FFCP PHASE1:Hg19::chr17:78866954..78866969,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C146|description=CAGE_peak_at_chr17:78866954..78866969,+|id=chr17:78866954..78866969,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002127;3.58e-09;1!CL:0000911;3.58e-09;1!CL:0000814;3.58e-09;1!CL:0000243;2.45e-07;15!CL:0000125;2.45e-07;15|ontology_enrichment_celltype_v019_2=CL:0002127,3.58e-09,1;CL:0000914,3.58e-09,1;CL:0000911,3.58e-09,1;CL:0000814,3.58e-09,1;CL:0002042,3.58e-09,1;CL:0002039,3.58e-09,1;CL:0002040,3.58e-09,1;CL:0002041,3.58e-09,1;CL:0000243,2.33e-07,15;CL:0000125,2.33e-07,15;CL:0000030,2.33e-07,15;CL:0000339,2.33e-07,15|ontology_enrichment_development_v019=UBERON:0008947;6.16e-20;29!UBERON:0006238;2.92e-11;10!CL:0000339;2.45e-07;15|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3093;2.45e-10;11!DOID:0060085;7.26e-09;1!DOID:3165;7.26e-09;1!DOID:0060121;7.26e-09;1!DOID:2438;7.26e-09;1!DOID:4418;7.26e-09;1|ontology_enrichment_disease_v019_2=DOID:162,7.07e-15,235;DOID:14566,1.75e-14,239;DOID:3093,2.28e-10,11;DOID:0060085,8.49e-09,1;DOID:3165,8.49e-09,1;DOID:0060121,8.49e-09,1;DOID:2438,8.49e-09,1;DOID:4418,8.49e-09,1;DOID:0050687,6.19e-08,143;DOID:305,6.25e-07,106|ontology_enrichment_uberon=UBERON:0001737!3.77e-14!9;UBERON:0001557!2.89e-09!19;UBERON:0002619!6.69e-09!22;UBERON:0000955!1.55e-07!69;UBERON:0006238!1.55e-07!69;UBERON:0000956!1.97e-07!25;UBERON:0000203!1.97e-07!25;UBERON:0001950!2.42e-07!20;UBERON:0002780!3.80e-07!41;UBERON:0001890!3.80e-07!41;UBERON:0006240!3.80e-07!41;UBERON:0001869!4.86e-07!32;UBERON:0003080!7.30e-07!42|ontology_enrichment_uberon_v019=UBERON:0001737;5.55e-67;9!UBERON:0001557;5.55e-67;9!UBERON:0000072;1.86e-14;37!UBERON:0000065;3.39e-12;44|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.89e-67,9;UBERON:0001557,1.21e-38,19;UBERON:0008947,5.74e-15,38;UBERON:0003258,5.74e-15,38;UBERON:0000072,1.09e-14,47;UBERON:0000065,1.40e-12,54;UBERON:0001004,9.54e-09,74;UBERON:0001041,3.34e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.618831764800233,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0.242584061187816,0.464858073811369,0,0,0.28769239232215,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0.376484679085209,0.545812300115692,0.224723484445085,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0.384273959177026,0.910415432919148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.61417158655884,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,1.0647612003586,1.85443159085912,1.44606617930089,1.98529150918309,2.83243277320128,4.50814176311084,1.07865046528132,1.96221465125346,3.46272441251751,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,2.12961773587702,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.813795071099207,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0.457847324091717,0.41254749960294,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32687795048244,0.438450885253763,0,0,0.405820753925408,0.92947049429925,0.563391205064483,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318852545457645,0,0,5.29183956809707,0.973865820823666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921482106297696,0,0.281338832821026,0,6.0977433463901,0,0,0,0,1.22722419002586,0,0,0,0,0,0.690503839458535,0,0,0,0.371072392647405,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0.87754158861589,0,0,0.230850775511391,0,0,0,0,0.31900115973192,0.0915975934018623,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0.0979923974143777,0.870592065804026,0,0,0,0,0,0,0,0,0.274083849293502,1.19228767021794,0.189932387867636,0,0.0801588202515337,0,0,0,0,0,0,2.73355578243952,0,1.49494626680975,2.09205692624666,0.407992870545287,1.73370353940911,0,0,0,0.429765441419957,5.25774708558629,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C146 | |||
