FFCP PHASE1:Hg19::chr17:76353285..76353333,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr17:76353285..76353333,-|id=chr17:76353285..76353333,-|ontology_enrichment_celltype=CL:0002057!1.24e-19!42;CL:0000860!1.76e-18!45;CL:0000766!1.69e-14!76;CL:0002009!3.70e-11!65;CL:0000557!5.39e-11!71;CL:0002194!2.02e-10!63;CL:0000576!2.02e-10!63;CL:0000040!2.02e-10!63;CL:0000559!2.02e-10!63;CL:0000738!3.37e-10!140;CL:0000839!7.96e-10!70;CL:0000763!9.69e-09!112;CL:0000049!9.69e-09!112;CL:0000988!7.97e-07!182|ontology_enrichment_celltype_v019=CL:0000860;3.07e-37;33!CL:0002057;3.07e-37;33!CL:0000473;9.56e-27;39!CL:0000234;9.56e-27;39!CL:0000576;4.27e-20;48!CL:0000766;2.10e-18;69!CL:0000094;6.56e-14;8!CL:0000081;1.17e-09;11!CL:0000763;1.84e-09;100!CL:0002087;2.54e-09;104!CL:0000738;3.78e-07;136|ontology_enrichment_celltype_v019_2=CL:0000766,4.52e-40,72;CL:0000860,2.02e-38,42;CL:0002057,2.02e-38,42;CL:0000473,1.38e-34,48;CL:0000234,1.38e-34,48;CL:0000738,5.19e-32,136;CL:0000557,1.17e-29,67;CL:0000839,2.34e-28,66;CL:0002009,6.17e-28,61;CL:0002194,2.97e-27,59;CL:0000576,2.97e-27,59;CL:0000040,2.97e-27,59;CL:0000559,2.97e-27,59;CL:0000763,8.12e-25,108;CL:0000049,8.12e-25,108;CL:0002031,5.03e-24,120;CL:0000037,1.17e-23,168;CL:0002032,3.20e-23,161;CL:0000837,3.20e-23,161;CL:0002087,5.11e-23,115;CL:0000988,1.32e-22,177;CL:0002320,5.85e-16,361;CL:0000094,7.14e-14,8;CL:0000134,8.67e-13,354;CL:0000219,5.03e-11,386;CL:0000048,3.04e-10,427;CL:0000723,8.22e-10,433;CL:0000081,1.24e-09,11;CL:0000034,2.94e-09,441|ontology_enrichment_development_v019=CL:0002057;7.24e-28;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.71e-13!102;UBERON:0003061!1.71e-13!102;UBERON:0001474!2.15e-12!86;UBERON:0002371!4.14e-12!80;UBERON:0004765!1.37e-11!101;UBERON:0001434!1.37e-11!101;UBERON:0002193!1.47e-11!112;UBERON:0002204!9.26e-10!167;UBERON:0002405!2.74e-07!115|ontology_enrichment_uberon_v019=UBERON:0004905;5.01e-09;8!UBERON:0000982;5.01e-09;8!UBERON:0004770;5.01e-09;8!UBERON:0011135;6.03e-08;5!UBERON:0002216;6.03e-08;5!UBERON:0011134;6.03e-08;5!UBERON:0002209;6.03e-08;5!UBERON:0002213;6.03e-08;5!UBERON:0007844;6.03e-08;5!UBERON:0011138;6.03e-08;5!UBERON:0001130;6.03e-08;5!UBERON:0001066;6.03e-08;5!UBERON:0001468;6.03e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0004765,3.17e-30,90;UBERON:0001434,1.20e-28,100;UBERON:0002371,1.11e-27,76;UBERON:0001474,2.04e-26,82;UBERON:0002390,1.27e-22,98;UBERON:0003061,1.27e-22,98;UBERON:0002405,7.94e-22,93;UBERON:0002193,1.29e-20,108;UBERON:0002384,3.33e-16,371;UBERON:0002204,7.53e-16,167;UBERON:0004905,1.67e-09,8;UBERON:0000982,1.67e-09,8;UBERON:0004770,1.67e-09,8;UBERON:0011135,2.42e-08,5;UBERON:0002216,2.42e-08,5;UBERON:0011134,2.42e-08,5;UBERON:0002209,2.42e-08,5;UBERON:0002213,2.42e-08,5;UBERON:0005856,2.42e-08,5;UBERON:0005866,2.42e-08,5;UBERON:0005863,2.42e-08,5;UBERON:0007844,2.42e-08,5;UBERON:0011138,2.42e-08,5;UBERON:0001130,2.42e-08,5;UBERON:0001066,2.42e-08,5;UBERON:0001468,2.42e-08,5;UBERON:0003081,1.13e-07,203|phase1_expression=0,0,0,0,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0,0,0.218441372130172,0,1.48519623552056,1.32558950291166,0,0,0.730310090387373,0.487932798790507,0.738726348460727,1.42800483870977,2.5076377718247,0.85870796139317,0.273748850145768,0.753255837568817,0.0764134057479513,0,0.0787107813136792,3.14691421479123,1.15148819429164,1.08371286321253,0,0,0.369754010166788,0,0,0.293600439334847,5.53995408531877,3.20871115952227,6.72733699219141,0,0,0,1.01778767145695,0.755751887377619,0.727752183563449,3.0215774797739,2.46700732813095,3.09706370895104,20.1384674625505,15.1134816852169,10.6417003449863,15.8583013138845,8.39130088658974,5.41705946377367,2.25890807451126,0.545812300115692,1.57306439111559