FFCP PHASE1:Hg19::chr2:201171049..201171056,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26010|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24574|TSSclassifier=S|UniProt=|association_with_transcript=-42bp_to_ENST00000451764_5end|coexpression_cluster_id=C55|description=CAGE_peak_17_at_SPATS2L_5end|id=chr2:201171049..201171056,+|ontology_enrichment_celltype=CL:0000181!1.47e-12!12;CL:0000417!1.47e-12!12;CL:0000668!1.47e-12!12;CL:0000414!1.47e-12!12;CL:0000412!1.47e-12!12;CL:0000182!1.47e-12!12;CL:0002552!2.70e-07!5|ontology_enrichment_celltype_v019=CL:0000182;7.31e-45;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.41e-44,12;CL:0000223,2.41e-11,58|ontology_enrichment_development_v019=UBERON:0009497;5.17e-54;13!UBERON:0004161;5.60e-49;11!UBERON:0001041;5.44e-23;30!UBERON:0003104;8.16e-22;31!CL:0000223;2.23e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:7;7.44e-09;39!DOID:3493;9.01e-07;2!DOID:3307;9.01e-07;2|ontology_enrichment_disease_v019_2=DOID:7,5.85e-10,39;DOID:3307,6.80e-07,2;DOID:3493,7.61e-07,2|ontology_enrichment_uberon=UBERON:0009497!1.74e-18!25;UBERON:0000015!1.74e-18!25;UBERON:0002423!1.74e-18!25;UBERON:0006235!1.74e-18!25;UBERON:0004161!1.74e-18!25;UBERON:0008835!2.55e-16!22;UBERON:0003894!2.55e-16!22;UBERON:0009854!1.88e-15!23;UBERON:0003929!2.98e-15!54;UBERON:0001007!5.74e-15!155;UBERON:0001555!5.74e-15!155;UBERON:0007026!5.74e-15!155;UBERON:0002107!6.19e-14!19;UBERON:0006925!6.19e-14!19;UBERON:0008836!6.19e-14!19;UBERON:0007499!6.25e-14!25;UBERON:0009856!2.94e-13!26;UBERON:0004119!8.38e-13!169;UBERON:0000925!8.38e-13!169;UBERON:0006595!8.38e-13!169;UBERON:0005057!8.62e-13!26;UBERON:0004921!8.78e-13!129;UBERON:0004185!8.78e-13!129;UBERON:0005911!5.94e-11!82;UBERON:0002365!2.13e-10!31;UBERON:0002330!2.13e-10!31;UBERON:0000077!6.16e-10!130;UBERON:0005172!1.96e-09!55;UBERON:0005173!1.96e-09!55;UBERON:0002530!2.78e-08!59;UBERON:0002417!4.71e-08!61;UBERON:0000916!4.71e-08!61;UBERON:0001041!7.17e-08!98;UBERON:0003104!8.05e-08!238;UBERON:0009142!8.05e-08!238;UBERON:0000481!8.10e-08!347;UBERON:0002368!2.02e-07!35;UBERON:0000490!7.91e-07!138|ontology_enrichment_uberon_v019=UBERON:0002107;2.89e-46;19!UBERON:0006925;2.89e-46;19!UBERON:0002423;3.23e-43;25!UBERON:0002365;3.95e-27;31!UBERON:0002330;3.95e-27;31!UBERON:0002368;2.96e-23;33!UBERON:0000949;2.30e-14;43!UBERON:0005172;3.27e-13;52!UBERON:0005173;3.27e-13;52!UBERON:0002417;1.17e-09;58!UBERON:0000916;1.17e-09;58!UBERON:0002530;3.12e-08;57!UBERON:0001007;5.12e-08;81|ontology_enrichment_uberon_v019_2=UBERON:0008835,5.11e-49,22;UBERON:0003894,5.11e-49,22;UBERON:0009854,7.72e-47,23;UBERON:0002107,5.19e-46,19;UBERON:0006925,5.19e-46,19;UBERON:0008836,5.19e-46,19;UBERON:0007499,5.30e-43,25;UBERON:0009497,5.30e-43,25;UBERON:0000015,5.30e-43,25;UBERON:0002423,5.30e-43,25;UBERON:0006235,5.30e-43,25;UBERON:0004161,5.30e-43,25;UBERON:0009856,2.64e-41,26;UBERON:0002365,7.81e-28,31;UBERON:0002330,7.81e-28,31;UBERON:0002368,1.54e-24,35;UBERON:0003929,2.57e-23,54;UBERON:0005172,3.23e-19,54;UBERON:0005173,3.23e-19,54;UBERON:0000949,7.43e-19,45;UBERON:0002417,3.62e-17,60;UBERON:0000916,3.62e-17,60;UBERON:0005911,7.44e-15,82;UBERON:0002530,3.99e-14,59;UBERON:0001041,1.85e-11,87;UBERON:0004921,9.26e-10,118;UBERON:0005177,1.16e-09,101;UBERON:0001007,3.21e-09,145;UBERON:0001555