FFCP PHASE1:Hg19::chr22:42269579..42269583,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6721|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11290|TSSclassifier=W|UniProt=|association_with_transcript=-109bp_to_ENST00000462539_5end|description=CAGE_peak_13_at_SREBF2_5end|id=chr22:42269579..42269583,+|ontology_enrichment_celltype=CL:0000838!2.22e-39!52;CL:0000542!1.74e-38!53;CL:0000051!1.74e-38!53;CL:0002087!5.70e-25!119;CL:0000236!1.01e-20!14;CL:0002031!1.24e-20!124;CL:0000738!8.37e-20!140;CL:0000624!3.78e-19!6;CL:0000791!6.66e-19!18;CL:0000789!6.66e-19!18;CL:0002420!6.66e-19!18;CL:0002419!6.66e-19!18;CL:0000790!6.66e-19!18;CL:0000084!5.99e-18!25;CL:0000827!5.99e-18!25;CL:0000945!8.59e-16!24;CL:0000826!8.59e-16!24;CL:0000037!2.18e-14!172;CL:0000566!2.18e-14!172;CL:0002032!2.60e-13!165;CL:0000837!2.60e-13!165;CL:0000988!4.27e-13!182;CL:0000623!1.65e-10!3;CL:0000825!1.65e-10!3;CL:0000898!4.04e-10!3;CL:0000815!4.81e-07!2;CL:0000792!4.81e-07!2;CL:0002677!4.81e-07!2|ontology_enrichment_celltype_v019=CL:0000624;4.06e-30;6!CL:0000236;4.64e-21;13!CL:0000542;4.49e-17;53!CL:0000623;1.22e-15;3!CL:0000791;1.85e-15;18!CL:0000789;1.85e-15;18!CL:0002419;1.85e-15;18!CL:0000895;8.83e-13;1!CL:0000945;2.15e-11;24!CL:0000084;4.11e-11;25|ontology_enrichment_celltype_v019_2=CL:0000624,3.78e-30,6;CL:0000838,6.60e-29,52;CL:0000542,2.48e-28,53;CL:0000051,2.48e-28,53;CL:0000236,1.29e-19,14;CL:0000623,1.06e-15,3;CL:0000825,1.06e-15,3;CL:0000791,2.00e-15,18;CL:0000789,2.00e-15,18;CL:0002420,2.00e-15,18;CL:0002419,2.00e-15,18;CL:0000790,2.00e-15,18;CL:0000810,9.92e-13,1;CL:0000895,9.92e-13,1;CL:0002436,9.92e-13,1;CL:0002427,9.92e-13,1;CL:0002428,9.92e-13,1;CL:0002429,9.92e-13,1;CL:0002433,9.92e-13,1;CL:0002431,9.92e-13,1;CL:0002432,9.92e-13,1;CL:0002087,4.72e-12,115;CL:0002031,1.75e-11,120;CL:0000945,1.99e-11,24;CL:0000826,1.99e-11,24;CL:0000084,4.34e-11,25;CL:0000827,4.34e-11,25;CL:0000738,6.11e-10,136;CL:0002032,3.89e-08,161;CL:0000837,3.89e-08,161;CL:0000037,1.00e-07,168;CL:0000988,3.03e-07,177;CL:0000893,5.41e-07,2;CL:0002489,5.41e-07,2;CL:0000809,5.41e-07,2;CL:0000808,5.41e-07,2;CL:0000894,5.41e-07,2;CL:0000806,5.41e-07,2;CL:0000807,5.41e-07,2;CL:0000805,5.41e-07,2;CL:0002425,5.41e-07,2|ontology_enrichment_development_v019=CL:0000051;4.49e-17;53!CL:0000790;1.85e-15;18!CL:0002427;8.83e-13;1!CL:0002425;5.11e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!7.11e-11!7;UBERON:0001042!9.40e-11!10;UBERON:0009145!9.40e-11!10;UBERON:0006562!1.05e-09!11;UBERON:0002370!6.48e-08!4;UBERON:0005058!6.48e-08!4;UBERON:0009113!6.48e-08!4;UBERON:0003295!6.48e-08!4;UBERON:0005562!6.48e-08!4|ontology_enrichment_uberon_v019=UBERON:0000029;8.83e-13;1!UBERON:0002370;8.28e-07;2!UBERON:0005058;8.28e-07;2!UBERON:0009113;8.28e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000029,7.89e-13,1;UBERON:0002370,3.45e-12,4;UBERON:0005058,3.45e-12,4;UBERON:0009113,3.45e-12,4;UBERON:0003295,3.45e-12,4;UBERON:0005562,3.45e-12,4;UBERON:0003351,2.02e-08,6;UBERON:0004177,2.45e-07,7;UBERON:0005057,2.45e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,0,0.400395987036012,1.14950487990897,1.32208974556972,0.954053754535364,1.70763890732835,1.17447437874188,0,0,0,0,4.52432471261816,1.57204305099666,1.23360899399706,0,0.32592226663359,0,0,0,0.883817722424512,0.221533894583621,0.270803863765016,0,0.520237390239513,0,0,0,1.77943875794473,0.267540828089713,1.04535523804977,0,2.29932296161153,1.03088233644789,2.53019692019503,0,0,0,0.451725357233318,0.255973222308837,0,0,0,0.403213486449465,0.802320587350522,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985153801009636,1.2937654491571,1.54011643535698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6721 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11290 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-109bp_to_ENST00000462539_5end | |||
