FFCP PHASE1:Hg19::chr2:69180052..69180063,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=200504|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24588|TSSclassifier=S|UniProt=Q86XP6|association_with_transcript=38bp_to_ENST00000328895,NM_182536,uc002sfa.2,uc002sfb.3_5end|coexpression_cluster_id=C238|description=CAGE_peak_2_at_GKN2_5end|id=chr2:69180052..69180063,-|ontology_enrichment_celltype=CL:0000764!2.81e-14!2;CL:0000765!2.81e-14!2;CL:0000050!2.81e-14!2;CL:0000038!2.81e-14!2;CL:0000558!2.81e-14!2;CL:0000547!2.81e-14!2;CL:0000549!2.81e-14!2;CL:0000550!2.81e-14!2;CL:0000552!2.81e-14!2;CL:1000306!2.13e-07!4;CL:0002547!2.13e-07!4|ontology_enrichment_celltype_v019=CL:0000764;3.42e-10;2!CL:0000558;3.42e-10;2|ontology_enrichment_celltype_v019_2=CL:0000764,3.58e-10,2;CL:0000765,3.58e-10,2;CL:0000050,3.58e-10,2;CL:0000038,3.58e-10,2;CL:0000558,3.58e-10,2;CL:0000547,3.58e-10,2;CL:0000549,3.58e-10,2;CL:0000550,3.58e-10,2;CL:0000552,3.58e-10,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3112!2.89e-08!1;DOID:3369!6.52e-08!1|ontology_enrichment_disease_v019=DOID:3112;1.08e-19;1|ontology_enrichment_disease_v019_2=DOID:3112,1.08e-19,1|ontology_enrichment_uberon=UBERON:0001737!1.82e-11!9;UBERON:0008947!8.56e-10!38;UBERON:0003258!8.56e-10!38;UBERON:0000077!1.94e-09!130;UBERON:0004119!1.07e-08!169;UBERON:0000925!1.07e-08!169;UBERON:0006595!1.07e-08!169;UBERON:0001007!1.37e-08!155;UBERON:0001555!1.37e-08!155;UBERON:0007026!1.37e-08!155;UBERON:0000065!2.04e-08!53;UBERON:0004921!3.32e-08!129;UBERON:0004185!3.32e-08!129;UBERON:0002171!3.55e-08!1;UBERON:0006518!3.55e-08!1;UBERON:0008949!3.55e-08!1;UBERON:0000101!3.55e-08!1;UBERON:0002167!3.55e-08!1;UBERON:0001557!4.14e-08!19;UBERON:0000415!2.13e-07!4;UBERON:0007240!2.13e-07!4;UBERON:0005742!2.13e-07!4;UBERON:0005734!2.13e-07!4;UBERON:0004664!2.13e-07!4;UBERON:0004663!2.13e-07!4;UBERON:0001041!2.86e-07!98|ontology_enrichment_uberon_v019=UBERON:0002171;1.71e-19;1!UBERON:0006518;1.71e-19;1!UBERON:0008949;1.71e-19;1!UBERON:0000101;1.71e-19;1!UBERON:0002167;1.71e-19;1!UBERON:0002114;2.25e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.88e-19,1;UBERON:0006518,1.88e-19,1;UBERON:0008949,1.88e-19,1;UBERON:0000101,1.88e-19,1;UBERON:0002167,1.88e-19,1;UBERON:0002114,2.19e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.79120467188971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,1.0457418040996,0,0,0,1.75169719801128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04953580243319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,8.0090559425771,0.628817220398664,7.04206394090232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.6526301012116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,64.99993855394,0,0,0,0,0,7.93540260773101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@GKN2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=200504 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24588 | |||
|TSSclassifier=S | |||
|UniProt=Q86XP6 | |||
|association_with_transcript=38bp_to_ENST00000328895,NM_182536,uc002sfa.2,uc002sfb.3_5end | |||
|coexpression_cluster_id=C238 | |||
|description=CAGE_peak_2_at_GKN2_5end | |||
|id=chr2:69180052..69180063,- | |||