,3.21e-09,145;UBERON:0007026,3.21e-09,145;UBERON:0009569,1.41e-08,112;UBERON:0004119,3.38e-08,160;UBERON:0000925,3.38e-08,160;UBERON:0006595,3.38e-08,160;UBERON:0003914,3.59e-08,117;UBERON:0005256,8.83e-08,122;UBERON:0000490,1.54e-07,148;UBERON:0003104,7.14e-07,160;UBERON:0009142,7.14e-07,160|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0,0.207322110030741,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,2.36315962672562,0,1.22988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.483437798366489,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0.0962221127255121,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0,0,3.58042349351218,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0.144090417154106,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,4.09672547997563,4.53287221096415,5.86410831531409,1.08270229666224,0,0,0,0,0,0,0,0,0,0,1.89133697518076,0.524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,2.05173127149315,1.32506888912221,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,1.46301509978723,0,0,0,0,0,0,0,0,0,0.301925687133347,0.540219106755613,0.218559560503957,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0.332660356546013,0,0,1.9307228228694,0,0,0,0,0,0,0|short_description=p17@SPATS2L}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=26010 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24574 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-42bp_to_ENST00000451764_5end | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_17_at_SPATS2L_5end | |||
|id=chr2:201171049..201171056,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.47e-12!12;CL:0000417!1.47e-12!12;CL:0000668!1.47e-12!12;CL:0000414!1.47e-12!12;CL:0000412!1.47e-12!12;CL:0000182!1.47e-12!12;CL:0002552!2.70e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.31e-45;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.41e-44,12;CL:0000223,2.41e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;5.17e-54;13!UBERON:0004161;5.60e-49;11!UBERON:0001041;5.44e-23;30!UBERON:0003104;8.16e-22;31!CL:0000223;2.23e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;7.44e-09;39!DOID:3493;9.01e-07;2!DOID:3307;9.01e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:7,5.85e-10,39;DOID:3307,6.80e-07,2;DOID:3493,7.61e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0009497!1.74e-18!25;UBERON:0000015!1.74e-18!25;UBERON:0002423!1.74e-18!25;UBERON:0006235!1.74e-18!25;UBERON:0004161!1.74e-18!25;UBERON:0008835!2.55e-16!22;UBERON:0003894!2.55e-16!22;UBERON:0009854!1.88e-15!23;UBERON:0003929!2.98e-15!54;UBERON:0001007!5.74e-15!155;UBERON:0001555!5.74e-15!155;UBERON:0007026!5.74e-15!155;UBERON:0002107!6.19e-14!19;UBERON:0006925!6.19e-14!19;UBERON:0008836!6.19e-14!19;UBERON:0007499!6.25e-14!25;UBERON:0009856!2.94e-13!26;UBERON:0004119!8.38e-13!169;UBERON:0000925!8.38e-13!169;UBERON:0006595!8.38e-13!169;UBERON:0005057!8.62e-13!26;UBERON:0004921!8.78e-13!129;UBERON:0004185!8.78e-13!129;UBERON:0005911!5.94e-11!82;UBERON:0002365!2.13e-10!31;UBERON:0002330!2.13e-10!31;UBERON:0000077!6.16e-10!130;UBERON:0005172!1.96e-09!55;UBERON:0005173!1.96e-09!55;UBERON:0002530!2.78e-08!59;UBERON:0002417!4.71e-08!61;UBERON:0000916!4.71e-08!61;UBERON:0001041!7.17e-08!98;UBERON:0003104!8.05e-08!238;UBERON:0009142!8.05e-08!238;UBERON:0000481