FFCP PHASE1:Hg19::chr2:165812028..165812040,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=151258|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26836|TSSclassifier=S|UniProt=Q08AI6|association_with_transcript=0bp_to_ENST00000303735,NM_001199148,NM_173512,uc002ucu.1,uc002ucv.1,uc002ucw.1_5end|coexpression_cluster_id=C4140|description=CAGE_peak_1_at_SLC38A11_5end|id=chr2:165812028..165812040,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000097;6.30e-07;5|ontology_enrichment_celltype_v019_2=CL:0000097,6.38e-07,5;CL:0002028,6.38e-07,5|ontology_enrichment_development_v019=UBERON:0006601;3.02e-13;82!UBERON:0007297;1.14e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.66e-62!115;UBERON:0001049!4.78e-54!57;UBERON:0005068!4.78e-54!57;UBERON:0006241!4.78e-54!57;UBERON:0007135!4.78e-54!57;UBERON:0002616!3.24e-47!59;UBERON:0005743!4.99e-44!86;UBERON:0002780!1.59e-43!41;UBERON:0001890!1.59e-43!41;UBERON:0006240!1.59e-43!41;UBERON:0003080!3.64e-42!42;UBERON:0001017!2.70e-41!82;UBERON:0003075!6.07e-41!86;UBERON:0007284!6.07e-41!86;UBERON:0000955!7.98e-41!69;UBERON:0006238!7.98e-41!69;UBERON:0000073!2.39e-39!94;UBERON:0001016!2.39e-39!94;UBERON:0002346!3.19e-38!90;UBERON:0001893!3.42e-38!34;UBERON:0002020!1.30e-37!34;UBERON:0003528!1.30e-37!34;UBERON:0002791!8.07e-37!33;UBERON:0001869!5.05e-36!32;UBERON:0003056!1.75e-31!61;UBERON:0002619!1.27e-28!22;UBERON:0000956!2.26e-28!25;UBERON:0000203!2.26e-28!25;UBERON:0001950!2.41e-26!20;UBERON:0000153!4.41e-24!129;UBERON:0007811!4.41e-24!129;UBERON:0000033!1.97e-22!123;UBERON:0004121!2.51e-18!169;UBERON:0000924!1.93e-17!173;UBERON:0006601!1.93e-17!173;UBERON:0003076!1.17e-12!15;UBERON:0003057!1.17e-12!15;UBERON:0000064!1.03e-11!219;UBERON:0000475!2.49e-11!365;UBERON:0000025!4.17e-11!194;UBERON:0001871!7.42e-11!7;UBERON:0002420!8.05e-11!9;UBERON:0007245!8.05e-11!9;UBERON:0010009!8.05e-11!9;UBERON:0010011!8.05e-11!9;UBERON:0000454!8.05e-11!9;UBERON:0002308!1.43e-10!9;UBERON:0000125!1.43e-10!9;UBERON:0004111!4.31e-10!241;UBERON:0004733!4.34e-10!12;UBERON:0002028!4.34e-10!12;UBERON:0007277!4.34e-10!12;UBERON:0000481!6.03e-10!347;UBERON:0000119!8.30e-10!312;UBERON:0000483!1.02e-09!309;UBERON:0000200!3.18e-09!6;UBERON:0000062!3.21e-09!511;UBERON:0000477!3.70e-09!286;UBERON:0004732!4.17e-09!13;UBERON:0009663!1.08e-08!7;UBERON:0002298!2.43e-08!8;UBERON:0002021!1.49e-07!5;UBERON:0001872!2.20e-07!5;UBERON:0000349!3.24e-07!5;UBERON:0001894!9.06e-07!7;UBERON:0006222!9.06e-07!7|ontology_enrichment_uberon_v019=UBERON:0002619;1.23e-39;22!UBERON:0001950;6.78e-39;20!UBERON:0001869;2.72e-36;32!UBERON:0001893;3.26e-36;34!UBERON:0000956;1.66e-34;25!UBERON:0000203;1.66e-34;25!UBERON:0003528;1.15e-32;34!UBERON:0002020;