FFCP PHASE1:Hg19::chr2:235890016..235890054,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23677|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10826|TSSclassifier=W|UniProt=C9JED2|association_with_transcript=-213bp_to_ENST00000446904_5end|description=CAGE_peak_6_at_SH3BP4_5end|id=chr2:235890016..235890054,+|ontology_enrichment_celltype=CL:0002139!2.12e-16!24;CL:0000071!1.97e-12!18;CL:0002546!1.97e-12!18;CL:0000115!5.95e-12!35;CL:0000213!2.34e-10!57;CL:0000215!2.34e-10!57;CL:0002078!5.19e-10!44;CL:0000066!1.07e-09!254;CL:1000413!6.32e-09!9;CL:0000076!8.75e-08!62|ontology_enrichment_celltype_v019=CL:0000071;6.07e-33;18!CL:0002139;3.62e-32;24!CL:0000115;4.91e-20;36!CL:1000413;5.84e-20;9!CL:0002544;6.49e-16;6!CL:0002543;7.36e-16;6!CL:0002618;2.74e-12;3!CL:0000213;6.61e-12;58!CL:0000215;6.61e-12;58!CL:0000182;1.95e-11;12!CL:0002078;4.89e-11;45!CL:0000076;3.07e-07;63|ontology_enrichment_celltype_v019_2=CL:0000071,1.99e-33,18;CL:0002546,1.99e-33,18;CL:0002139,1.18e-32,24;CL:0000115,9.20e-24,36;CL:1000413,1.50e-20,9;CL:0002078,3.10e-18,45;CL:0000213,2.23e-17,58;CL:0000215,2.23e-17,58;CL:0002544,1.38e-16,6;CL:0002543,6.60e-16,6;CL:0002618,2.47e-12,3;CL:0000182,1.42e-11,12;CL:0000076,2.16e-10,63|ontology_enrichment_development_v019=CL:0002546;6.07e-33;18!UBERON:0004161;5.32e-17;11!UBERON:0009497;3.18e-14;13!UBERON:0007297;6.04e-09;2!UBERON:0001041;6.05e-09;30!UBERON:0003104;8.70e-07;31|ontology_enrichment_disease=DOID:305!1.23e-08!106;DOID:0050687!3.59e-08!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000477!2.93e-14!286;UBERON:0001986!1.97e-12!18;UBERON:0004638!1.97e-12!18;UBERON:0004852!1.97e-12!18;UBERON:0000487!5.72e-12!22;UBERON:0004111!8.70e-12!241;UBERON:0001007!2.36e-11!155;UBERON:0001555!2.36e-11!155;UBERON:0007026!2.36e-11!155;UBERON:0004921!4.17e-11!129;UBERON:0004185!4.17e-11!129;UBERON:0006914!9.67e-11!25;UBERON:0000077!1.71e-10!130;UBERON:0007023!2.40e-09!115;UBERON:0004119!4.47e-09!169;UBERON:0000925!4.47e-09!169;UBERON:0006595!4.47e-09!169;UBERON:0003915!6.32e-09!9;UBERON:0004700!6.32e-09!9;UBERON:0001917!6.32e-09!9;UBERON:0001041!2.21e-08!98;UBERON:0000466!5.23e-08!126;UBERON:0000468!1.11e-07!659;UBERON:0005177!4.02e-07!107;UBERON:0000025!4.02e-07!194;UBERON:0000481!4.46e-07!347;UBERON:0000467!7.57e-07!625;UBERON:0000480!9.43e-07!626|ontology_enrichment_uberon_v019=UBERON:0004638;6.07e-33;18!UBERON:0001986;6.07e-33;18!UBERON:0004852;6.07e-33;18!UBERON:0000487;9.64e-31;22!UBERON:0006914;1.17e-26;25!UBERON:0003915;5.84e-20;9!UBERON:0004700;5.84e-20;9!UBERON:0001917;5.84e-20;9!UBERON:0000490;2.62e-18;33!UBERON:0006947;8.66e-13;3!UBERON:0004054;8.66e-13;3!UBERON:0003135;3.11e-12;11!UBERON:0002365;1.22e-10;31!UBERON:0002330;1.22e-10;31!UBERON:0001638;1.77e-10;9!UBERON:0003920;1.77e-10;9!UBERON:0004582;1.77e-10;9!UBERON:0005904;1.07e-09;4!UBERON:0002107;2.80e-09;19!UBERON:0006925;2.80e-09;19!UBERON:0002423;6.84e-09;25!UBERON:0001829;7.07e-09;2!UBERON:0