FFCP PHASE1:Hg19::chr19:18496957..18496977,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9518 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30142 | |||
|TSSclassifier=W | |||
|UniProt=Q99988 | |||
|association_with_transcript=0bp_to_ENST00000252809,NM_004864,uc002niv.2_5end | |||
|coexpression_cluster_id=C1813 | |||
|description=CAGE_peak_1_at_GDF15_5end | |||
|id=chr19:18496957..18496977,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.01e-30!254;CL:0000220!7.54e-24!246;CL:0002321!8.42e-24!248;CL:0000222!3.09e-19!119;CL:0000548!6.20e-14!679;CL:0000004!6.20e-14!679;CL:0000255!6.20e-14!679;CL:0000012!6.94e-13!682;CL:0002139!6.26e-12!24;CL:0000055!7.16e-12!180;CL:0002078!1.07e-11!44;CL:0000115!2.18e-11!35;CL:0000213!2.75e-11!57;CL:0000215!2.75e-11!57;CL:0000183!4.93e-09!59;CL:0000071!7.64e-09!18;CL:0002546!7.64e-09!18;CL:0000192!1.06e-08!42;CL:0000514!1.06e-08!42;CL:1000497!2.38e-08!18;CL:0002518!2.38e-08!18;CL:0000187!1.03e-07!54;CL:0000680!1.60e-07!57;CL:0000056!1.60e-07!57;CL:0000355!1.60e-07!57;CL:1000449!3.46e-07!16;CL:0000144!4.40e-07!625;CL:0000076!4.50e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.34e-12;24!CL:0000115;6.89e-10;36!CL:0000071;6.77e-09;18!CL:0002078;2.54e-08;45!CL:1000497;6.93e-08;17!CL:0002518;6.93e-08;17!CL:0000213;3.24e-07;58!CL:0000215;3.24e-07;58!CL:0000192;8.30e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.86e-29,253;CL:0002321,1.13e-24,250;CL:0000222,4.72e-20,121;CL:0002139,5.32e-12,24;CL:0002078,5.63e-12,45;CL:0000115,7.86e-12,36;CL:0000213,1.44e-11,58;CL:0000215,1.44e-11,58;CL:0000192,3.43e-09,43;CL:0000514,3.43e-09,43;CL:0000071,6.81e-09,18;CL:0002546,6.81e-09,18;CL:0000187,3.77e-08,55;CL:0000680,6.01e-08,58;CL:0000056,6.01e-08,58;CL:0000355,6.01e-08,58;CL:1000497,7.02e-08,17;CL:0002518,7.02e-08,17;CL:0000076,6.11e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;6.77e-09;18!CL:0000514;8.30e-07;43 | |||
|ontology_enrichment_disease=DOID:305!6.37e-08!106;DOID:0050687!2.99e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.19e-08,106;DOID:0050687,4.15e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002100!3.33e-19!216;UBERON:0003914!1.80e-18!118;UBERON:0002049!1.51e-16!79;UBERON:0007798!1.51e-16!79;UBERON:0000466!4.88e-15!126;UBERON:0000055!5.87e-15!69;UBERON:0003104!7.02e-15!238;UBERON:0009142!7.02e-15!238;UBERON:0000490!3.55e-14!138;UBERON:0009569!4.83e-14!113;UBERON:0000464!1.24e-12!104;UBERON:0003886!4.03e-12!63;UBERON:0004872!4.33e-12!84;UBERON:0001981!4.61e-12!60;UBERON:0007500!4.61e-12!60;UBERON:0004537!4.61e-12!60;UBERON:0006965!4.61e-12!60;UBERON:0005256!3.04e-11!143;UBERON:0005177!3.85e-11!107;UBERON:0002553!8.69e-11!70;UBERON:0000468!2.14e-10!659;UBERON:0006554!7.34e-10!44;UBERON:0000926!9.93e-10!448;UBERON:0004120!9.93e-10!448;UBERON:0006603!9.93e-10!448;UBERON:0001637!1.06e-09!42;UBERON:0003509!1.06e-09!42;UBERON:0004572!1.06e-09!42;UBERON:0001008!1.36e-09!45;UBERON:0002417!1.79e-09!61;UBERON:0000916!1.79e-09!61;UBERON:0000487!7.23e-09!22;UBERON:0001986!7.64e-09!18;UBERON:0004638!7.64e-09!18;UBERON:0004852!7.64e-09!18;UBERON:0005172!1.95e-08!55;UBERON:0005173!1.95e-08!55;UBERON:0004535!2.77e-08!110;UBERON:0001048!3.42e-08!168;UBERON:0004573!4.44e-08!33;UBERON:0004571!4.44e-08!33;UBERON:0006914!5.26e-08!25;UBERON:0001009!6.02e-08!113;UBERON:0000119!7.38e-08!312;UBERON:0000481!7.82e-08!347;UBERON:0004119!1.13e-07!169;UBERON:0000925!1.13e-07!169;UBERON:0006595!1.13e-07!169;UBERON:0003064!1.37e-07!37;UBERON:0000483!1.53e-07!309;UBERON:0002113!1.78e-07!27;UBERON:0003918!1.78e-07!27;UBERON:0005095!1.78e-07!27;UBERON:0007687!1.78e-07!27;UBERON:0004921!1.99e-07!129;UBERON:0004185!1.99e-07!129;UBERON:0002323!2.90e-07!46;UBERON:0000353!3.44e-07!17;UBERON:0004211!3.46e-07!16;UBERON:0001285!3.46e-07!16;UBERON:0007684!3.46e-07!16;UBERON:0003220!3.46e-07!16;UBERON:0004208!3.46e-07!16;UBERON:0000947!3.90e-07!21;UBERON:0010191!3.90e-07!21;UBERON:0000467!5.89e-07!625;UBERON:0004111!6.33e-07!241;UBERON:0004458!6.34e-07!49;UBERON:0005156!6.34e-07!59;UBERON:0000990!6.34e-07!59;UBERON:0000480!8.26e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;6.41e-09;22!UBERON:0004638;6.77e-09;18!UBERON:0001986;6.77e-09;18!UBERON:0004852;6.77e-09;18!UBERON:0000055;1.22e-08;65!UBERON:0003914;1.27e-08;74!UBERON:0006914;6.94e-08;25!UBERON:0001637;8.09e-08;42!UBERON:0003509;8.09e-08;42!UBERON:0004572;8.09e-08;42!UBERON:0006554;8.17e-08;30!UBERON:0001008;8.17e-08;30!UBERON:0007500;8.55e-08;56!UBERON:0001981;8.55e-08;56!UBERON:0004537;8.55e-08;56!UBERON:0002049;9.51e-08;75!UBERON:0007798;9.51e-08;75!UBERON:0000490;1.10e-07;33!UBERON:0004573;1.17e-07;33!UBERON:0004571;1.17e-07;33!UBERON:0002113;1.30e-07;24!UBERON:0011143;1.30e-07;24!UBERON:0000947;3.69e-07;21!UBERON:0010191;3.69e-07;21!UBERON:0000353;8.93e-07;15!UBERON:0000025;9.26e-07;93 | |||
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| |||
|short_description=p1@GDF15 | |||
}} |
Revision as of 19:27, 11 September 2013
Short description: | p1@GDF15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_GDF15_5end |
Coexpression cluster: | C1813_somatostatinoma_melanoma_mesenchymal_placenta_smallcell_Keratocytes_renal |
Association with transcript: | 0bp_to_ENST00000252809, NM_004864, uc002niv.2_5end |
EntrezGene: | GDF15 |
HGNC: | 30142 |
UniProt: | Q99988 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.86e-29 | 253 |
embryonic cell | 1.13e-24 | 250 |
mesodermal cell | 4.72e-20 | 121 |
endothelial cell of vascular tree | 5.32e-12 | 24 |
meso-epithelial cell | 5.63e-12 | 45 |
endothelial cell | 7.86e-12 | 36 |
lining cell | 1.44e-11 | 58 |
barrier cell | 1.44e-11 | 58 |
smooth muscle cell | 3.43e-09 | 43 |
smooth muscle myoblast | 3.43e-09 | 43 |
blood vessel endothelial cell | 6.81e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.81e-09 | 18 |
muscle cell | 3.77e-08 | 55 |
muscle precursor cell | 6.01e-08 | 58 |
myoblast | 6.01e-08 | 58 |
multi-potent skeletal muscle stem cell | 6.01e-08 | 58 |
kidney cell | 7.02e-08 | 17 |
kidney epithelial cell | 7.02e-08 | 17 |
squamous epithelial cell | 6.11e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.19e-08 | 106 |
cell type cancer | 4.15e-07 | 143 |
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