FFCP PHASE1:Hg19::chr2:50201137..50201151,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9378|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8008|TSSclassifier=W|UniProt=|association_with_transcript=152bp_to_ENST00000484192,uc002rxa.3,uc010yon.1_5end|coexpression_cluster_id=C3|description=CAGE_peak_19_at_NRXN1_5end|id=chr2:50201137..50201151,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002553;3.58e-09;1|ontology_enrichment_celltype_v019_2=CL:0002553,3.87e-09,1|ontology_enrichment_development_v019=UBERON:0006601;7.21e-11;82!UBERON:0010227;1.32e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.41e-85!57;UBERON:0005068!8.41e-85!57;UBERON:0006241!8.41e-85!57;UBERON:0007135!8.41e-85!57;UBERON:0001017!6.40e-77!82;UBERON:0005743!5.69e-73!86;UBERON:0000073!6.03e-72!94;UBERON:0001016!6.03e-72!94;UBERON:0001869!1.55e-71!32;UBERON:0002616!8.54e-69!59;UBERON:0002619!1.43e-68!22;UBERON:0001893!4.66e-67!34;UBERON:0002020!6.33e-67!34;UBERON:0003528!6.33e-67!34;UBERON:0000955!2.81e-64!69;UBERON:0006238!2.81e-64!69;UBERON:0002780!1.22e-63!41;UBERON:0001890!1.22e-63!41;UBERON:0006240!1.22e-63!41;UBERON:0002791!1.23e-63!33;UBERON:0003080!5.45e-62!42;UBERON:0001950!1.56e-61!20;UBERON:0000956!5.11e-60!25;UBERON:0000203!5.11e-60!25;UBERON:0003075!9.06e-57!86;UBERON:0007284!9.06e-57!86;UBERON:0002346!7.30e-54!90;UBERON:0007023!2.45e-48!115;UBERON:0003056!9.10e-41!61;UBERON:0004121!5.47e-38!169;UBERON:0000924!6.86e-37!173;UBERON:0006601!6.86e-37!173;UBERON:0000033!9.20e-35!123;UBERON:0000153!9.48e-33!129;UBERON:0007811!9.48e-33!129;UBERON:0001871!8.51e-30!7;UBERON:0000200!1.91e-23!6;UBERON:0003076!1.03e-22!15;UBERON:0003057!1.03e-22!15;UBERON:0000025!1.35e-21!194;UBERON:0000349!1.79e-19!5;UBERON:0004111!1.40e-15!241;UBERON:0004733!1.70e-14!12;UBERON:0002028!1.70e-14!12;UBERON:0007277!1.70e-14!12;UBERON:0002420!1.99e-14!9;UBERON:0007245!1.99e-14!9;UBERON:0010009!1.99e-14!9;UBERON:0010011!1.99e-14!9;UBERON:0000454!1.99e-14!9;UBERON:0004732!2.66e-13!13;UBERON:0000064!1.06e-12!219;UBERON:0002771!1.07e-12!3;UBERON:0001872!1.09e-12!5;UBERON:0000477!1.31e-12!286;UBERON:0002021!3.99e-12!5;UBERON:0000483!8.32e-12!309;UBERON:0000119!1.33e-11!312;UBERON:0002298!1.45e-11!8;UBERON:0001896!1.72e-11!3;UBERON:0005290!1.72e-11!3;UBERON:0010096!1.72e-11!3;UBERON:0002240!3.07e-11!3;UBERON:0002308!6.66e-10!9;UBERON:0000125!6.66e-10!9;UBERON:0001870!3.06e-09!2;UBERON:0000475!3.17e-09!365;UBERON:0001876!4.36e-09!2;UBERON:0000369!7.17e-09!4;UBERON:0002435!7.17e-09!4;UBERON:0000204!7.17e-09!4;UBERON:0010082!7.17e-09!4;UBERON:0001954!1.19e-08!2;UBERON:0003022!1.19e-08!2;UBERON:0002421!1.19e-08!2;UBERON:0002600!1.19e-08!2;UBERON:0009663!2.14e-08!7;UBERON:0002680!4.80e-07!9;UBERON:0001895!4.80e-07!9;UBERON:0010092!4.80e-07!9;UBERON:0005174!6.44e-07!5;UBERON:0001137!6.44e-07!5|ontology_enrichment_uberon_v019=UBERON:0002619;6.48e-61;22!UBERON:0001950;1.67e-57;20!UBERON:0000956;1.34e-53;25!UBERON:0000203;1.34e-53;25!UBERON:0001869;5.53e-51;32!UBERON:0001893