003101;1.04e-07;22!UBERON:0000079;1.04e-07;22!UBERON:0002066;1.53e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.99e-33,18;UBERON:0001986,1.99e-33,18;UBERON:0004852,1.99e-33,18;UBERON:0000487,3.51e-31,22;UBERON:0006914,4.84e-27,25;UBERON:0003915,1.50e-20,9;UBERON:0004700,1.50e-20,9;UBERON:0001917,1.50e-20,9;UBERON:0003914,3.08e-13,117;UBERON:0006947,7.96e-13,3;UBERON:0004054,7.96e-13,3;UBERON:0003135,3.02e-12,11;UBERON:0004111,1.61e-11,240;UBERON:0002365,7.08e-11,31;UBERON:0002330,7.08e-11,31;UBERON:0001638,1.65e-10,9;UBERON:0003920,1.65e-10,9;UBERON:0004582,1.65e-10,9;UBERON:0005904,1.00e-09,4;UBERON:0000055,2.86e-09,68;UBERON:0002107,2.90e-09,19;UBERON:0006925,2.90e-09,19;UBERON:0008836,2.90e-09,19;UBERON:0000490,3.89e-09,148;UBERON:0001829,6.73e-09,2;UBERON:0009497,7.06e-09,25;UBERON:0000015,7.06e-09,25;UBERON:0002423,7.06e-09,25;UBERON:0006235,7.06e-09,25;UBERON:0004161,7.06e-09,25;UBERON:0007499,8.84e-09,25;UBERON:0009856,2.16e-08,26;UBERON:0007500,3.42e-08,59;UBERON:0001981,3.42e-08,59;UBERON:0004537,3.42e-08,59;UBERON:0006965,3.42e-08,59;UBERON:0008835,7.31e-08,22;UBERON:0003894,7.31e-08,22;UBERON:0002049,1.15e-07,78;UBERON:0007798,1.15e-07,78;UBERON:0003101,1.23e-07,22;UBERON:0000079,1.23e-07,22;UBERON:0002066,1.44e-07,5;UBERON:0009854,1.78e-07,23;UBERON:0000025,2.39e-07,192;UBERON:0002530,4.58e-07,59|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0.331397375727916,0,0,0.730310090387373,0,0.246242116153576,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.283604451492204,0.221729397462564,0,1.17881167947941,0,0,0,0,0,0,0,0,1.98762407366705,1.72046919021225,1.73570250803797,3.39184765154406,1.25849830862972,0.825354125820202,1.46296476575767,0.516833518338658,0.35576626268671,1.67360306382335,1.20848795132744,0,0.976248230192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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23677 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10826 | |||
|TSSclassifier=W | |||
|UniProt=C9JED2 | |||
|association_with_transcript=-213bp_to_ENST00000446904_5end | |||
|description=CAGE_peak_6_at_SH3BP4_5end | |||
|id=chr2:235890016..235890054,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.12e-16!24;CL:0000071!1.97e-12!18;CL:0002546!1.97e-12!18;CL:0000115!5.95e-12!35;CL:0000213!2.34e-10!57;CL:0000215!2.34e-10!57;CL:0002078!5.19e-10!44;CL:0000066!1.07e-09!254;CL:1000413!6.32e-09!9;CL:0000076!8.75e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:0000071;6.07e-33;18!CL:0002139;3.62e-32;24!CL:0000115;4.91e-20;36!CL:1000413;5.84e-20;9!CL:0002544;6.49e-16;6!CL:0002543;7.36e-16;6!CL:0002618;2.74e-12;3!CL:0000213;6.61e-12;58!CL:0000215;6.61e-12;58!CL:0000182;1.95e-11;12!CL:0002078;4.89e-11;45!CL:0000076;3.07e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,1.99e-33,18;CL:0002546,1.99e-33,18;CL:0002139,1.18e-32,24;CL:0000115,9.20e-24,36;CL:1000413,1.50e-20,9;CL:0002078,3.10e-18,45;CL:0000213,2.23e-17,58;CL:0000215,2.23e-17,58;CL:0002544,1.38e-16,6;CL:0002543,6.60e-16,6;CL:0002618,2.47e-12,3;CL:0000182,1.42e-11,12;CL:0000076,2.16e-10,63 | |||
