FFCP PHASE1:Hg19::chr22:50738736..50738785,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1155|description=CAGE_peak_at_chr22:50738736..50738785,-|id=chr22:50738736..50738785,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:1000507;3.05e-11;10!CL:1000494;3.05e-11;10!CL:1000449;2.31e-08;15!CL:1000497;4.70e-07;17!CL:0002518;4.70e-07;17!CL:0002322;8.26e-07;5|ontology_enrichment_celltype_v019_2=CL:0000066,1.44e-11,253;CL:1000507,1.68e-11,10;CL:1000494,1.68e-11,10;CL:1000449,1.56e-08,15;CL:1000497,3.37e-07,17;CL:0002518,3.37e-07,17|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,1.02e-10,106;DOID:0050687,4.26e-07,143|ontology_enrichment_uberon=UBERON:0000062!7.99e-14!511;UBERON:0000064!2.36e-11!219;UBERON:0000468!2.21e-07!659;UBERON:0001737!3.12e-07!9;UBERON:0000063!3.72e-07!97|ontology_enrichment_uberon_v019=UBERON:0001737;2.26e-11;9!UBERON:0001557;2.26e-11;9!UBERON:0004211;3.05e-11;10!UBERON:0009773;3.05e-11;10!UBERON:0001231;3.05e-11;10!UBERON:0004810;3.05e-11;10!UBERON:0005409;3.40e-11;22!UBERON:0000160;4.67e-10;17!UBERON:0006555;2.31e-08;15!UBERON:0004819;2.31e-08;15!UBERON:0001285;2.31e-08;15!UBERON:0007684;2.31e-08;15!UBERON:0004921;3.07e-08;33!UBERON:0002108;6.00e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.68e-11,10;UBERON:0001737,1.88e-11,9;UBERON:0005409,1.46e-10,25;UBERON:0000160,3.67e-10,17;UBERON:0004921,4.79e-10,118;UBERON:0004211,1.56e-08,15;UBERON:0009773,1.56e-08,15;UBERON:0001231,1.56e-08,15;UBERON:0001285,1.56e-08,15;UBERON:0007684,1.56e-08,15;UBERON:0004208,1.56e-08,15;UBERON:0006555,8.01e-08,16;UBERON:0004819,8.01e-08,16;UBERON:0005172,3.68e-07,54;UBERON:0005173,3.68e-07,54;UBERON:0001007,3.93e-07,145;UBERON:0001555,3.93e-07,145;UBERON:0007026,3.93e-07,145;UBERON:0001041,6.36e-07,87;UBERON:0002108,7.31e-07,4;UBERON:0004119,9.65e-07,160;UBERON:0000925,9.65e-07,160;UBERON:0006595,9.65e-07,160|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0.872338524100369,0,0,0.261185628199839,0.982935746006035,9.07141518364156,0.436882744260345,0.263766978228454,0,0.331397375727916,0,0,0,0,1.10808952269109,0.612002073732759,0.626909442956176,0.286235987131057,0.821246550437305,0.376627918784408,0.382067028739756,0.328402357799783,0.157421562627358,1.57345710739562,0.383829398097213,0.154816123316076,1.83884244895785,1.50602959389125,0.369754010166788,7.74672005803016,0,0.880801318004542,0.553995408531877,0,0.434021741431704,0,0,0,0.581592955118259,0.377875943688809,0.485168122375632,0.464858073811369,0.411167888021826,0,0.575384784644301,0.256160706529101,0,1.03423704220986,0,0,0.564727018627814,0.545812300115692,0.674170453335254,0,0,0.639337125799041,0,0.797854630486527,0.426224750532694,0.290209238628584,0,0,0,1.5644487552606,0.434377689410233,0,0.368277635987565,0,1.05627643155971,1.4882300997553,0.419317291016752,0.112328631146495,0,0.32145117339416,1.42506371870624,1.9891667719909,1.82664153764634,0,0,0,0,0,0,0,0,0,1.17447437874188,1.91136614062614,5.28685314316103,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,1.80719576192283,0.50133791063589,1.30361867064741,0,0,0.378139268656271,0.665188192387692,0.263504357079378,6.22150608614135,0.364295288292542,0.370784442784429,0.649094787309367,0.348259474598534,0.398873881556595,2.38490624305342,0.571994910780128,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735326160691737,0,0,0.22452937262617,0.675668882899933,0,0,0,0,0,2.18047026071267,0,0,0,0.286836620748814,0,1.12135520028461,0,0,0,0,0,0.605429710579726,0.576175924479999,0.468642863667593,0.312160076830321,0,0.747243402759005,0,0,0.280901613404497,0.408308342509787,0.491337269247072,0.516628905878827,0,0.494533858557114,0.910161361938026,0,0.168336113954066,0.750711119231785,0.277064115484183,0,0.30648779579902,0.150238058906597,0.113432183160021,2.15267562826634,0.213557388818567,0.211931901159562,2.10063767259082,0,0.772921620136887,0.558350568994769,1.18143432568886,0.389748020644795,1.51460264546469,0.0920498986422993,0,1.06502877754984,0.705264687593482,0.67824236924195,0,0,0,4.02513230227665,4.10842281796604,5.34492137199785,2.07322110030741,6.81266297364197,0.72995471815166,0