FFCP PHASE1:Hg19::chr2:21230740..21230751,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=338|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=603|TSSclassifier=W|UniProt=Q59HB3|association_with_transcript=145bp_to_AB208846_5end|coexpression_cluster_id=C5|description=CAGE_peak_24_at_APOB_5end|id=chr2:21230740..21230751,-|ontology_enrichment_celltype=CL:0000181!1.13e-33!12;CL:0000417!1.13e-33!12;CL:0000668!1.13e-33!12;CL:0000414!1.13e-33!12;CL:0000412!1.13e-33!12;CL:0000182!1.13e-33!12;CL:0000223!2.75e-11!59|ontology_enrichment_celltype_v019=CL:0000182;7.95e-50;12|ontology_enrichment_celltype_v019_2=CL:0000182,7.95e-50,12;CL:0000223,3.15e-10,58|ontology_enrichment_development_v019=UBERON:0004161;1.54e-37;11!UBERON:0009497;8.34e-32;13!UBERON:0001041;7.16e-14;30!UBERON:0003104;2.12e-13;31!CL:0000223;8.95e-08;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.56e-37!19;UBERON:0006925!4.56e-37!19;UBERON:0008836!4.56e-37!19;UBERON:0008835!6.52e-32!22;UBERON:0003894!6.52e-32!22;UBERON:0009854!1.71e-30!23;UBERON:0007499!5.43e-28!25;UBERON:0009497!5.43e-28!25;UBERON:0000015!5.43e-28!25;UBERON:0002423!5.43e-28!25;UBERON:0006235!5.43e-28!25;UBERON:0004161!5.43e-28!25;UBERON:0005057!6.94e-27!26;UBERON:0009856!6.94e-27!26;UBERON:0002365!2.02e-22!31;UBERON:0002330!2.02e-22!31;UBERON:0002368!9.17e-20!35;UBERON:0003929!2.16e-19!54;UBERON:0004921!3.56e-17!129;UBERON:0004185!3.56e-17!129;UBERON:0000949!3.50e-15!45;UBERON:0002530!2.48e-14!59;UBERON:0001007!5.75e-14!155;UBERON:0001555!5.75e-14!155;UBERON:0007026!5.75e-14!155;UBERON:0000160!1.14e-13!27;UBERON:0004119!1.21e-12!169;UBERON:0000925!1.21e-12!169;UBERON:0006595!1.21e-12!169;UBERON:0005911!2.53e-12!82;UBERON:0005172!2.92e-12!55;UBERON:0005173!2.92e-12!55;UBERON:0002417!5.76e-11!61;UBERON:0000916!5.76e-11!61;UBERON:0005409!1.49e-10!35;UBERON:0002108!3.43e-07!14;UBERON:0000490!9.14e-07!138|ontology_enrichment_uberon_v019=UBERON:0002107;2.93e-55;19!UBERON:0006925;2.93e-55;19!UBERON:0002423;6.24e-42;25!UBERON:0002365;1.83e-32;31!UBERON:0002330;1.83e-32;31!UBERON:0002368;1.19e-28;33!UBERON:0000949;5.92e-21;43!UBERON:0002108;5.01e-14;4!UBERON:0005172;1.64e-12;52!UBERON:0005173;1.64e-12;52!UBERON:0002417;5.36e-11;58!UBERON:0000916;5.36e-11;58!UBERON:0002530;6.93e-11;57!UBERON:0001007;2.37e-10;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.15e-55,19;UBERON:0006925,3.15e-55,19;UBERON:0008836,3.15e-55,19;UBERON:0008835,1.16e-47,22;UBERON:0003894,1.16e-47,22;UBERON:0009854,1.41e-45,23;UBERON:0007499,6.58e-42,25;UBERON:0009497,6.58e-42,25;UBERON:0000015,6.58e-42,25;UBERON:0002423,6.58e-42,25;UBERON:0006235,6.58e-42,25;UBERON:0004161,6.58e-42,25;UBERON:0009856,2.77e-40,26;UBERON:0002365,9.83e-34,31;UBERON:0002330,9.83e-34,31;UBERON:0002368,7.75e-30,35;UBERON:0000949,4.07e-23,45;UBERON:0003929,3.45e-19,54;UBERON:0005172,3.45e-19,54;UBERON:0005173,3.45e-19,54;UBERON:0002530,1.60e-17,59;UBERON:0002417,3.20e-17,60;UBERON:0000916,3.20e-17,60;UBERON:0002108,4.11e-14,4;UBERON:0004921,3.57e-13,118;UBERON:0005911,1.86e-12,82;UBERON:0001041,1.04e-11,87;UBERON:0001007,1.39e-10,145;UBERON:0001555,1.39e-10,145;UBERON:0007026,1.39e-10,145;UBERON:0005177,5.29e-10,101;UBERON:0004119,1.63e-09,160;UBERON:0000925,1.63e-09,160;UBERON:0006595,1.63e-09,160;UBERON:0009569,5.85e-09,112;UBERON:0003914,1.50e-08,117;UBERON:0005256,3.58e-08,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.6318125358591,12.7767538168091,5.90789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25429184459008,5.27461493639465,4.4486338943762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66380584195206,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=603 | |||
|TSSclassifier=W | |||
|UniProt=Q59HB3 | |||
|association_with_transcript=145bp_to_AB208846_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_24_at_APOB_5end | |||
|id=chr2:21230740..21230751,- | |||