1.15e-32;34!UBERON:0002791;1.91e-32;32!UBERON:0002780;1.06e-30;41!UBERON:0001890;1.06e-30;41!UBERON:0000073;2.08e-28;53!UBERON:0002616;2.08e-28;53!UBERON:0000200;2.81e-18;6!UBERON:0000955;1.68e-17;68!UBERON:0001017;4.07e-17;75!UBERON:0007023;7.07e-15;114!UBERON:0001016;1.08e-13;83!UBERON:0002298;3.53e-13;6!UBERON:0004733;9.12e-12;12!UBERON:0002028;9.12e-12;12!UBERON:0001871;5.55e-11;6!UBERON:0001896;7.39e-11;3!UBERON:0005290;7.39e-11;3!UBERON:0004732;8.83e-11;13!UBERON:0006947;1.05e-10;3!UBERON:0004054;1.05e-10;3!UBERON:0002021;1.34e-10;5!UBERON:0001872;5.81e-10;5!UBERON:0001870;6.57e-10;3!UBERON:0005904;4.08e-08;4!UBERON:0003296;6.40e-08;4!UBERON:0010133;6.40e-08;4!UBERON:0000007;6.44e-08;2!UBERON:0002771;4.76e-07;2!UBERON:0002360;4.76e-07;2!UBERON:0002702;4.76e-07;2!UBERON:0000094;4.76e-07;2!UBERON:0010743;4.76e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.28e-54,53;UBERON:0002616,3.28e-54,53;UBERON:0007023,1.69e-51,114;UBERON:0001049,6.95e-51,56;UBERON:0005068,6.95e-51,56;UBERON:0006241,6.95e-51,56;UBERON:0007135,6.95e-51,56;UBERON:0002780,2.32e-43,41;UBERON:0001890,2.32e-43,41;UBERON:0003080,2.32e-43,41;UBERON:0006240,2.32e-43,41;UBERON:0000955,1.81e-42,68;UBERON:0006238,1.81e-42,68;UBERON:0001893,5.48e-41,34;UBERON:0001869,4.64e-40,32;UBERON:0002619,9.40e-40,22;UBERON:0001017,3.52e-39,81;UBERON:0001950,5.52e-39,20;UBERON:0003528,4.85e-37,34;UBERON:0002020,4.85e-37,34;UBERON:0003075,5.38e-37,82;UBERON:0007284,5.38e-37,82;UBERON:0002791,3.90e-36,32;UBERON:0002346,7.26e-35,86;UBERON:0000956,1.31e-34,25;UBERON:0000203,1.31e-34,25;UBERON:0001016,2.05e-34,89;UBERON:0003056,3.55e-32,61;UBERON:0010371,2.66e-27,104;UBERON:0010314,5.19e-24,132;UBERON:0000200,1.57e-18,6;UBERON:0004121,2.86e-17,171;UBERON:0000924,2.86e-17,171;UBERON:0006601,2.86e-17,171;UBERON:0011216,1.05e-13,223;UBERON:0002298,3.42e-13,6;UBERON:0000025,9.55e-12,192;UBERON:0004733,1.01e-11,12;UBERON:0002028,1.01e-11,12;UBERON:0007277,1.01e-11,12;UBERON:0001896,6.62e-11,3;UBERON:0005290,6.62e-11,3;UBERON:0010096,6.62e-11,3;UBERON:0001871,6.83e-11,6;UBERON:0006947,8.31e-11,3;UBERON:0004054,8.31e-11,3;UBERON:0004111,9.46e-11,240;UBERON:0004732,9.66e-11,13;UBERON:0002021,1.02e-10,5;UBERON:0001872,4.81e-10,5;UBERON:000187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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=151258 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26836 | |||
|TSSclassifier=S | |||
|UniProt=Q08AI6 | |||
|association_with_transcript=0bp_to_ENST00000303735,NM_001199148,NM_173512,uc002ucu.1,uc002ucv.1,uc002ucw.1_5end | |||
|coexpression_cluster_id=C4140 | |||
|description=CAGE_peak_1_at_SLC38A11_5end | |||