|ontology_enrichment_celltype=CL:0000764!2.81e-14!2;CL:0000765!2.81e-14!2;CL:0000050!2.81e-14!2;CL:0000038!2.81e-14!2;CL:0000558!2.81e-14!2;CL:0000547!2.81e-14!2;CL:0000549!2.81e-14!2;CL:0000550!2.81e-14!2;CL:0000552!2.81e-14!2;CL:1000306!2.13e-07!4;CL:0002547!2.13e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.42e-10;2!CL:0000558;3.42e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.58e-10,2;CL:0000765,3.58e-10,2;CL:0000050,3.58e-10,2;CL:0000038,3.58e-10,2;CL:0000558,3.58e-10,2;CL:0000547,3.58e-10,2;CL:0000549,3.58e-10,2;CL:0000550,3.58e-10,2;CL:0000552,3.58e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3112!2.89e-08!1;DOID:3369!6.52e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3112;1.08e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,1.08e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.82e-11!9;UBERON:0008947!8.56e-10!38;UBERON:0003258!8.56e-10!38;UBERON:0000077!1.94e-09!130;UBERON:0004119!1.07e-08!169;UBERON:0000925!1.07e-08!169;UBERON:0006595!1.07e-08!169;UBERON:0001007!1.37e-08!155;UBERON:0001555!1.37e-08!155;UBERON:0007026!1.37e-08!155;UBERON:0000065!2.04e-08!53;UBERON:0004921!3.32e-08!129;UBERON:0004185!3.32e-08!129;UBERON:0002171!3.55e-08!1;UBERON:0006518!3.55e-08!1;UBERON:0008949!3.55e-08!1;UBERON:0000101!3.55e-08!1;UBERON:0002167!3.55e-08!1;UBERON:0001557!4.14e-08!19;UBERON:0000415!2.13e-07!4;UBERON:0007240!2.13e-07!4;UBERON:0005742!2.13e-07!4;UBERON:0005734!2.13e-07!4;UBERON:0004664!2.13e-07!4;UBERON:0004663!2.13e-07!4;UBERON:0001041!2.86e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.71e-19;1!UBERON:0006518;1.71e-19;1!UBERON:0008949;1.71e-19;1!UBERON:0000101;1.71e-19;1!UBERON:0002167;1.71e-19;1!UBERON:0002114;2.25e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.88e-19,1;UBERON:0006518,1.88e-19,1;UBERON:0008949,1.88e-19,1;UBERON:0000101,1.88e-19,1;UBERON:0002167,1.88e-19,1;UBERON:0002114,2.19e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.79120467188971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,1.0457418040996,0,0,0,1.75169719801128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04953580243319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0,0,0,0,8.0090559425771,0.628817220398664,7.04206394090232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.6526301012116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,64.99993855394,0,0,0,0,0,7.93540260773101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@GKN2 | |||
}} |
Revision as of 19:29, 12 September 2013
Short description: | p2@GKN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GKN2_5end |
Coexpression cluster: | C238_stomach_gall_breast_duodenum_temporal_MCF7_smallcell |
Association with transcript: | 38bp_to_ENST00000328895, NM_182536, uc002sfa.2, uc002sfb.3_5end |
EntrezGene: | GKN2 |
HGNC: | 24588 |
UniProt: | Q86XP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.58e-10 | 2 |
erythroblast | 3.58e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 3.58e-10 | 2 |
erythroid progenitor cell | 3.58e-10 | 2 |
reticulocyte | 3.58e-10 | 2 |
proerythroblast | 3.58e-10 | 2 |
basophilic erythroblast | 3.58e-10 | 2 |
polychromatophilic erythroblast | 3.58e-10 | 2 |
orthochromatic erythroblast | 3.58e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.88e-19 | 1 |
right lung lobe | 1.88e-19 | 1 |
lower lobe of lung | 1.88e-19 | 1 |
lobe of lung | 1.88e-19 | 1 |
right lung | 1.88e-19 | 1 |
duodenum | 2.19e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 1.08e-19 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.