FFCP PHASE1:Hg19::chr2:224856561..224856577,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C354|description=CAGE_peak_at_chr2:224856561..224856577,-|id=chr2:224856561..224856577,-|ontology_enrichment_celltype=CL:0000055!3.96e-20!180;CL:0000057!6.07e-15!75;CL:0002620!5.81e-10!23|ontology_enrichment_celltype_v019=CL:0002620;7.94e-12;23!CL:0000499;4.01e-07;28!CL:0000134;8.36e-07;55|ontology_enrichment_celltype_v019_2=CL:0000057,3.85e-17,76;CL:0002620,7.56e-12,23;CL:0000499,3.06e-07,28;CL:0000723,9.65e-07,433|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!6.51e-10!365;UBERON:0003102!6.27e-09!95;UBERON:0002199!1.49e-08!45;UBERON:0002416!1.49e-08!45;UBERON:0002097!1.66e-08!40;UBERON:0000468!3.78e-08!659;UBERON:0000486!9.07e-08!82|ontology_enrichment_uberon_v019=UBERON:0002097;1.47e-10;41!UBERON:0002199;1.08e-08;46!UBERON:0002416;1.08e-08;46!UBERON:0004457;5.17e-08;9!UBERON:0000042;5.17e-08;9!UBERON:0003688;4.83e-07;6!UBERON:0002358;4.83e-07;6!UBERON:0003684;4.83e-07;6!UBERON:0001178;4.83e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.25e-13,41;UBERON:0002199,3.09e-13,46;UBERON:0002416,3.09e-13,46;UBERON:0003102,2.11e-10,99;UBERON:0004923,4.82e-09,66;UBERON:0003688,5.43e-07,6;UBERON:0002358,5.43e-07,6;UBERON:0003684,5.43e-07,6;UBERON:0001178,5.43e-07,6|phase1_expression=4.54195948176392,9.20632252731228,3.66481450649525,8.00586386825043,2.23480547213644,40.9999106327173,0,1.89515962028049,0.261185628199839,0,0,0,0.527533956456907,1.60896258848061,5.96515276310248,1.34465029290355,0,2.19093027116212,0,0,0.612002073732759,0.940364164434263,0,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0.919421224478927,1.50602959389125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,3.97583067623023,0.50133791063589,13.181033225435,4.7717156823066,35.5243455320924,0.189069634328136,0,0.175669571386252,0.523916301990851,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,17.8909902610315,12.663051166458,3.97227542439656,50.77008187254,12.7680617591409,6.16745360156538,0,3.20667812942308,0.311211035399766,0.67355336034844,0.653847612453835,0,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,7.62188270814185,1.64408298101271,1.61872944368132,1.12360645361799,1.02077085627447,2.21101771161182,1.23990937410919,1.18800285728205,6.92347401979959,0,0.718618141816238,0,1.00094815897571,0,0.438977620880838,7.35570709917647,3.90618953157152,0.680593098960126,4.84352016359927,2.77624605464138,2.11931901159562,12.3037349394605,6.90451945897541,7.72921620136887,4.09457083929498,1.5189869901714,4.87185025805993,1.26216887122057,4.14224543890347,3.87950536365149,14.9104028856978,7.85866366175594,0.508681776931463,1.93260853163297,0.818238361772504,0.573609190778008,0.487894824518382,0,0.929551542956147,0.725627385107593,0.756962552626885,0.36497735907583,6.25798129319264,23.7999147131368,0,2.3218396401599,4.33127689001751,0.354920400119532,0.505754070234305,0.723033089650446,0.330881918197182,0.217879444092406,0.71181185733329,0.134831308160164,0,1.15424147083917,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,3.18275827685014,0,3.01586917234893,1.20364978706088,0,0,0,0.115930404975077,0.234817388471643,0.288732895522148,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0.283550194484773,1.07470227243418,0.581267877027924,0.383382679165211,0,0,0,0,0,0.190493682876507,0.381988425558278,1.17217447210047,0,7.09509699652932,2.70308752059526,0.571652865261156,0.336393253036082,0,0.22001485746285,3.74887975697556,0,0,2.39344304926383,0,0,0,1.5985330740966,0.142977993658148,1.08524321078289,0,0,0,3.16780749173372,1.50719688529793,0.871533458600294,0.799783929456456,0,0,0,0,0,1.42636905040718,12.3064110667442,26.0954929638987,0.537182889719687,0.112085143993527,0,0,0,0.254094624222463,0,0.773288812777695,1.17261385734044,1.91381625495949,0,0,0,1.71768088406796,3.50119364741774,1.89885516589815,2.28767947683888,14.0958901149758,4.41566762095017,4.33423235473039,0.601892199455438,0,3.10419213877515,0,0.184369168541703,14.0751455438294,0,0,0,0,0,0,0,0.30239029332968,9.42809669711352,0.460385919864187,10.6650835884568,19.0927332390994,3.07024349440022,26.5408969886952,40.0728779401476,0.154209693802656,3.37367278094941,0.0821271560138091,3.11552657510173,0.581051892299796,0,22.4567246739679,0.644566922551274,2.18147451512753,6.3731908802351,4.72047893853927,0,0.693138033939733,0,1.46139224653261,0.527758144464379,1.13733384070897,0,0.215915916102139,0,0.812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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C354 | |||
|description=CAGE_peak_at_chr2:224856561..224856577,- | |||
|id=chr2:224856561..224856577,- | |||
|ontology_enrichment_celltype=CL:0000055!3.96e-20!180;CL:0000057!6.07e-15!75;CL:0002620!5.81e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;7.94e-12;23!CL:0000499;4.01e-07;28!CL:0000134;8.36e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.85e-17,76;CL:0002620,7.56e-12,23;CL:0000499,3.06e-07,28;CL:0000723,9.65e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.51e-10!365;UBERON:0003102!6.27e-09!95;UBERON:0002199!1.49e-08!45;UBERON:0002416!1.49e-08!45;UBERON:0002097!1.66e-08!40;UBERON:0000468!3.78e-08!659;UBERON:0000486!9.07e-08!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.47e-10;41!UBERON:0002199;1.08e-08;46!UBERON:0002416;1.08e-08;46!UBERON:0004457;5.17e-08;9!UBERON:0000042;5.17e-08;9!UBERON:0003688;4.83e-07;6!UBERON:0002358;4.83e-07;6!UBERON:0003684;4.83e-07;6!UBERON:0001178;4.83e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.25e-13,41;UBERON:0002199,3.09e-13,46;UBERON:0002416,3.09e-13,46;UBERON:0003102,2.11e-10,99;UBERON:0004923,4.82e-09,66;UBERON:0003688,5.43e-07,6;UBERON:0002358,5.43e-07,6;UBERON:0003684,5.43e-07,6;UBERON:0001178,5.43e-07,6 | |||
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| |||
|short_description=p@chr2:224856561..224856577,- | |||
}} |
Revision as of 17:07, 12 September 2013
Short description: | p@chr2:224856561..224856577, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:224856561..224856577, - |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.85e-17 | 76 |
skin fibroblast | 7.56e-12 | 23 |
stromal cell | 3.06e-07 | 28 |
somatic stem cell | 9.65e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.25e-13 | 41 |
integument | 3.09e-13 | 46 |
integumental system | 3.09e-13 | 46 |
surface structure | 2.11e-10 | 99 |
organ component layer | 4.82e-09 | 66 |
omentum | 5.43e-07 | 6 |
peritoneum | 5.43e-07 | 6 |
abdominal cavity | 5.43e-07 | 6 |
visceral peritoneum | 5.43e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.