FFCP PHASE1:Hg19::chr19:1071203..1071243,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23526|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17102|TSSclassifier=S|UniProt=F5H1R4|association_with_transcript=0bp_to_ENST00000543365,uc002lrb.1_5end|description=CAGE_peak_7_at_HMHA1_5end|id=chr19:1071203..1071243,+|ontology_enrichment_celltype=CL:0002322!8.15e-13!5;CL:0000066!5.40e-11!254;CL:0002586!3.06e-07!3;CL:0002681!3.10e-07!13;CL:0002584!3.10e-07!13;CL:0000540!7.25e-07!6;CL:0000031!7.25e-07!6;CL:0000404!7.25e-07!6|ontology_enrichment_celltype_v019=CL:0002322;7.62e-29;5!CL:0002321;1.81e-09;15!CL:0000540;2.16e-09;6!CL:0000404;2.16e-09;6|ontology_enrichment_celltype_v019_2=CL:0002322,7.01e-29,5;CL:0000540,2.13e-09,6;CL:0000031,2.13e-09,6;CL:0000404,2.13e-09,6;CL:0000047,3.77e-07,8|ontology_enrichment_development_v019=CL:0000031;2.16e-09;6|ontology_enrichment_disease=DOID:5409!1.48e-09!4;DOID:0050687!1.92e-07!143;DOID:3119!4.86e-07!14|ontology_enrichment_disease_v019=DOID:5409;7.33e-13;4!DOID:1325;1.48e-07;7!DOID:3904;1.48e-07;7!DOID:3371;4.25e-07;1!DOID:4549;4.25e-07;1!DOID:5861;4.25e-07;1!DOID:6496;4.25e-07;1!DOID:3347;5.68e-07;1|ontology_enrichment_disease_v019_2=DOID:5409,8.30e-13,4;DOID:0050687,1.22e-07,143;DOID:1325,1.59e-07,7;DOID:3904,1.59e-07,7;DOID:305,2.12e-07,106;DOID:3371,4.25e-07,1;DOID:4549,4.25e-07,1;DOID:5861,4.25e-07,1;DOID:6496,4.25e-07,1;DOID:3347,6.02e-07,1|ontology_enrichment_uberon=UBERON:0001851!3.34e-09!16;UBERON:0001781!3.06e-07!3;UBERON:0001782!3.06e-07!3;UBERON:0005424!3.06e-07!3;UBERON:0001225!3.10e-07!13;UBERON:0008987!3.10e-07!13;UBERON:0000473!5.88e-07!8|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0.267899184852239,0.44905874525234,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2215809639228,12.7228577588626,9.41170937243099,4.25010325563019,6.30802127189071,15.3290490811849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0.0925884451585296,0.977424915930974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,0,0.0920809889358963,0,0,0,1.35359883872224,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,1.31205858279882,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3530088909341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0,1.05562704063997,0,0,1.0077309914171,0,0,0,1.07842021376792,0,0,0,0,0,0,0,0,0,0,0,6.14484620741698,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26164914294305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,7.50177076877752,0,0,0,0,0,0,0,0,2.16135625731159,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,13.5032644710616,10.3154577447925,10.3860084507296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,1.66018361923477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,1.04397716786085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0.107824811396682,0.471797825567689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1421595563606,0,0,0,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40136081656895,0,0,0,0,0,5.23086414156564,3.47716544605159,0,0,0,0,0,0.236664001461131,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,1.16969731731053,0.795803100645473,4.75680363110274,0.22589216407792,1.09940516745429,1.05673990496671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,11.1026453854869,3.05943601498347,0,0.61193297845189,9.35260918429462,0,14.7917448182501,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,21.9858332508094,0,0,0,0,0,0,0,0|short_description=p7@HMHA1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23526 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17102 | |||
|TSSclassifier=S | |||
|UniProt=F5H1R4 | |||
|association_with_transcript=0bp_to_ENST00000543365,uc002lrb.1_5end | |||
|description=CAGE_peak_7_at_HMHA1_5end | |||
|id=chr19:1071203..1071243,+ | |||
