FFCP PHASE1:Hg19::chr22:30643150..30643164,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3976|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6596|TSSclassifier=W|UniProt=P15018|association_with_transcript=-310bp_to_ENST00000249075_5end|description=CAGE_peak_3_at_LIF_5end|id=chr22:30643150..30643164,-|ontology_enrichment_celltype=CL:1000507!8.45e-09!12;CL:1000494!8.45e-09!12;CL:0000077!9.13e-09!19;CL:0002274!1.09e-08!5;CL:0000457!1.09e-08!5;CL:0002191!1.09e-08!5;CL:0000097!1.09e-08!5;CL:0000831!1.09e-08!5;CL:0002028!1.09e-08!5;CL:1000497!6.69e-08!18;CL:0002518!6.69e-08!18;CL:1000449!1.96e-07!16;CL:0000220!4.22e-07!246;CL:0002319!4.97e-07!25;CL:0002321!6.45e-07!248;CL:0000128!8.04e-07!7;CL:0000126!8.04e-07!7;CL:0000127!8.04e-07!7;CL:0002453!8.04e-07!7;CL:0000548!8.44e-07!679;CL:0000004!8.44e-07!679;CL:0000255!8.44e-07!679;CL:0000243!8.57e-07!15;CL:0000125!8.57e-07!15;CL:0000030!8.57e-07!15;CL:0000339!8.57e-07!15;CL:0000066!9.45e-07!254|ontology_enrichment_celltype_v019=CL:0000097;5.04e-27;5!CL:0000163;2.81e-21;9!CL:0000064;6.84e-17;3!CL:0000067;6.84e-17;3!CL:0005012;6.84e-17;3!CL:0002304;6.84e-17;3!CL:1000507;5.80e-13;10!CL:1000494;5.80e-13;10!CL:0000650;6.56e-12;2!CL:1000500;6.56e-12;2!CL:1000618;6.56e-12;2!CL:1001318;6.56e-12;2!CL:0002173;6.56e-12;2!CL:1000497;1.13e-10;17!CL:0002518;1.13e-10;17!CL:0000077;1.98e-09;19!CL:1000449;1.48e-08;15!CL:0002586;5.59e-08;3|ontology_enrichment_celltype_v019_2=CL:0000097,3.06e-27,5;CL:0002028,3.06e-27,5;CL:0000163,2.25e-21,9;CL:0000064,6.17e-17,3;CL:0000067,6.17e-17,3;CL:0005012,6.17e-17,3;CL:0002304,6.17e-17,3;CL:1000507,5.97e-13,10;CL:1000494,5.97e-13,10;CL:0000650,8.83e-12,2;CL:1000500,8.83e-12,2;CL:1000618,8.83e-12,2;CL:1001318,8.83e-12,2;CL:0002173,8.83e-12,2;CL:1000497,1.15e-10,17;CL:0002518,1.15e-10,17;CL:0000077,1.69e-09,19;CL:1000449,1.51e-08,15;CL:0002586,4.23e-08,3;CL:0000066,1.91e-07,253|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007625!9.23e-10!11;UBERON:0009773!8.45e-09!12;UBERON:0001231!8.45e-09!12;UBERON:0004810!8.45e-09!12;UBERON:0000019!4.29e-08!19;UBERON:0000047!4.29e-08!19;UBERON:0004088!4.29e-08!19;UBERON:0003072!4.29e-08!19;UBERON:0003071!4.29e-08!19;UBERON:0004128!4.29e-08!19;UBERON:0000058!1.41e-07!26;UBERON:0000970!1.58e-07!20;UBERON:0004211!1.96e-07!16;UBERON:0001285!1.96e-07!16;UBERON:0007684!1.96e-07!16;UBERON:0003220!1.96e-07!16;UBERON:0004208!1.96e-07!16;UBERON:0000020!3.20e-07!23;UBERON:0000481!4.23e-07!347;UBERON:0002104!5.08e-07!21;UBERON:0001456!5.08e-07!21;UBERON:0000488!6.92e-07!4;UBERON:0006555!7.64e-07!17;UBERON:0005103!7.64e-07!17;UBERON:0000083!7.64e-07!17;UBERON:0009201!7.64e-07!17;UBERON:0004819!7.64e-07!17;UBERON:0006553!7.64e-07!17;UBERON:0003074!7.64e-07!17;UBERON:0003060!7.64e-07!17;UBERON:0001032!8.85e-07!24;UBERON:0004456!8.85e-07!24|ontology_enrichment_uberon_v019=UBERON:0001778;6.84e-17;3!UBERON:0001775;6.84e-17;3!UBERON:0007625;8.04e-17;11!UBERON:0004211;5.80e-13;10!UBERON:0009773;5.80e-13;10!UBERON:0001231;5.80e-13;10!UBERON:0004810;5.80e-13;10!UBERON