;3.86e-46;34!UBERON:0003528;1.17e-45;34!UBERON:0002020;1.17e-45;34!UBERON:0002791;1.51e-45;32!UBERON:0000200;3.75e-31;6!UBERON:0002780;1.46e-30;41!UBERON:0001890;1.46e-30;41!UBERON:0000073;2.28e-26;53!UBERON:0002616;2.28e-26;53!UBERON:0001871;2.93e-26;6!UBERON:0000349;4.21e-24;5!UBERON:0001870;7.84e-24;3!UBERON:0000955;1.59e-17;68!UBERON:0001017;4.21e-17;75!UBERON:0002702;1.48e-16;2!UBERON:0001876;6.28e-16;2!UBERON:0002771;8.48e-16;2!UBERON:0001016;2.86e-15;83!UBERON:0001872;5.46e-14;5!UBERON:0002298;9.50e-12;6!UBERON:0000988;5.14e-11;3!UBERON:0004733;4.55e-10;12!UBERON:0002028;4.55e-10;12!UBERON:0007023;2.16e-09;114!UBERON:0004732;2.64e-09;13!UBERON:0001882;1.32e-08;1!UBERON:0002079;1.32e-08;1!UBERON:0003112;1.32e-08;1!UBERON:0011158;1.32e-08;1!UBERON:0007190;1.32e-08;1!UBERON:0003128;1.32e-08;1!UBERON:0005403;1.32e-08;1!UBERON:0001703;1.32e-08;1!UBERON:0002241;1.32e-08;1!UBERON:0002680;5.39e-08;9!UBERON:0001895;5.39e-08;9!UBERON:0002420;5.93e-08;9!UBERON:0007245;5.93e-08;9!UBERON:0010009;5.93e-08;9!UBERON:0010011;5.93e-08;9!UBERON:0000454;5.93e-08;9!UBERON:0011216;1.68e-07;132!UBERON:0002021;7.70e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.53e-61,22;UBERON:0001950,1.06e-57,20;UBERON:0001869,9.20e-55,32;UBERON:0000956,9.74e-54,25;UBERON:0000203,9.74e-54,25;UBERON:0001893,1.81e-51,34;UBERON:0000073,2.49e-51,53;UBERON:0002616,2.49e-51,53;UBERON:0003528,2.64e-51,34;UBERON:0002020,2.64e-51,34;UBERON:0001049,1.92e-48,56;UBERON:0005068,1.92e-48,56;UBERON:0006241,1.92e-48,56;UBERON:0007135,1.92e-48,56;UBERON:0002791,5.42e-48,32;UBERON:0001017,2.17e-43,81;UBERON:0000955,4.44e-43,68;UBERON:0006238,4.44e-43,68;UBERON:0002780,2.09e-42,41;UBERON:0001890,2.09e-42,41;UBERON:0003080,2.09e-42,41;UBERON:0006240,2.09e-42,41;UBERON:0001016,2.24e-42,89;UBERON:0003075,3.76e-32,82;UBERON:0007284,3.76e-32,82;UBERON:0000200,1.78e-31,6;UBERON:0002346,1.66e-30,86;UBERON:0003056,8.98e-28,61;UBERON:0007023,1.07e-27,114;U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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9378 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8008 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=152bp_to_ENST00000484192,uc002rxa.3,uc010yon.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_19_at_NRXN1_5end | |||
|id=chr2:50201137..50201151,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;3.58e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,3.87e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.21e-11;82!UBERON:0010227;1.32e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p19@NRXN1 | |||
}} |
Revision as of 18:54, 12 September 2013
Short description: | p19@NRXN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_19_at_NRXN1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 152bp_to_ENST00000484192, uc002rxa.3, uc010yon.1_5end |
EntrezGene: | NRXN1 |
HGNC: | 8008 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 3.87e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.