|ontology_enrichment_celltype=CL:0002322!8.15e-13!5;CL:0000066!5.40e-11!254;CL:0002586!3.06e-07!3;CL:0002681!3.10e-07!13;CL:0002584!3.10e-07!13;CL:0000540!7.25e-07!6;CL:0000031!7.25e-07!6;CL:0000404!7.25e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;7.62e-29;5!CL:0002321;1.81e-09;15!CL:0000540;2.16e-09;6!CL:0000404;2.16e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.01e-29,5;CL:0000540,2.13e-09,6;CL:0000031,2.13e-09,6;CL:0000404,2.13e-09,6;CL:0000047,3.77e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000031;2.16e-09;6 | |||
|ontology_enrichment_disease=DOID:5409!1.48e-09!4;DOID:0050687!1.92e-07!143;DOID:3119!4.86e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:5409;7.33e-13;4!DOID:1325;1.48e-07;7!DOID:3904;1.48e-07;7!DOID:3371;4.25e-07;1!DOID:4549;4.25e-07;1!DOID:5861;4.25e-07;1!DOID:6496;4.25e-07;1!DOID:3347;5.68e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.30e-13,4;DOID:0050687,1.22e-07,143;DOID:1325,1.59e-07,7;DOID:3904,1.59e-07,7;DOID:305,2.12e-07,106;DOID:3371,4.25e-07,1;DOID:4549,4.25e-07,1;DOID:5861,4.25e-07,1;DOID:6496,4.25e-07,1;DOID:3347,6.02e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001851!3.34e-09!16;UBERON:0001781!3.06e-07!3;UBERON:0001782!3.06e-07!3;UBERON:0005424!3.06e-07!3;UBERON:0001225!3.10e-07!13;UBERON:0008987!3.10e-07!13;UBERON:0000473!5.88e-07!8 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0.267899184852239,0.44905874525234,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2215809639228,12.7228577588626,9.41170937243099,4.25010325563019,6.30802127189071,15.3290490811849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0.0925884451585296,0.977424915930974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,0,0.0920809889358963,0,0,0,1.35359883872224,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,1.31205858279882,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3530088909341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0,0,0,1.05562704063997,0,0,1.0077309914171,0,0,0,1.07842021376792,0,0,0,0,0,0,0,0,0,0,0,6.14484620741698,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26164914294305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,7.50177076877752,0,0,0,0,0,0,0,0,2.16135625731159,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,13.5032644710616,10.3154577447925,10.3860084507296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785270481251171,0,0,0,0,0,0,1.66018361923477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,1.04397716786085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279759015438889,0,0,0.107824811396682,0.471797825567689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1421595563606,0,0,0,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40136081656895,0,0,0,0,0,5.23086414156564,3.47716544605159,0,0,0,0,0,0.236664001461131,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,1.16969731731053,0.795803100645473,4.75680363110274,0.22589216407792,1.09940516745429,1.05673990496671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,11.1026453854869,3.05943601498347,0,0.61193297845189,9.35260918429462,0,14.7917448182501,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,21.9858332508094,0,0,0,0,0,0,0,0 | |||
|short_description=p7@HMHA1 | |||
}} |
Revision as of 18:35, 11 September 2013
Short description: | p7@HMHA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_HMHA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000543365, uc002lrb.1_5end |
EntrezGene: | HMHA1 |
HGNC: | 17102 |
UniProt: | F5H1R4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.01e-29 | 5 |
neuron | 2.13e-09 | 6 |
neuroblast | 2.13e-09 | 6 |
electrically signaling cell | 2.13e-09 | 6 |
neuronal stem cell | 3.77e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.30e-13 | 4 |
cell type cancer | 1.22e-07 | 143 |
bronchus cancer | 1.59e-07 | 7 |
bronchogenic carcinoma | 1.59e-07 | 7 |
carcinoma | 2.12e-07 | 106 |
chondrosarcoma | 4.25e-07 | 1 |
extraosseous chondrosarcoma | 4.25e-07 | 1 |
myxoid chondrosarcoma | 4.25e-07 | 1 |
extraskeletal myxoid chondrosarcoma | 4.25e-07 | 1 |
osteosarcoma | 6.02e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.