,2.58e-10,7;UBERON:0000473,1.99e-09,8;UBERON:0004871,3.86e-09,8;UBERON:0003135,4.30e-07,11;UBERON:0000478,8.77e-07,24 | |||
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| |||
|short_description=p6@KRBOX1 | |||
}} |
Revision as of 00:11, 13 September 2013
Short description: | p6@KRBOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_KRBOX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000443313_5end |
EntrezGene: | KRBOX1 |
HGNC: | 38708 |
UniProt: | C9JBD0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 4.69e-14 | 5 |
mesenchymal stem cell of the bone marrow | 6.70e-12 | 6 |
subcutaneous preadipocyte | 1.71e-09 | 2 |
extraembryonic cell | 1.98e-08 | 19 |
bone marrow cell | 1.67e-07 | 10 |
astrocyte of the cerebellum | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
amnion | 2.58e-10 | 7 |
testis | 1.99e-09 | 8 |
somatic layer of lateral plate mesoderm | 3.86e-09 | 8 |
male reproductive organ | 4.30e-07 | 11 |
extraembryonic structure | 8.77e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 9.12e-07 | 3 |
leiomyoma | 9.12e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.