|description=CAGE_peak_at_chr17:78866954..78866969,+ | |||
|id=chr17:78866954..78866969,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002127;3.58e-09;1!CL:0000911;3.58e-09;1!CL:0000814;3.58e-09;1!CL:0000243;2.45e-07;15!CL:0000125;2.45e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.58e-09,1;CL:0000914,3.58e-09,1;CL:0000911,3.58e-09,1;CL:0000814,3.58e-09,1;CL:0002042,3.58e-09,1;CL:0002039,3.58e-09,1;CL:0002040,3.58e-09,1;CL:0002041,3.58e-09,1;CL:0000243,2.33e-07,15;CL:0000125,2.33e-07,15;CL:0000030,2.33e-07,15;CL:0000339,2.33e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0008947;6.16e-20;29!UBERON:0006238;2.92e-11;10!CL:0000339;2.45e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;2.45e-10;11!DOID:0060085;7.26e-09;1!DOID:3165;7.26e-09;1!DOID:0060121;7.26e-09;1!DOID:2438;7.26e-09;1!DOID:4418;7.26e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.07e-15,235;DOID:14566,1.75e-14,239;DOID:3093,2.28e-10,11;DOID:0060085,8.49e-09,1;DOID:3165,8.49e-09,1;DOID:0060121,8.49e-09,1;DOID:2438,8.49e-09,1;DOID:4418,8.49e-09,1;DOID:0050687,6.19e-08,143;DOID:305,6.25e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.77e-14!9;UBERON:0001557!2.89e-09!19;UBERON:0002619!6.69e-09!22;UBERON:0000955!1.55e-07!69;UBERON:0006238!1.55e-07!69;UBERON:0000956!1.97e-07!25;UBERON:0000203!1.97e-07!25;UBERON:0001950!2.42e-07!20;UBERON:0002780!3.80e-07!41;UBERON:0001890!3.80e-07!41;UBERON:0006240!3.80e-07!41;UBERON:0001869!4.86e-07!32;UBERON:0003080!7.30e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.55e-67;9!UBERON:0001557;5.55e-67;9!UBERON:0000072;1.86e-14;37!UBERON:0000065;3.39e-12;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.89e-67,9;UBERON:0001557,1.21e-38,19;UBERON:0008947,5.74e-15,38;UBERON:0003258,5.74e-15,38;UBERON:0000072,1.09e-14,47;UBERON:0000065,1.40e-12,54;UBERON:0001004,9.54e-09,74;UBERON:0001041,3.34e-07,87 | |||
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|short_description=p@chr17:78866954..78866969,+ | |||
}} |
Revision as of 16:21, 11 September 2013
Short description: | p@chr17:78866954..78866969, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:78866954..78866969, + |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.58e-09 | 1 |
immature NK T cell | 3.58e-09 | 1 |
effector T cell | 3.58e-09 | 1 |
mature NK T cell | 3.58e-09 | 1 |
immature NK T cell stage IV | 3.58e-09 | 1 |
immature NK T cell stage I | 3.58e-09 | 1 |
immature NK T cell stage II | 3.58e-09 | 1 |
immature NK T cell stage III | 3.58e-09 | 1 |
glial cell (sensu Vertebrata) | 2.33e-07 | 15 |
glial cell | 2.33e-07 | 15 |
glioblast | 2.33e-07 | 15 |
glioblast (sensu Vertebrata) | 2.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.89e-67 | 9 |
upper respiratory tract | 1.21e-38 | 19 |
respiratory primordium | 5.74e-15 | 38 |
endoderm of foregut | 5.74e-15 | 38 |
segment of respiratory tract | 1.09e-14 | 47 |
respiratory tract | 1.40e-12 | 54 |
respiratory system | 9.54e-09 | 74 |
foregut | 3.34e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.07e-15 | 235 |
disease of cellular proliferation | 1.75e-14 | 239 |
nervous system cancer | 2.28e-10 | 11 |
organ system benign neoplasm | 8.49e-09 | 1 |
skin benign neoplasm | 8.49e-09 | 1 |
integumentary system benign neoplasm | 8.49e-09 | 1 |
dermis tumor | 8.49e-09 | 1 |
cutaneous fibrous histiocytoma | 8.49e-09 | 1 |
cell type cancer | 6.19e-08 | 143 |
carcinoma | 6.25e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.