,32.4448925913157,7.38136762275015,14.0654167675789,6.59702600373432,8.37747362010854,6.81959600852311,17.1223450790865,9.07816359505824,13.0792672289071,20.3511418857962,15.644487552606,11.0766310799609,8.47559303686716,6.99727508376373,6.64571013625857,0.633765858935825,0.637812899895131,0,0.898629049171961,1.05123824989054,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,1.17447437874188,1.14681968437569,0,0.560508562981536,0.263384084775077,1.180258620683,5.50215067848831,6.7848494669838,0.167186495390678,0.651844533267181,0,0,0.111410456885174,0.589211814949674,0,0.270803863765016,1.0247305578054,1.56071217071854,0.328875809207352,0,0,1.03800594213442,0.267540828089713,0,0,0,1.03088233644789,0.759059076058509,0,0,0,0,0,0,0.236777252044017,0,1.20964045934839,1.06976078313403,1.15859523106239,2.43806866313962,2.01210257911091,0.255725123687061,0.361439152384566,0.50133791063589,1.44846518960824,0.795285947051099,1.45990461090791,0.567208902984407,0.221729397462564,0.351339142772504,0.0654895377488563,1.09288586487763,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr17:76353285..76353333,- | |||
|id=chr17:76353285..76353333,- | |||
|ontology_enrichment_celltype=CL:0002057!1.24e-19!42;CL:0000860!1.76e-18!45;CL:0000766!1.69e-14!76;CL:0002009!3.70e-11!65;CL:0000557!5.39e-11!71;CL:0002194!2.02e-10!63;CL:0000576!2.02e-10!63;CL:0000040!2.02e-10!63;CL:0000559!2.02e-10!63;CL:0000738!3.37e-10!140;CL:0000839!7.96e-10!70;CL:0000763!9.69e-09!112;CL:0000049!9.69e-09!112;CL:0000988!7.97e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.07e-37;33!CL:0002057;3.07e-37;33!CL:0000473;9.56e-27;39!CL:0000234;9.56e-27;39!CL:0000576;4.27e-20;48!CL:0000766;2.10e-18;69!CL:0000094;6.56e-14;8!CL:0000081;1.17e-09;11!CL:0000763;1.84e-09;100!CL:0002087;2.54e-09;104!CL:0000738;3.78e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.52e-40,72;CL:0000860,2.02e-38,42;CL:0002057,2.02e-38,42;CL:0000473,1.38e-34,48;CL:0000234,1.38e-34,48;CL:0000738,5.19e-32,136;CL:0000557,1.17e-29,67;CL:0000839,2.34e-28,66;CL:0002009,6.17e-28,61;CL:0002194,2.97e-27,59;CL:0000576,2.97e-27,59;CL:0000040,2.97e-27,59;CL:0000559,2.97e-27,59;CL:0000763,8.12e-25,108;CL:0000049,8.12e-25,108;CL:0002031,5.03e-24,120;CL:0000037,1.17e-23,168;CL:0002032,3.20e-23,161;CL:0000837,3.20e-23,161;CL:0002087,5.11e-23,115;CL:0000988,1.32e-22,177;CL:0002320,5.85e-16,361;CL:0000094,7.14e-14,8;CL:0000134,8.67e-13,354;CL:0000219,5.03e-11,386;CL:0000048,3.04e-10,427;CL:0000723,8.22e-10,433;CL:0000081,1.24e-09,11;CL:0000034,2.94e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.24e-28;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.71e-13!102;UBERON:0003061!1.71e-13!102;UBERON:0001474!2.15e-12!86;UBERON:0002371!4.14e-12!80;UBERON:0004765!1.37e-11!101;UBERON:0001434!1.37e-11!101;UBERON:0002193!1.47e-11!112;UBERON:0002204!9.26e-10!167;UBERON:0002405!2.74e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004905;5.01e-09;8!UBERON:0000982;5.01e-09;8!UBERON:0004770;5.01e-09;8!UBERON:0011135;6.03e-08;5!UBERON:0002216;6.03e-08;5!UBERON:0011134;6.03e-08;5!UBERON:0002209;6.03e-08;5!UBERON:0002213;6.03e-08;5!UBERON:0007844;6.03e-08;5!UBERON:0011138;6.03e-08;5!UBERON:0001130;6.03e-08;5!UBERON:0001066;6.03e-08;5!UBERON:0001468;6.03e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,3.17e-30,90;UBERON:0001434,1.20e-28,100;UBERON:0002371,1.11e-27,76;UBERON:0001474,2.04e-26,82;UBERON:0002390,1.27e-22,98;UBERON:0003061,1.27e-22,98;UBERON:0002405,7.94e-22,93;UBERON:0002193,1.29e-20,108;UBERON:0002384,3.33e-16,371;UBERON:0002204,7.53e-16,167;UBERON:0004905,1.67e-09,8;UBERON:0000982,1.67e-09,8;UBERON:0004770,1.67e-09,8;UBERON:0011135,2.42e-08,5;UBERON:0002216,2.42e-08,5;UBERON:0011134,2.42e-08,5;UBERON:0002209,2.42e-08,5;UBERON:0002213,2.42e-08,5;UBERON:0005856,2.42e-08,5;UBERON:0005866,2.42e-08,5;UBERON:0005863,2.42e-08,5;UBERON:0007844,2.42e-08,5;UBERON:0011138,2.42e-08,5;UBERON:0001130,2.42e-08,5;UBERON:0001066,2.42e-08,5;UBERON:0001468,2.42e-08,5;UBERON:0003081,1.13e-07,203 