FFCP PHASE1:Hg19::chr2:223288700..223288713,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=130367|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=19953|TSSclassifier=S|UniProt=Q8IWX5|association_with_transcript=-57bp_to_AK096323_5end|coexpression_cluster_id=C0|description=CAGE_peak_3_at_SGPP2_5end|id=chr2:223288700..223288713,+|ontology_enrichment_celltype=CL:0002194!3.04e-21!63;CL:0000576!3.04e-21!63;CL:0000040!3.04e-21!63;CL:0000559!3.04e-21!63;CL:0002057!9.88e-21!42;CL:0002009!3.82e-20!65;CL:0000860!1.13e-19!45;CL:0002087!1.41e-19!119;CL:0000839!1.09e-17!70;CL:0000557!3.06e-17!71;CL:0002031!1.07e-15!124;CL:0000766!3.37e-15!76;CL:0000738!9.74e-14!140;CL:0000988!2.52e-08!182;CL:0002032!4.28e-08!165;CL:0000837!4.28e-08!165;CL:0000037!5.25e-08!172;CL:0000566!5.25e-08!172|ontology_enrichment_celltype_v019=CL:0000860;9.44e-44;33!CL:0002057;9.44e-44;33!CL:0000473;3.38e-35;39!CL:0000234;3.38e-35;39!CL:0000576;1.91e-26;48!CL:0000766;5.64e-18;69!CL:0002087;1.48e-10;104!CL:1000507;6.35e-10;10!CL:1000494;6.35e-10;10!CL:0000763;6.89e-07;100|ontology_enrichment_celltype_v019_2=CL:0000473,5.92e-46,48;CL:0000234,5.92e-46,48;CL:0000860,6.15e-46,42;CL:0002057,6.15e-46,42;CL:0002194,8.74e-38,59;CL:0000576,8.74e-38,59;CL:0000040,8.74e-38,59;CL:0000559,8.74e-38,59;CL:0002009,2.65e-36,61;CL:0000839,5.50e-33,66;CL:0000557,2.21e-32,67;CL:0000766,1.31e-29,72;CL:0002087,8.27e-25,115;CL:0002031,2.14e-23,120;CL:0000738,1.40e-19,136;CL:0000763,3.18e-17,108;CL:0000049,3.18e-17,108;CL:0000988,2.79e-16,177;CL:0002032,3.74e-15,161;CL:0000837,3.74e-15,161;CL:0000037,3.72e-14,168;CL:1000507,6.69e-10,10;CL:1000494,6.69e-10,10|ontology_enrichment_development_v019=CL:0002057;3.15e-34;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.62e-15!102;UBERON:0003061!1.62e-15!102;UBERON:0001049!8.82e-15!57;UBERON:0005068!8.82e-15!57;UBERON:0006241!8.82e-15!57;UBERON:0007135!8.82e-15!57;UBERON:0002371!9.12e-14!80;UBERON:0002193!1.77e-13!112;UBERON:0002020!1.47e-12!34;UBERON:0003528!1.47e-12!34;UBERON:0001893!2.81e-12!34;UBERON:0002780!5.22e-12!41;UBERON:0001890!5.22e-12!41;UBERON:0006240!5.22e-12!41;UBERON:0002616!5.58e-12!59;UBERON:0001474!6.76e-12!86;UBERON:0002791!1.19e-11!33;UBERON:0007023!1.39e-11!115;UBERON:0003080!1.57e-11!42;UBERON:0001869!4.74e-11!32;UBERON:0000955!3.08e-10!69;UBERON:0006238!3.08e-10!69;UBERON:0003075!3.24e-10!86;UBERON:0007284!3.24e-10!86;UBERON:0000062!1.01e-09!511;UBERON:0004765!2.06e-09!101;UBERON:0001434!2.06e-09!101;UBERON:0002346!3.00e-09!90;UBERON:0002405!4.02e-09!115;UBERON:0001017!6.65e-09!82;UBERON:0002619!1.17e-08!22;UBERON:0000153!2.67e-08!129;UBERON:0007811!2.67e-08!129;UBERON:0005743!5.12e-08!86;UBERON:0000956!5.33e-08!25;UBERON:0000203!5.33e-08!25;UBERON:0003056!6.26e-08!61;UBERON:0000033!9.58e-08!123;UBERON:0001950!2.02e-07!20|ontology_enrichment_uberon_v019=UBERON:0004211;6.35e-10;10!UBERON:0009773;6.35e-10;10!UBERON:0001231;6.35e-10;10!UBERON:0004810;6.35e-10;10!UBERON:0002113;2.42e-08;24!UBERON:0011143;2.42e-08;24!UBERON:0000489;3.52e-08;29!UBERON:0006554;7.62e-08;30!UBERON:0001008;7.62e-08;30|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.18e-27,76;UBERON:0002390,7.78e-27,98;UBERON:0003061,7.78e-27,98;UBERON:0001474,4.47e-25,82;UBERON:0002193,1.49e-23,108;UBERON:0002405,6.36e-23,93;UBERON:0004765,3.57e-22,90;UBERON:0001434,3.34e-19,100;UBERON:0004810,6.69e-10,10;UBERON:0003081,1.15e-08,203;UBERON:0002204,1.33e-08,167;UBERON:0002113,1.58e-07,26;UBERON:0003918,1.58e-07,26;UBERON:0011143,1.58e-07,26;UBERON:0005095,1.58e-07,26;UBERON:0007687,1.58e-07,26;UBERON:0000489,1.81e-07,31|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,4.20273731613732,3.85872770414745,3.62069594042925,0,0,0,0,0,0,0,0.426507697462265,0,1.10799081706375,1.40381113229099,1.95309783644267,1.11957737119962,0.647787332037959,0.515151135268373,0.436194716338694,0,0.242584061187816,10.2268776238501,12.3350366406548,23.2279778171328,13.2338500468189,3.58624989140741,8.27687804610048,22.4084692478802,29.692295444856,23.0225027210381,2.82363509313907,4.36649840092553,8.53949240891322,14.3859429414324,17.3301674621091,21.0981251513684,0.329851300186716,0,0,68.4893803163458,61.2776042666431,82.8353591164115,2.00998932205395,0.521482918420201,2.6062661364614,50.853558221203,62.607198117886,76.2674353732532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,0,0,0,1.68152568894461,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,1.14721838155602,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=130367 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=19953 | |||
|TSSclassifier=S | |||
|UniProt=Q8IWX5 | |||
|association_with_transcript=-57bp_to_AK096323_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_3_at_SGPP2_5end | |||
|id=chr2:223288700..223288713,+ | |||
|ontology_enrichment_celltype=CL:0002194!3.04e-21!63;CL:0000576!3.04e-21!63;CL:0000040!3.04e-21!63;CL:0000559!3.04e-21!63;CL:0002057!9.88e-21!42;CL:0002009!3.82e-20!65;CL:0000860!1.13e-19!45;CL:0002087!1.41e-19!119;CL:0000839!1.09e-17!70;CL:0000557!3.06e-17!71;CL:0002031!1.07e-15!124;CL:0000766!3.37e-15!76;CL:0000738!9.74e-14!140;CL:0000988!2.52e-08!182;CL:0002032!4.28e-08!165;CL:0000837!4.28e-08!165;CL:0000037!5.25e-08!172;CL:0000566!5.25e-08!172 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.44e-44;33!CL:0002057;9.44e-44;33!CL:0000473;3.38e-35;39!CL:0000234;3.38e-35;39!CL:0000576;1.91e-26;48!CL:0000766;5.64e-18;69!CL:0002087;1.48e-10;104!CL:1000507;6.35e-10;10!CL:1000494;6.35e-10;10!CL:0000763;6.89e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.92e-46,48;CL:0000234,5.92e-46,48;CL:0000860,6.15e-46,42;CL:0002057,6.15e-46,42;CL:0002194,8.74e-38,59;CL:0000576,8.74e-38,59;CL:0000040,8.74e-38,59;CL:0000559,8.74e-38,59;CL:0002009,2.65e-36,61;CL:0000839,5.50e-33,66;CL:0000557,2.21e-32,67;CL:0000766,1.31e-29,72;CL:0002087,8.27e-25,115;CL:0002031,2.14e-23,120;CL:0000738,1.40e-19,136;CL:0000763,3.18e-17,108;CL:0000049,3.18e-17,108;CL:0000988,2.79e-16,177;CL:0002032,3.74e-15,161;CL:0000837,3.74e-15,161;CL:0000037,3.72e-14,168;CL:1000507,6.69e-10,10;CL:1000494,6.69e-10,10 | |||
|ontology_enrichment_development_v019=CL:0002057;3.15e-34;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.62e-15!102;UBERON:0003061!1.62e-15!102;UBERON:0001049!8.82e-15!57;UBERON:0005068!8.82e-15!57;UBERON:0006241!8.82e-15!57;UBERON:0007135!8.82e-15!57;UBERON:0002371!9.12e-14!80;UBERON:0002193!1.77e-13!112;UBERON:0002020!1.47e-12!34;UBERON:0003528!1.47e-12!34;UBERON:0001893!2.81e-12!34;UBERON:0002780!5.22e-12!41;UBERON:0001890!5.22e-12!41;UBERON:0006240!5.22e-12!41;UBERON:0002616!5.58e-12!59;UBERON:0001474!6.76e-12!86;UBERON:0002791!1.19e-11!33;UBERON:0007023!1.39e-11!115;UBERON:0003080!1.57e-11!42;UBERON:0001869!4.74e-11!32;UBERON:0000955!3.08e-10!69;UBERON:0006238!3.08e-10!69;UBERON:0003075!3.24e-10!86;UBERON:0007284!3.24e-10!86;UBERON:0000062!1.01e-09!511;UBERON:0004765!2.06e-09!101;UBERON:0001434!2.06e-09!101;UBERON:0002346!3.00e-09!90;UBERON:0002405!4.02e-09!115;UBERON:0001017!6.65e-09!82;UBERON:0002619!1.17e-08!22;UBERON:0000153!2.67e-08!129;UBERON:0007811!2.67e-08!129;UBERON:0005743!5.12e-08!86;UBERON:0000956!5.33e-08!25;UBERON:0000203!5.33e-08!25;UBERON:0003056!6.26e-08!61;UBERON:0000033!9.58e-08!123;UBERON:0001950!2.02e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;6.35e-10;10!UBERON:0009773;6.35e-10;10!UBERON:0001231;6.35e-10;10!UBERON:0004810;6.35e-10;10!UBERON:0002113;2.42e-08;24!UBERON:0011143;2.42e-08;24!UBERON:0000489;3.52e-08;29!UBERON:0006554;7.62e-08;30!UBERON:0001008;7.62e-08;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.18e-27,76;UBERON:0002390,7.78e-27,98;UBERON:0003061,7.78e-27,98;UBERON:0001474,4.47e-25,82;UBERON:0002193,1.49e-23,108;UBERON:0002405,6.36e-23,93;UBERON:0004765,3.57e-22,90;UBERON:0001434,3.34e-19,100;UBERON:0004810,6.69e-10,10;UBERON:0003081,1.15e-08,203;UBERON:0002204,1.33e-08,167;UBERON:0002113,1.58e-07,26;UBERON:0003918,1.58e-07,26;UBERON:0011143,1.58e-07,26;UBERON:0005095,1.58e-07,26;UBERON:0007687,1.58e-07,26;UBERON:0000489,1.81e-07,31 | |||
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| |||
|short_description=p3@SGPP2 | |||
}} |
Revision as of 17:04, 12 September 2013
Short description: | p3@SGPP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SGPP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -57bp_to_AK096323_5end |
EntrezGene: | SGPP2 |
HGNC: | 19953 |
UniProt: | Q8IWX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.92e-46 | 48 |
phagocyte | 5.92e-46 | 48 |
classical monocyte | 6.15e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.15e-46 | 42 |
monopoietic cell | 8.74e-38 | 59 |
monocyte | 8.74e-38 | 59 |
monoblast | 8.74e-38 | 59 |
promonocyte | 8.74e-38 | 59 |
macrophage dendritic cell progenitor | 2.65e-36 | 61 |
myeloid lineage restricted progenitor cell | 5.50e-33 | 66 |
granulocyte monocyte progenitor cell | 2.21e-32 | 67 |
myeloid leukocyte | 1.31e-29 | 72 |
nongranular leukocyte | 8.27e-25 | 115 |
hematopoietic lineage restricted progenitor cell | 2.14e-23 | 120 |
leukocyte | 1.40e-19 | 136 |
myeloid cell | 3.18e-17 | 108 |
common myeloid progenitor | 3.18e-17 | 108 |
hematopoietic cell | 2.79e-16 | 177 |
hematopoietic oligopotent progenitor cell | 3.74e-15 | 161 |
hematopoietic multipotent progenitor cell | 3.74e-15 | 161 |
hematopoietic stem cell | 3.72e-14 | 168 |
kidney tubule cell | 6.69e-10 | 10 |
nephron tubule epithelial cell | 6.69e-10 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.18e-27 | 76 |
hematopoietic system | 7.78e-27 | 98 |
blood island | 7.78e-27 | 98 |
bone element | 4.47e-25 | 82 |
hemolymphoid system | 1.49e-23 | 108 |
immune system | 6.36e-23 | 93 |
skeletal element | 3.57e-22 | 90 |
skeletal system | 3.34e-19 | 100 |
nephron tubule epithelium | 6.69e-10 | 10 |
lateral plate mesoderm | 1.15e-08 | 203 |
musculoskeletal system | 1.33e-08 | 167 |
kidney | 1.58e-07 | 26 |
kidney mesenchyme | 1.58e-07 | 26 |
upper urinary tract | 1.58e-07 | 26 |
kidney rudiment | 1.58e-07 | 26 |
kidney field | 1.58e-07 | 26 |
cavitated compound organ | 1.81e-07 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.