|id=chr2:165812028..165812040,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;6.30e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,6.38e-07,5;CL:0002028,6.38e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.02e-13;82!UBERON:0007297;1.14e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.66e-62!115;UBERON:0001049!4.78e-54!57;UBERON:0005068!4.78e-54!57;UBERON:0006241!4.78e-54!57;UBERON:0007135!4.78e-54!57;UBERON:0002616!3.24e-47!59;UBERON:0005743!4.99e-44!86;UBERON:0002780!1.59e-43!41;UBERON:0001890!1.59e-43!41;UBERON:0006240!1.59e-43!41;UBERON:0003080!3.64e-42!42;UBERON:0001017!2.70e-41!82;UBERON:0003075!6.07e-41!86;UBERON:0007284!6.07e-41!86;UBERON:0000955!7.98e-41!69;UBERON:0006238!7.98e-41!69;UBERON:0000073!2.39e-39!94;UBERON:0001016!2.39e-39!94;UBERON:0002346!3.19e-38!90;UBERON:0001893!3.42e-38!34;UBERON:0002020!1.30e-37!34;UBERON:0003528!1.30e-37!34;UBERON:0002791!8.07e-37!33;UBERON:0001869!5.05e-36!32;UBERON:0003056!1.75e-31!61;UBERON:0002619!1.27e-28!22;UBERON:0000956!2.26e-28!25;UBERON:0000203!2.26e-28!25;UBERON:0001950!2.41e-26!20;UBERON:0000153!4.41e-24!129;UBERON:0007811!4.41e-24!129;UBERON:0000033!1.97e-22!123;UBERON:0004121!2.51e-18!169;UBERON:0000924!1.93e-17!173;UBERON:0006601!1.93e-17!173;UBERON:0003076!1.17e-12!15;UBERON:0003057!1.17e-12!15;UBERON:0000064!1.03e-11!219;UBERON:0000475!2.49e-11!365;UBERON:0000025!4.17e-11!194;UBERON:0001871!7.42e-11!7;UBERON:0002420!8.05e-11!9;UBERON:0007245!8.05e-11!9;UBERON:0010009!8.05e-11!9;UBERON:0010011!8.05e-11!9;UBERON:0000454!8.05e-11!9;UBERON:0002308!1.43e-10!9;UBERON:0000125!1.43e-10!9;UBERON:0004111!4.31e-10!241;UBERON:0004733!4.34e-10!12;UBERON:0002028!4.34e-10!12;UBERON:0007277!4.34e-10!12;UBERON:0000481!6.03e-10!347;UBERON:0000119!8.30e-10!312;UBERON:0000483!1.02e-09!309;UBERON:0000200!3.18e-09!6;UBERON:0000062!3.21e-09!511;UBERON:0000477!3.70e-09!286;UBERON:0004732!4.17e-09!13;UBERON:0009663!1.08e-08!7;UBERON:0002298!2.43e-08!8;UBERON:0002021!1.49e-07!5;UBERON:0001872!2.20e-07!5;UBERON:0000349!3.24e-07!5;UBERON:0001894!9.06e-07!7;UBERON:0006222!9.06e-07!7 | |||
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|short_description=p1@SLC38A11 | |||
}} |
Revision as of 14:28, 12 September 2013
Short description: | p1@SLC38A11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SLC38A11_5end |
Coexpression cluster: | C4140_Mast_medulla_gall_retina_occipital_pituitary_epididymis |
Association with transcript: | 0bp_to_ENST00000303735, NM_001199148, NM_173512, uc002ucu.1, uc002ucv.1, uc002ucw.1_5end |
EntrezGene: | SLC38A11 |
HGNC: | 26836 |
UniProt: | Q08AI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 6.38e-07 | 5 |
basophil mast progenitor cell | 6.38e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.