FFCP PHASE1:Hg19::chr2:219433648..219433655,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9125|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10445|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000489687_5end|coexpression_cluster_id=C4185|description=CAGE_peak_6_at_RQCD1_5end|id=chr2:219433648..219433655,+|ontology_enrichment_celltype=CL:0000066!2.75e-08!254|ontology_enrichment_celltype_v019=CL:0002322;4.59e-09;5|ontology_enrichment_celltype_v019_2=CL:0002322,4.79e-09,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!2.92e-20!239;DOID:162!1.04e-19!235;DOID:0050687!1.19e-14!143;DOID:305!5.96e-12!106;DOID:0050686!1.61e-08!137|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:14566,1.26e-08,239;DOID:162,2.48e-08,235;DOID:0050687,9.11e-08,143|ontology_enrichment_uberon=UBERON:0000073!2.25e-10!94;UBERON:0001016!2.25e-10!94;UBERON:0005743!3.11e-09!86;UBERON:0001017!1.03e-08!82;UBERON:0001049!4.55e-08!57;UBERON:0005068!4.55e-08!57;UBERON:0006241!4.55e-08!57;UBERON:0007135!4.55e-08!57;UBERON:0000955!1.62e-07!69;UBERON:0006238!1.62e-07!69;UBERON:0002616!5.38e-07!59|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.27e-07,89|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0.263766978228454,0,0.331397375727916,0,0,0,0.487932798790507,0.61560529038394,0.816002764977012,0,0.286235987131057,0.273748850145768,0.251085279189606,0.458480434487708,1.23150884174919,0.787107813136792,0.393364276848904,0.383829398097213,0.154816123316076,2.75826367343678,1.50602959389125,0,2.86628642147116,1.9903692548239,0.293600439334847,0,0.200544447470142,0.651032612147555,0,0,0.257575567634187,0.290796477559129,0,0.485168122375632,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.641858054152187,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0.212604299965044,0.209658645508376,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0.954053754535364,0.569212969109448,0.587237189370939,0,1.32171328579026,1.68152568894461,0.263384084775077,0.196709770113833,0,0.411202997999018,0,0,0,0,0.222820913770347,0.294605907474837,0,0.541607727530031,0.512365278902701,0.260118695119756,0,0.552700035571697,0.579606171470105,0.296573126324121,0,0,0,0,0.34362744548263,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0.821127996921047,0.604820229674197,0,0,0,0.670700859703636,0,0.722878304769133,0.50133791063589,0,0,0,1.41802225746102,0.221729397462564,1.05401742831751,0.392937226493138,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.198762407366705,0,0.694281003215189,1.13061588384802,1.67799774483962,0.550236083880135,0.417989933073621,1.29208379584664,2.13459757612026,0.33472061276467,0.402829317109147,0,0,0.735326160691737,0,2.05389375053383,1.34717623575702,0.225222960966644,0,0.949265659568129,0.916008719652036,0,0,0,0,0.379891534993739,0.264818361626438,0,0.354668382198357,1.68203280042692,0,0,0,0.942974704487816,0.490385709340376,0.756787138224657,1.15235184896,0.70296429550139,0.312160076830321,0.570471821544449,0.448346041655403,0.587172493218824,0.161872944368132,0.561803226808994,0,0,0.103325781175765,1.18800285728205,0,0,0.718618141816238,0.673344455816265,0,0.277064115484183,0,0.30648779579902,0,0.113432183160021,0.358779271377724,0.213557388818567,0.211931901159562,0,0.206105058476878,0,0,0.506328996723799,0.0974370051611986,0.504867548488229,0,0.161646056818812,0,0.201504196455281,0.508681776931463,0.386521706326594,0,0,6.34263271873896,8.21684563593209,5.92589108634544,4.66474747569167,6.56034212276634,7.66452454059243,0,0.643240938192885,0,0,0,0.591534000199219,0.505754070234305,0.241011029883482,0.882351781859152,1.08939722046203,0.71181185733329,1.21348177344148,0.392442930250692,0,0.738155454624648,0,1.6462960453256,1.47008711385542,0,0,0.590789906681404,0.882926198829301,1.47586126251736,0,0.219500570817251,0,0.301586917234893,0.277765335475589,0.651616610620649,0,0,1.507095264676,0.352226082707465,0.721832238805369,0.462985512576611,0.570762456703795,0,0.858486162094873,0,0.234004265139238,0,0,0.335964256397719,0,0.716468181622786,0.290633938513962,0.766765358330422,3.94130590316755,0.792435906119034,0.829312462163088,0.432359860250884,0.37872730027914,1.65094525159639,1.90994212779139,1.17217447210047,1.71072446022705,0.822619941626588,0.600686115687835,0.285826432630578,1.90622843387113,0.43596006883328,1.98013371716565,0,0,0,1.32969058292435,0,0,0,0.532844358032199,0.428933980974443,1.08524321078289,0.823240336780769,0,1.42156779497018,0,0.301439377059586,0,0.099972991182057,1.2162378064119,0,0,0.239624855491583,0,0,0.289562613335158,0.61642896765115,0.179060963239896,6.72510863961164,0.591092280605782,0.431255149719035,0.385029108839245,1.77866236955724,2.60279707715243,0,0,0,0,0,0,0,0,0.542530047399471,0,0.178428988797162,0.315404830067869,0.117141414992713,0,0,0,0,0,0.173767228936166,0.783204629850962,0,0,0,0.320182673410333,0,0,0.30239029332968,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9125 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10445 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000489687_5end | |||
|coexpression_cluster_id=C4185 | |||
|description=CAGE_peak_6_at_RQCD1_5end | |||
|id=chr2:219433648..219433655,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.75e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.59e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.79e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.92e-20!239;DOID:162!1.04e-19!235;DOID:0050687!1.19e-14!143;DOID:305!5.96e-12!106;DOID:0050686!1.61e-08!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.26e-08,239;DOID:162,2.48e-08,235;DOID:0050687,9.11e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.25e-10!94;UBERON:0001016!2.25e-10!94;UBERON:0005743!3.11e-09!86;UBERON:0001017!1.03e-08!82;UBERON:0001049!4.55e-08!57;UBERON:0005068!4.55e-08!57;UBERON:0006241!4.55e-08!57;UBERON:0007135!4.55e-08!57;UBERON:0000955!1.62e-07!69;UBERON:0006238!1.62e-07!69;UBERON:0002616!5.38e-07!59 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.27e-07,89 | |||
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| |||
|short_description=p6@RQCD1 | |||
}} |
Revision as of 16:52, 12 September 2013
Short description: | p6@RQCD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RQCD1_5end |
Coexpression cluster: | C4185_teratocarcinoma_iPS_H9_HES3GFP_NK_diffuse_rhabdomyosarcoma |
Association with transcript: | 0bp_to_ENST00000489687_5end |
EntrezGene: | RQCD1 |
HGNC: | 10445 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.79e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.27e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.26e-08 | 239 |
cancer | 2.48e-08 | 235 |
cell type cancer | 9.11e-08 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.