|description=CAGE_peak_13_at_SREBF2_5end | |||
|id=chr22:42269579..42269583,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.22e-39!52;CL:0000542!1.74e-38!53;CL:0000051!1.74e-38!53;CL:0002087!5.70e-25!119;CL:0000236!1.01e-20!14;CL:0002031!1.24e-20!124;CL:0000738!8.37e-20!140;CL:0000624!3.78e-19!6;CL:0000791!6.66e-19!18;CL:0000789!6.66e-19!18;CL:0002420!6.66e-19!18;CL:0002419!6.66e-19!18;CL:0000790!6.66e-19!18;CL:0000084!5.99e-18!25;CL:0000827!5.99e-18!25;CL:0000945!8.59e-16!24;CL:0000826!8.59e-16!24;CL:0000037!2.18e-14!172;CL:0000566!2.18e-14!172;CL:0002032!2.60e-13!165;CL:0000837!2.60e-13!165;CL:0000988!4.27e-13!182;CL:0000623!1.65e-10!3;CL:0000825!1.65e-10!3;CL:0000898!4.04e-10!3;CL:0000815!4.81e-07!2;CL:0000792!4.81e-07!2;CL:0002677!4.81e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000624;4.06e-30;6!CL:0000236;4.64e-21;13!CL:0000542;4.49e-17;53!CL:0000623;1.22e-15;3!CL:0000791;1.85e-15;18!CL:0000789;1.85e-15;18!CL:0002419;1.85e-15;18!CL:0000895;8.83e-13;1!CL:0000945;2.15e-11;24!CL:0000084;4.11e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.78e-30,6;CL:0000838,6.60e-29,52;CL:0000542,2.48e-28,53;CL:0000051,2.48e-28,53;CL:0000236,1.29e-19,14;CL:0000623,1.06e-15,3;CL:0000825,1.06e-15,3;CL:0000791,2.00e-15,18;CL:0000789,2.00e-15,18;CL:0002420,2.00e-15,18;CL:0002419,2.00e-15,18;CL:0000790,2.00e-15,18;CL:0000810,9.92e-13,1;CL:0000895,9.92e-13,1;CL:0002436,9.92e-13,1;CL:0002427,9.92e-13,1;CL:0002428,9.92e-13,1;CL:0002429,9.92e-13,1;CL:0002433,9.92e-13,1;CL:0002431,9.92e-13,1;CL:0002432,9.92e-13,1;CL:0002087,4.72e-12,115;CL:0002031,1.75e-11,120;CL:0000945,1.99e-11,24;CL:0000826,1.99e-11,24;CL:0000084,4.34e-11,25;CL:0000827,4.34e-11,25;CL:0000738,6.11e-10,136;CL:0002032,3.89e-08,161;CL:0000837,3.89e-08,161;CL:0000037,1.00e-07,168;CL:0000988,3.03e-07,177;CL:0000893,5.41e-07,2;CL:0002489,5.41e-07,2;CL:0000809,5.41e-07,2;CL:0000808,5.41e-07,2;CL:0000894,5.41e-07,2;CL:0000806,5.41e-07,2;CL:0000807,5.41e-07,2;CL:0000805,5.41e-07,2;CL:0002425,5.41e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;4.49e-17;53!CL:0000790;1.85e-15;18!CL:0002427;8.83e-13;1!CL:0002425;5.11e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.11e-11!7;UBERON:0001042!9.40e-11!10;UBERON:0009145!9.40e-11!10;UBERON:0006562!1.05e-09!11;UBERON:0002370!6.48e-08!4;UBERON:0005058!6.48e-08!4;UBERON:0009113!6.48e-08!4;UBERON:0003295!6.48e-08!4;UBERON:0005562!6.48e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;8.83e-13;1!UBERON:0002370;8.28e-07;2!UBERON:0005058;8.28e-07;2!UBERON:0009113;8.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,7.89e-13,1;UBERON:0002370,3.45e-12,4;UBERON:0005058,3.45e-12,4;UBERON:0009113,3.45e-12,4;UBERON:0003295,3.45e-12,4;UBERON:0005562,3.45e-12,4;UBERON:0003351,2.02e-08,6;UBERON:0004177,2.45e-07,7;UBERON:0005057,2.45e-07,7 | |||
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|short_description=p13@SREBF2 | |||
}} |
Revision as of 12:11, 12 September 2013
Short description: | p13@SREBF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_SREBF2_5end |
Coexpression cluster: | NA |
Association with transcript: | -109bp_to_ENST00000462539_5end |
EntrezGene: | SREBF2 |
HGNC: | 11290 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 7.89e-13 | 1 |
thymus | 3.45e-12 | 4 |
hemolymphoid system gland | 3.45e-12 | 4 |
thymic region | 3.45e-12 | 4 |
pharyngeal gland | 3.45e-12 | 4 |
thymus primordium | 3.45e-12 | 4 |
pharyngeal epithelium | 2.02e-08 | 6 |
hemopoietic organ | 2.45e-07 | 7 |
immune organ | 2.45e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.