|ontology_enrichment_development_v019=CL:0002546;6.07e-33;18!UBERON:0004161;5.32e-17;11!UBERON:0009497;3.18e-14;13!UBERON:0007297;6.04e-09;2!UBERON:0001041;6.05e-09;30!UBERON:0003104;8.70e-07;31 | |||
|ontology_enrichment_disease=DOID:305!1.23e-08!106;DOID:0050687!3.59e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!2.93e-14!286;UBERON:0001986!1.97e-12!18;UBERON:0004638!1.97e-12!18;UBERON:0004852!1.97e-12!18;UBERON:0000487!5.72e-12!22;UBERON:0004111!8.70e-12!241;UBERON:0001007!2.36e-11!155;UBERON:0001555!2.36e-11!155;UBERON:0007026!2.36e-11!155;UBERON:0004921!4.17e-11!129;UBERON:0004185!4.17e-11!129;UBERON:0006914!9.67e-11!25;UBERON:0000077!1.71e-10!130;UBERON:0007023!2.40e-09!115;UBERON:0004119!4.47e-09!169;UBERON:0000925!4.47e-09!169;UBERON:0006595!4.47e-09!169;UBERON:0003915!6.32e-09!9;UBERON:0004700!6.32e-09!9;UBERON:0001917!6.32e-09!9;UBERON:0001041!2.21e-08!98;UBERON:0000466!5.23e-08!126;UBERON:0000468!1.11e-07!659;UBERON:0005177!4.02e-07!107;UBERON:0000025!4.02e-07!194;UBERON:0000481!4.46e-07!347;UBERON:0000467!7.57e-07!625;UBERON:0000480!9.43e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.07e-33;18!UBERON:0001986;6.07e-33;18!UBERON:0004852;6.07e-33;18!UBERON:0000487;9.64e-31;22!UBERON:0006914;1.17e-26;25!UBERON:0003915;5.84e-20;9!UBERON:0004700;5.84e-20;9!UBERON:0001917;5.84e-20;9!UBERON:0000490;2.62e-18;33!UBERON:0006947;8.66e-13;3!UBERON:0004054;8.66e-13;3!UBERON:0003135;3.11e-12;11!UBERON:0002365;1.22e-10;31!UBERON:0002330;1.22e-10;31!UBERON:0001638;1.77e-10;9!UBERON:0003920;1.77e-10;9!UBERON:0004582;1.77e-10;9!UBERON:0005904;1.07e-09;4!UBERON:0002107;2.80e-09;19!UBERON:0006925;2.80e-09;19!UBERON:0002423;6.84e-09;25!UBERON:0001829;7.07e-09;2!UBERON:0003101;1.04e-07;22!UBERON:0000079;1.04e-07;22!UBERON:0002066;1.53e-07;5 | |||
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| |||
|short_description=p6@SH3BP4 | |||
}} |
Revision as of 17:33, 12 September 2013
Short description: | p6@SH3BP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SH3BP4_5end |
Coexpression cluster: | NA |
Association with transcript: | -213bp_to_ENST00000446904_5end |
EntrezGene: | SH3BP4 |
HGNC: | 10826 |
UniProt: | C9JED2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 1.99e-33 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.99e-33 | 18 |
endothelial cell of vascular tree | 1.18e-32 | 24 |
endothelial cell | 9.20e-24 | 36 |
endothelial cell of artery | 1.50e-20 | 9 |
meso-epithelial cell | 3.10e-18 | 45 |
lining cell | 2.23e-17 | 58 |
barrier cell | 2.23e-17 | 58 |
aortic endothelial cell | 1.38e-16 | 6 |
vein endothelial cell | 6.60e-16 | 6 |
endothelial cell of umbilical vein | 2.47e-12 | 3 |
hepatocyte | 1.42e-11 | 12 |
squamous epithelial cell | 2.16e-10 | 63 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.