|ontology_enrichment_celltype=CL:0000181!1.13e-33!12;CL:0000417!1.13e-33!12;CL:0000668!1.13e-33!12;CL:0000414!1.13e-33!12;CL:0000412!1.13e-33!12;CL:0000182!1.13e-33!12;CL:0000223!2.75e-11!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.95e-50;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.95e-50,12;CL:0000223,3.15e-10,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.54e-37;11!UBERON:0009497;8.34e-32;13!UBERON:0001041;7.16e-14;30!UBERON:0003104;2.12e-13;31!CL:0000223;8.95e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.56e-37!19;UBERON:0006925!4.56e-37!19;UBERON:0008836!4.56e-37!19;UBERON:0008835!6.52e-32!22;UBERON:0003894!6.52e-32!22;UBERON:0009854!1.71e-30!23;UBERON:0007499!5.43e-28!25;UBERON:0009497!5.43e-28!25;UBERON:0000015!5.43e-28!25;UBERON:0002423!5.43e-28!25;UBERON:0006235!5.43e-28!25;UBERON:0004161!5.43e-28!25;UBERON:0005057!6.94e-27!26;UBERON:0009856!6.94e-27!26;UBERON:0002365!2.02e-22!31;UBERON:0002330!2.02e-22!31;UBERON:0002368!9.17e-20!35;UBERON:0003929!2.16e-19!54;UBERON:0004921!3.56e-17!129;UBERON:0004185!3.56e-17!129;UBERON:0000949!3.50e-15!45;UBERON:0002530!2.48e-14!59;UBERON:0001007!5.75e-14!155;UBERON:0001555!5.75e-14!155;UBERON:0007026!5.75e-14!155;UBERON:0000160!1.14e-13!27;UBERON:0004119!1.21e-12!169;UBERON:0000925!1.21e-12!169;UBERON:0006595!1.21e-12!169;UBERON:0005911!2.53e-12!82;UBERON:0005172!2.92e-12!55;UBERON:0005173!2.92e-12!55;UBERON:0002417!5.76e-11!61;UBERON:0000916!5.76e-11!61;UBERON:0005409!1.49e-10!35;UBERON:0002108!3.43e-07!14;UBERON:0000490!9.14e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.93e-55;19!UBERON:0006925;2.93e-55;19!UBERON:0002423;6.24e-42;25!UBERON:0002365;1.83e-32;31!UBERON:0002330;1.83e-32;31!UBERON:0002368;1.19e-28;33!UBERON:0000949;5.92e-21;43!UBERON:0002108;5.01e-14;4!UBERON:0005172;1.64e-12;52!UBERON:0005173;1.64e-12;52!UBERON:0002417;5.36e-11;58!UBERON:0000916;5.36e-11;58!UBERON:0002530;6.93e-11;57!UBERON:0001007;2.37e-10;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.15e-55,19;UBERON:0006925,3.15e-55,19;UBERON:0008836,3.15e-55,19;UBERON:0008835,1.16e-47,22;UBERON:0003894,1.16e-47,22;UBERON:0009854,1.41e-45,23;UBERON:0007499,6.58e-42,25;UBERON:0009497,6.58e-42,25;UBERON:0000015,6.58e-42,25;UBERON:0002423,6.58e-42,25;UBERON:0006235,6.58e-42,25;UBERON:0004161,6.58e-42,25;UBERON:0009856,2.77e-40,26;UBERON:0002365,9.83e-34,31;UBERON:0002330,9.83e-34,31;UBERON:0002368,7.75e-30,35;UBERON:0000949,4.07e-23,45;UBERON:0003929,3.45e-19,54;UBERON:0005172,3.45e-19,54;UBERON:0005173,3.45e-19,54;UBERON:0002530,1.60e-17,59;UBERON:0002417,3.20e-17,60;UBERON:0000916,3.20e-17,60;UBERON:0002108,4.11e-14,4;UBERON:0004921,3.57e-13,118;UBERON:0005911,1.86e-12,82;UBERON:0001041,1.04e-11,87;UBERON:0001007,1.39e-10,145;UBERON:0001555,1.39e-10,145;UBERON:0007026,1.39e-10,145;UBERON:0005177,5.29e-10,101;UBERON:0004119,1.63e-09,160;UBERON:0000925,1.63e-09,160;UBERON:0006595,1.63e-09,160;UBERON:0009569,5.85e-09,112;UBERON:0003914,1.50e-08,117;UBERON:0005256,3.58e-08,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.6318125358591,12.7767538168091,5.90789906681404,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25429184459008,5.27461493639465,4.4486338943762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66380584195206,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62065732026684,1.5299169235277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p24@APOB | |||
}} |
Revision as of 16:25, 12 September 2013
Short description: | p24@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_24_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 145bp_to_AB208846_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | Q59HB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.95e-50 | 12 |
endodermal cell | 3.15e-10 | 58 |
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