:0000488;8.53e-13;4!UBERON:0003567;6.56e-12;2!UBERON:0003838;6.56e-12;2!UBERON:0003586;6.56e-12;2!UBERON:0005169;6.56e-12;2!UBERON:0002321;6.56e-12;2!UBERON:0005215;6.56e-12;2!UBERON:0002303;6.56e-12;2!UBERON:0002319;6.56e-12;2!UBERON:0000019;1.74e-09;19!UBERON:0000047;1.74e-09;19!UBERON:0004088;1.74e-09;19!UBERON:0010230;1.74e-09;19!UBERON:0000970;5.55e-09;20!UBERON:0002203;1.12e-08;6!UBERON:0001768;1.12e-08;6!UBERON:0002200;1.12e-08;6!UBERON:0006555;1.48e-08;15!UBERON:0004819;1.48e-08;15!UBERON:0001285;1.48e-08;15!UBERON:0007684;1.48e-08;15!UBERON:0002104;1.59e-08;21!UBERON:0001456;1.59e-08;21!UBERON:0001781;5.59e-08;3!UBERON:0001782;5.59e-08;3!UBERON:0000020;9.91e-08;23!UBERON:0002113;2.21e-07;24!UBERON:0001032;2.21e-07;24!UBERON:0011143;2.21e-07;24!UBERON:0004456;2.21e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0001778,6.17e-17,3;UBERON:0001775,6.17e-17,3;UBERON:0007625,7.22e-17,11;UBERON:0004810,5.97e-13,10;UBERON:0000488,7.90e-13,4;UBERON:0003567,8.83e-12,2;UBERON:0003838,8.83e-12,2;UBERON:0003586,8.83e-12,2;UBERON:0005169,8.83e-12,2;UBERON:0002321,8.83e-12,2;UBERON:0005215,8.83e-12,2;UBERON:0002303,8.83e-12,2;UBERON:0002319,8.83e-12,2;UBERON:0000019,5.25e-09,20;UBERON:0000047,5.25e-09,20;UBERON:0010312,5.25e-09,20;UBERON:0004088,5.25e-09,20;UBERON:0010230,5.25e-09,20;UBERON:0003072,5.25e-09,20;UBERON:0004128,5.25e-09,20;UBERON:0003071,5.25e-09,20;UBERON:0002203,1.06e-08,6;UBERON:0001768,1.06e-08,6;UBERON:0002200,1.06e-08,6;UBERON:0000970,1.51e-08,21;UBERON:0002104,1.51e-08,21;UBERON:0004211,1.51e-08,15;UBERON:0009773,1.51e-08,15;UBERON:0001231,1.51e-08,15;UBERON:0001285,1.51e-08,15;UBERON:0007684,1.51e-08,15;UBERON:0004208,1.51e-08,15;UBERON:0001456,3.93e-08,22;UBERON:0001782,4.23e-08,3;UBERON:0005424,4.23e-08,3;UBERON:0006555,5.39e-08,16;UBERON:0004819,5.39e-08,16;UBERON:0000020,2.11e-07,24;UBERON:0001032,2.11e-07,24;UBERON:0004456,2.11e-07,24;UBERON:00021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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3976 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6596 | |||
|TSSclassifier=W | |||
|UniProt=P15018 | |||
|association_with_transcript=-310bp_to_ENST00000249075_5end | |||
|description=CAGE_peak_3_at_LIF_5end | |||
|id=chr22:30643150..30643164,- | |||
|ontology_enrichment_celltype=CL:1000507!8.45e-09!12;CL:1000494!8.45e-09!12;CL:0000077!9.13e-09!19;CL:0002274!1.09e-08!5;CL:0000457!1.09e-08!5;CL:0002191!1.09e-08!5;CL:0000097!1.09e-08!5;CL:0000831!1.09e-08!5;CL:0002028!1.09e-08!5;CL:1000497!6.69e-08!18;CL:0002518!6.69e-08!18;CL:1000449!1.96e-07!16;CL:0000220!4.22e-07!246;CL:0002319!4.97e-07!25;CL:0002321!6.45e-07!248;CL:0000128!8.04e-07!7;CL:0000126!8.04e-07!7;CL:0000127!8.04e-07!7;CL:0002453!8.04e-07!7;CL:0000548!8.44e-07!679;CL:0000004!8.44e-07!679;CL:0000255!8.44e-07!679;CL:0000243!8.57e-07!15;CL:0000125!8.57e-07!15;CL:0000030!8.57e-07!15;CL:0000339!8.57e-07!15;CL:0000066!9.45e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000097;5.04e-27;5!CL:0000163;2.81e-21;9!CL:0000064;6.84e-17;3!CL:0000067;6.84e-17;3!CL:0005012;6.84e-17;3!CL:0002304;6.84e-17;3!CL:1000507;5.80e-13;10!CL:1000494;5.80e-13;10!CL:0000650;6.56e-12;2!CL:1000500;6.56e-12;2!CL:1000618;6.56e-12;2!CL:1001318;6.56e-12;2!CL:0002173;6.56e-12;2!CL:1000497;1.13e-10;17!CL:0002518;1.13e-10;17!CL:0000077;1.98e-09;19!CL:1000449;1.48e-08;15!CL:0002586;5.59e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.06e-27,5;CL:0002028,3.06e-27,5;CL:0000163,2.25e-21,9;CL:0000064,6.17e-17,3;CL:0000067,6.17e-17,3;CL:0005012,6.17e-17,3;CL:0002304,6.17e-17,3;CL:1000507,5.97e-13,10;CL:1000494,5.97e-13,10;CL:0000650,8.83e-12,2;CL:1000500,8.83e-12,2;CL:1000618,8.83e-12,2;CL:1001318,8.83e-12,2;CL:0002173,8.83e-12,2;CL:1000497,1.15e-10,17;CL:0002518,1.15e-10,17;CL:0000077,1.69e-09,19;CL:1000449,1.51e-08,15;CL:0002586,4.23e-08,3;CL:0000066,1.91e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007625!9.23e-10!11;UBERON:0009773!8.45e-09!12;UBERON:0001231!8.45e-09!12;UBERON:0004810!8.45e-09!12;UBERON:0000019!4.29e-08!19;UBERON:0000047!4.29e-08!19;UBERON:0004088!4.29e-08!19;UBERON:0003072!4.29e-08!19;UBERON:0003071!4.29e-08!19;UBERON:0004128!4.29e-08!19;UBERON:0000058!1.41e-07!26;UBERON:0000970!1.58e-07!20;UBERON:0004211!1.96e-07!16;UBERON:0001285!1.96e-07!16;UBERON:0007684!1.96e-07!16;UBERON:0003220!1.96e-07!16;UBERON:0004208!1.96e-07!16;UBERON:0000020!3.20e-07!23;UBERON:0000481!4.23e-07!347;UBERON:0002104!5.08e-07!21;UBERON:0001456!5.08e-07!21;UBERON:0000488!6.92e-07!4;UBERON:0006555!7.64e-07!17;UBERON:0005103!7.64e-07!17;UBERON:0000083!7.64e-07!17;UBERON:0009201!7.64e-07!17;UBERON:0004819!7.64e-07!17;UBERON:0006553!7.64e-07!17;UBERON:0003074!7.64e-07!17;UBERON:0003060!7.64e-07!17;UBERON:0001032!8.85e-07!24;UBERON:0004456!8.85e-07!24 | |||
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|short_description=p3@LIF | |||
}} |
Revision as of 11:26, 12 September 2013
Short description: | p3@LIF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LIF_5end |
Coexpression cluster: | NA |
Association with transcript: | -310bp_to_ENST00000249075_5end |
EntrezGene: | LIF |
HGNC: | 6596 |
UniProt: | P15018 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.06e-27 | 5 |
basophil mast progenitor cell | 3.06e-27 | 5 |
endocrine cell | 2.25e-21 | 9 |
ciliated cell | 6.17e-17 | 3 |
ciliated epithelial cell | 6.17e-17 | 3 |
multi-ciliated epithelial cell | 6.17e-17 | 3 |
non-pigmented ciliary epithelial cell | 6.17e-17 | 3 |
kidney tubule cell | 5.97e-13 | 10 |
nephron tubule epithelial cell | 5.97e-13 | 10 |
mesangial cell | 8.83e-12 | 2 |
kidney interstitial cell | 8.83e-12 | 2 |
juxtaglomerular complex cell | 8.83e-12 | 2 |
renal interstitial pericyte | 8.83e-12 | 2 |
extraglomerular mesangial cell | 8.83e-12 | 2 |
kidney cell | 1.15e-10 | 17 |
kidney epithelial cell | 1.15e-10 | 17 |
mesothelial cell | 1.69e-09 | 19 |
epithelial cell of nephron | 1.51e-08 | 15 |
retinal pigment epithelial cell | 4.23e-08 | 3 |
epithelial cell | 1.91e-07 | 253 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.