!8.10e-08!347;UBERON:0002368!2.02e-07!35;UBERON:0000490!7.91e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.89e-46;19!UBERON:0006925;2.89e-46;19!UBERON:0002423;3.23e-43;25!UBERON:0002365;3.95e-27;31!UBERON:0002330;3.95e-27;31!UBERON:0002368;2.96e-23;33!UBERON:0000949;2.30e-14;43!UBERON:0005172;3.27e-13;52!UBERON:0005173;3.27e-13;52!UBERON:0002417;1.17e-09;58!UBERON:0000916;1.17e-09;58!UBERON:0002530;3.12e-08;57!UBERON:0001007;5.12e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,5.11e-49,22;UBERON:0003894,5.11e-49,22;UBERON:0009854,7.72e-47,23;UBERON:0002107,5.19e-46,19;UBERON:0006925,5.19e-46,19;UBERON:0008836,5.19e-46,19;UBERON:0007499,5.30e-43,25;UBERON:0009497,5.30e-43,25;UBERON:0000015,5.30e-43,25;UBERON:0002423,5.30e-43,25;UBERON:0006235,5.30e-43,25;UBERON:0004161,5.30e-43,25;UBERON:0009856,2.64e-41,26;UBERON:0002365,7.81e-28,31;UBERON:0002330,7.81e-28,31;UBERON:0002368,1.54e-24,35;UBERON:0003929,2.57e-23,54;UBERON:0005172,3.23e-19,54;UBERON:0005173,3.23e-19,54;UBERON:0000949,7.43e-19,45;UBERON:0002417,3.62e-17,60;UBERON:0000916,3.62e-17,60;UBERON:0005911,7.44e-15,82;UBERON:0002530,3.99e-14,59;UBERON:0001041,1.85e-11,87;UBERON:0004921,9.26e-10,118;UBERON:0005177,1.16e-09,101;UBERON:0001007,3.21e-09,145;UBERON:0001555,3.21e-09,145;UBERON:0007026,3.21e-09,145;UBERON:0009569,1.41e-08,112;UBERON:0004119,3.38e-08,160;UBERON:0000925,3.38e-08,160;UBERON:0006595,3.38e-08,160;UBERON:0003914,3.59e-08,117;UBERON:0005256,8.83e-08,122;UBERON:0000490,1.54e-07,148;UBERON:0003104,7.14e-07,160;UBERON:0009142,7.14e-07,160 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0,0.207322110030741,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,2.36315962672562,0,1.22988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.483437798366489,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36994326789761,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0.0962221127255121,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0,0,3.58042349351218,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0.353830258013357,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0.144090417154106,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,4.09672547997563,4.53287221096415,5.86410831531409,1.08270229666224,0,0,0,0,0,0,0,0,0,0,1.89133697518076,0.524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,2.05173127149315,1.32506888912221,0,0,0.513260513652988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415045904808692,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,1.46301509978723,0,0,0,0,0,0,0,0,0,0.301925687133347,0.540219106755613,0.218559560503957,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0.332660356546013,0,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p17@SPATS2L | |||
}} |
Revision as of 15:56, 12 September 2013
Short description: | p17@SPATS2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_SPATS2L_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -42bp_to_ENST00000451764_5end |
EntrezGene: | SPATS2L |
HGNC: | 24574 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.41e-44 | 12 |
endodermal cell | 2.41e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 5.85e-10 | 39 |
teratoma | 6.80e-07 | 2 |
signet ring cell adenocarcinoma | 7.61e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.