FFCP PHASE1:Hg19::chr19:40440897..40440908,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8857|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13572|TSSclassifier=N|UniProt=Q9Y6R7|association_with_transcript=-364bp_to_ENST00000221347,NM_003890,uc002omp.3_5end|coexpression_cluster_id=C120|description=CAGE_peak_2_at_FCGBP_5end|id=chr19:40440897..40440908,-|ontology_enrichment_celltype=CL:0000453!3.75e-13!5;CL:0001014!1.78e-09!2;CL:0001016!1.78e-09!2;CL:0000990!2.64e-07!8|ontology_enrichment_celltype_v019=CL:0001014;3.44e-25;2!CL:0001016;3.44e-25;2!CL:0000453;5.48e-22;5!CL:0000990;1.70e-12;8!CL:0000451;2.51e-10;10!CL:0000840;4.94e-09;5|ontology_enrichment_celltype_v019_2=CL:0001014,3.44e-25,2;CL:0001016,3.44e-25,2;CL:0000453,5.11e-22,5;CL:0000990,1.63e-12,8;CL:0000451,2.43e-10,10;CL:0000840,4.94e-09,5;CL:0001029,4.94e-09,5|ontology_enrichment_development_v019=UBERON:0001045;3.14e-13;1!UBERON:0006242;8.64e-13;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.99e-41!115;UBERON:0002780!1.43e-33!41;UBERON:0001890!1.43e-33!41;UBERON:0006240!1.43e-33!41;UBERON:0001049!1.45e-33!57;UBERON:0005068!1.45e-33!57;UBERON:0006241!1.45e-33!57;UBERON:0007135!1.45e-33!57;UBERON:0003080!1.14e-32!42;UBERON:0002616!2.38e-29!59;UBERON:0001893!4.07e-26!34;UBERON:0000955!7.14e-24!69;UBERON:0006238!7.14e-24!69;UBERON:0002791!7.15e-24!33;UBERON:0001017!2.72e-23!82;UBERON:0002020!6.01e-23!34;UBERON:0003528!6.01e-23!34;UBERON:0003075!2.88e-22!86;UBERON:0007284!2.88e-22!86;UBERON:0005743!6.11e-22!86;UBERON:0001869!1.99e-21!32;UBERON:0003056!4.74e-21!61;UBERON:0002346!5.26e-21!90;UBERON:0000073!2.60e-19!94;UBERON:0001016!2.60e-19!94;UBERON:0002619!4.10e-17!22;UBERON:0001950!1.29e-15!20;UBERON:0000956!7.07e-15!25;UBERON:0000203!7.07e-15!25;UBERON:0000153!1.26e-12!129;UBERON:0007811!1.26e-12!129;UBERON:0000033!2.91e-12!123;UBERON:0001871!1.43e-11!7;UBERON:0002420!4.02e-10!9;UBERON:0007245!4.02e-10!9;UBERON:0010009!4.02e-10!9;UBERON:0010011!4.02e-10!9;UBERON:0000454!4.02e-10!9;UBERON:0004121!5.07e-10!169;UBERON:0002308!6.32e-10!9;UBERON:0000125!6.32e-10!9;UBERON:0000924!1.19e-09!173;UBERON:0006601!1.19e-09!173;UBERON:0000059!3.41e-09!11;UBERON:0001894!4.99e-09!7;UBERON:0006222!4.99e-09!7;UBERON:0009663!1.50e-08!7;UBERON:0000025!3.73e-08!194;UBERON:0000160!4.14e-08!27;UBERON:0005409!1.42e-07!35;UBERON:0001155!1.61e-07!9;UBERON:0002298!2.17e-07!8|ontology_enrichment_uberon_v019=UBERON:0000160;4.45e-41;17!UBERON:0005409;2.70e-40;22!UBERON:0000059;8.39e-27;11!UBERON:0004921;4.58e-25;33!UBERON:0002108;6.10e-22;4!UBERON:0001155;2.22e-21;9!UBERON:0001154;3.14e-13;1!UBERON:0001153;3.14e-13;1!UBERON:0009854;3.14e-13;1!UBERON:0001555;1.24e-10;54!UBERON:0004907;2.25e-10;5!UBERON:0003127;3.81e-07;2!UBERON:0001905;3.81e-07;2!UBERON:0002757;3.81e-07;2!UBERON:0010134;3.81e-07;2!UBERON:0005408;3.81e-07;2!UBERON:0001899;3.81e-07;2!UBERON:0001007;7.42e-07;81|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.01e-41,17;UBERON:0005409,1.46e-35,25;UBERON:0000059,7.34e-27,11;UBERON:0002108,6.32e-22,4;UBERON:0001155,2.11e-21,9;UBERON:0001154,2.95e-13,1;UBERON:0001153,2.95e-13,1;UBERON:0001045,2.95e-13,1;UBERON:0004907,2.04e-10,5;UBERON:0004921,1.28e-08,118;UBERON:0001007,2.79e-08,145;UBERON:0001555,2.79e-08,145;UBERON:0007026,2.79e-08,145;UBERON:0004119,2.29e-07,160;UBERON:0000925,2.29e-07,160;UBERON:0006595,2.29e-07,160;UBERON:0003127,3.93e-07,2;UBERON:0001905,4.17e-07,2;UBERON:0002757,4.17e-07,2;UBERON:0010134,4.17e-07,2;UBERON:0005408,4.17e-07,2;UBERON:0001899,4.17e-07,2;UBERON:0011216,6.12e-07,223|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0.597743964753209,3.31540698637377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9478812418636,2.65372693510018,4.888241159469,0,0,0,0.471807930864739,0,0.468528891450678,0,0,0,0,1.20990716048664,0,0.758238955541855,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8857 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13572 | |||
|TSSclassifier=N | |||
|UniProt=Q9Y6R7 | |||
|association_with_transcript=-364bp_to_ENST00000221347,NM_003890,uc002omp.3_5end | |||
|coexpression_cluster_id=C120 | |||
|description=CAGE_peak_2_at_FCGBP_5end | |||
|id=chr19:40440897..40440908,- | |||
|ontology_enrichment_celltype=CL:0000453!3.75e-13!5;CL:0001014!1.78e-09!2;CL:0001016!1.78e-09!2;CL:0000990!2.64e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0001014;3.44e-25;2!CL:0001016;3.44e-25;2!CL:0000453;5.48e-22;5!CL:0000990;1.70e-12;8!CL:0000451;2.51e-10;10!CL:0000840;4.94e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.44e-25,2;CL:0001016,3.44e-25,2;CL:0000453,5.11e-22,5;CL:0000990,1.63e-12,8;CL:0000451,2.43e-10,10;CL:0000840,4.94e-09,5;CL:0001029,4.94e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.14e-13;1!UBERON:0006242;8.64e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.99e-41!115;UBERON:0002780!1.43e-33!41;UBERON:0001890!1.43e-33!41;UBERON:0006240!1.43e-33!41;UBERON:0001049!1.45e-33!57;UBERON:0005068!1.45e-33!57;UBERON:0006241!1.45e-33!57;UBERON:0007135!1.45e-33!57;UBERON:0003080!1.14e-32!42;UBERON:0002616!2.38e-29!59;UBERON:0001893!4.07e-26!34;UBERON:0000955!7.14e-24!69;UBERON:0006238!7.14e-24!69;UBERON:0002791!7.15e-24!33;UBERON:0001017!2.72e-23!82;UBERON:0002020!6.01e-23!34;UBERON:0003528!6.01e-23!34;UBERON:0003075!2.88e-22!86;UBERON:0007284!2.88e-22!86;UBERON:0005743!6.11e-22!86;UBERON:0001869!1.99e-21!32;UBERON:0003056!4.74e-21!61;UBERON:0002346!5.26e-21!90;UBERON:0000073!2.60e-19!94;UBERON:0001016!2.60e-19!94;UBERON:0002619!4.10e-17!22;UBERON:0001950!1.29e-15!20;UBERON:0000956!7.07e-15!25;UBERON:0000203!7.07e-15!25;UBERON:0000153!1.26e-12!129;UBERON:0007811!1.26e-12!129;UBERON:0000033!2.91e-12!123;UBERON:0001871!1.43e-11!7;UBERON:0002420!4.02e-10!9;UBERON:0007245!4.02e-10!9;UBERON:0010009!4.02e-10!9;UBERON:0010011!4.02e-10!9;UBERON:0000454!4.02e-10!9;UBERON:0004121!5.07e-10!169;UBERON:0002308!6.32e-10!9;UBERON:0000125!6.32e-10!9;UBERON:0000924!1.19e-09!173;UBERON:0006601!1.19e-09!173;UBERON:0000059!3.41e-09!11;UBERON:0001894!4.99e-09!