,0,0,0,0,5.91534000199219,5.73187946265546,7.71235295627142,4.85293480022533,5.88274499049497,4.03360052488864,4.85392709376592,4.12065076763227,6.15595451114225,0,0,1.6462960453256,0,67.1801684555704,55.0383241339471,48.4447723478751,0,50.0562944870472,0.686271241194102,0.439001141634502,0,0.402115889646523,0.370353780634118,1.3032332212413,0,1.44331342025273,0.115930404975077,0.587043471179108,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.576479813667846,0.50496973370552,0.063497894292169,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0.514414748524284,1.4184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n=p@chr22:50738736..50738785,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1155 | |||
|description=CAGE_peak_at_chr22:50738736..50738785,- | |||
|id=chr22:50738736..50738785,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000507;3.05e-11;10!CL:1000494;3.05e-11;10!CL:1000449;2.31e-08;15!CL:1000497;4.70e-07;17!CL:0002518;4.70e-07;17!CL:0002322;8.26e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.44e-11,253;CL:1000507,1.68e-11,10;CL:1000494,1.68e-11,10;CL:1000449,1.56e-08,15;CL:1000497,3.37e-07,17;CL:0002518,3.37e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.02e-10,106;DOID:0050687,4.26e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000062!7.99e-14!511;UBERON:0000064!2.36e-11!219;UBERON:0000468!2.21e-07!659;UBERON:0001737!3.12e-07!9;UBERON:0000063!3.72e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.26e-11;9!UBERON:0001557;2.26e-11;9!UBERON:0004211;3.05e-11;10!UBERON:0009773;3.05e-11;10!UBERON:0001231;3.05e-11;10!UBERON:0004810;3.05e-11;10!UBERON:0005409;3.40e-11;22!UBERON:0000160;4.67e-10;17!UBERON:0006555;2.31e-08;15!UBERON:0004819;2.31e-08;15!UBERON:0001285;2.31e-08;15!UBERON:0007684;2.31e-08;15!UBERON:0004921;3.07e-08;33!UBERON:0002108;6.00e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.68e-11,10;UBERON:0001737,1.88e-11,9;UBERON:0005409,1.46e-10,25;UBERON:0000160,3.67e-10,17;UBERON:0004921,4.79e-10,118;UBERON:0004211,1.56e-08,15;UBERON:0009773,1.56e-08,15;UBERON:0001231,1.56e-08,15;UBERON:0001285,1.56e-08,15;UBERON:0007684,1.56e-08,15;UBERON:0004208,1.56e-08,15;UBERON:0006555,8.01e-08,16;UBERON:0004819,8.01e-08,16;UBERON:0005172,3.68e-07,54;UBERON:0005173,3.68e-07,54;UBERON:0001007,3.93e-07,145;UBERON:0001555,3.93e-07,145;UBERON:0007026,3.93e-07,145;UBERON:0001041,6.36e-07,87;UBERON:0002108,7.31e-07,4;UBERON:0004119,9.65e-07,160;UBERON:0000925,9.65e-07,160;UBERON:0006595,9.65e-07,160 | |||
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| |||
|short_description=p@chr22:50738736..50738785,- | |||
}} |
Revision as of 12:33, 12 September 2013
Short description: | p@chr22:50738736..50738785, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr22:50738736..50738785, - |
Coexpression cluster: | C1155_Hepatocyte_Intestinal_Prostate_liver_colon_small_Retinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.44e-11 | 253 |
kidney tubule cell | 1.68e-11 | 10 |
nephron tubule epithelial cell | 1.68e-11 | 10 |
epithelial cell of nephron | 1.56e-08 | 15 |
kidney cell | 3.37e-07 | 17 |
kidney epithelial cell | 3.37e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.68e-11 | 10 |
larynx | 1.88e-11 | 9 |
gastrointestinal system | 1.46e-10 | 25 |
intestine | 3.67e-10 | 17 |
subdivision of digestive tract | 4.79e-10 | 118 |
nephron epithelium | 1.56e-08 | 15 |
renal tubule | 1.56e-08 | 15 |
nephron tubule | 1.56e-08 | 15 |
nephron | 1.56e-08 | 15 |
uriniferous tubule | 1.56e-08 | 15 |
nephrogenic mesenchyme | 1.56e-08 | 15 |
excretory tube | 8.01e-08 | 16 |
kidney epithelium | 8.01e-08 | 16 |
abdomen element | 3.68e-07 | 54 |
abdominal segment element | 3.68e-07 | 54 |
digestive system | 3.93e-07 | 145 |
digestive tract | 3.93e-07 | 145 |
primitive gut | 3.93e-07 | 145 |
foregut | 6.36e-07 | 87 |
small intestine | 7.31e-07 | 4 |
endoderm-derived structure | 9.65e-07 | 160 |
endoderm | 9.65e-07 | 160 |
presumptive endoderm | 9.65e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.02e-10 | 106 |
cell type cancer | 4.26e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.