7;UBERON:0006222!4.99e-09!7;UBERON:0009663!1.50e-08!7;UBERON:0000025!3.73e-08!194;UBERON:0000160!4.14e-08!27;UBERON:0005409!1.42e-07!35;UBERON:0001155!1.61e-07!9;UBERON:0002298!2.17e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;4.45e-41;17!UBERON:0005409;2.70e-40;22!UBERON:0000059;8.39e-27;11!UBERON:0004921;4.58e-25;33!UBERON:0002108;6.10e-22;4!UBERON:0001155;2.22e-21;9!UBERON:0001154;3.14e-13;1!UBERON:0001153;3.14e-13;1!UBERON:0009854;3.14e-13;1!UBERON:0001555;1.24e-10;54!UBERON:0004907;2.25e-10;5!UBERON:0003127;3.81e-07;2!UBERON:0001905;3.81e-07;2!UBERON:0002757;3.81e-07;2!UBERON:0010134;3.81e-07;2!UBERON:0005408;3.81e-07;2!UBERON:0001899;3.81e-07;2!UBERON:0001007;7.42e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.01e-41,17;UBERON:0005409,1.46e-35,25;UBERON:0000059,7.34e-27,11;UBERON:0002108,6.32e-22,4;UBERON:0001155,2.11e-21,9;UBERON:0001154,2.95e-13,1;UBERON:0001153,2.95e-13,1;UBERON:0001045,2.95e-13,1;UBERON:0004907,2.04e-10,5;UBERON:0004921,1.28e-08,118;UBERON:0001007,2.79e-08,145;UBERON:0001555,2.79e-08,145;UBERON:0007026,2.79e-08,145;UBERON:0004119,2.29e-07,160;UBERON:0000925,2.29e-07,160;UBERON:0006595,2.29e-07,160;UBERON:0003127,3.93e-07,2;UBERON:0001905,4.17e-07,2;UBERON:0002757,4.17e-07,2;UBERON:0010134,4.17e-07,2;UBERON:0005408,4.17e-07,2;UBERON:0001899,4.17e-07,2;UBERON:0011216,6.12e-07,223 | |||
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|short_description=p2@FCGBP | |||
}} |
Revision as of 20:38, 11 September 2013
Short description: | p2@FCGBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_FCGBP_5end |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | -364bp_to_ENST00000221347, NM_003890, uc002omp.3_5end |
EntrezGene: | FCGBP |
HGNC: | 13572 |
UniProt: | Q9Y6R7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.44e-25 | 2 |
immature CD1a-positive Langerhans cell | 3.44e-25 | 2 |
Langerhans cell | 5.11e-22 | 5 |
conventional dendritic cell | 1.63e-12 | 8 |
dendritic cell | 2.43e-10 | 10 |
immature conventional dendritic cell | 4.94e-09 | 5 |
common dendritic progenitor | 4.94e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.01e-41 | 17 |
gastrointestinal system | 1.46e-35 | 25 |
large intestine | 7.34e-27 | 11 |
small intestine | 6.32e-22 | 4 |
colon | 2.11e-21 | 9 |
vermiform appendix | 2.95e-13 | 1 |
caecum | 2.95e-13 | 1 |
midgut | 2.95e-13 | 1 |
lower digestive tract | 2.04e-10 | 5 |
subdivision of digestive tract | 1.28e-08 | 118 |
digestive system | 2.79e-08 | 145 |
digestive tract | 2.79e-08 | 145 |
primitive gut | 2.79e-08 | 145 |
endoderm-derived structure | 2.29e-07 | 160 |
endoderm | 2.29e-07 | 160 |
presumptive endoderm | 2.29e-07 | 160 |
open tracheal system trachea | 3.93e-07 | 2 |
pineal body | 4.17e-07 | 2 |
regional part of epithalamus | 4.17e-07 | 2 |
secretory circumventricular organ | 4.17e-07 | 2 |
circumventricular organ | 4.17e-07 | 2 |
epithalamus | 4.17e-07 | 2 |
organ system subdivision | 6.12e-07 | 223 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.