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0,0,0.218441372130172,0,1.48519623552056,1.32558950291166,0,0,0.730310090387373,0.487932798790507,0.738726348460727,1.42800483870977,2.5076377718247,0.85870796139317,0.273748850145768,0.753255837568817,0.0764134057479513,0,0.0787107813136792,3.14691421479123,1.15148819429164,1.08371286321253,0,0,0.369754010166788,0,0,0.293600439334847,5.53995408531877,3.20871115952227,6.72733699219141,0,0,0,1.01778767145695,0.755751887377619,0.727752183563449,3.0215774797739,2.46700732813095,3.09706370895104,20.1384674625505,15.1134816852169,10.6417003449863,15.8583013138845,8.39130088658974,5.41705946377367,2.25890807451126,0.545812300115692,1.57306439111559,32.4448925913157,7.38136762275015,14.0654167675789,6.59702600373432,8.37747362010854,6.81959600852311,17.1223450790865,9.07816359505824,13.0792672289071,20.3511418857962,15.644487552606,11.0766310799609,8.47559303686716,6.99727508376373,6.64571013625857,0.633765858935825,0.637812899895131,0,0.898629049171961,1.05123824989054,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,1.17447437874188,1.14681968437569,0,0.560508562981536,0.263384084775077,1.180258620683,5.50215067848831,6.7848494669838,0.167186495390678,0.651844533267181,0,0,0.111410456885174,0.589211814949674,0,0.270803863765016,1.0247305578054,1.56071217071854,0.328875809207352,0,0,1.03800594213442,0.267540828089713,0,0,0,1.03088233644789,0.759059076058509,0,0,0,0,0,0,0.236777252044017,0,1.20964045934839,1.06976078313403,1.15859523106239,2.43806866313962,2.01210257911091,0.255725123687061,0.361439152384566,0.50133791063589,1.44846518960824,0.795285947051099,1.45990461090791,0.567208902984407,0.221729397462564,0.351339142772504,0.0654895377488563,1.09288586487763,0,0,0.348259474598534,0,1.43094374583205,0.571994910780128,0.371457501329565,0,0,0,0,0.419499436209906,0.825354125820202,0.417989933073621,0.258416759169329,0,0,0.805658634218294,0.760272105718513,0,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,2.63560834872127,3.87780264148325,0,0.496971951695318,0.25326102332916,0,0.573673241497627,0,0.560677600142307,0,0.24666754841716,0,0,0,0.302714855289863,1.72852777344,0,0,0,0.448346041655403,0,0,0.140450806702248,0,0.491337269247072,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0.226864366320042,0.179389635688862,0,0.211931901159562,0,0,0,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0,0,0.201504196455281,0.169560592310488,0.193260853163297,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0,0,0,0,1.92972281457866,0,0.928735856063958,0,0.828147600278907,0.505754070234305,0,0.882351781859152,0.435758888184812,0.237270619111097,0.269662616320329,0,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77791307545966,0.380508304469197,0,0,0,0,0.148631162288728,0.93733833986777,0,0,0.0895585227028483,0,0,0,0,1.65862492432618,1.58531948758658,2.27236380167484,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0.845302752556,0,0,1.02882949704857,0,0.532844358032199,0.142977993658148,0,0,0.325736184293735,0.710783897485092,0.791951872933429,0,0,0,0,0,2.10833939483032,0,0,0,0,1.43833425785268,0,0.448340575974109,1.57624608161542,1.72502059887614,1.02674429023799,0.254094624222463,0,0,0.167516265334349,1.91381625495949,2.99602809578873,14.9580729602012,2.48649308061621,1.47229790062968,1.50051156317903,1.62759014219841,0.207970861530807,0.892144943985809,0.788512075169673,0.35142424497814,0,2.27407504055985,1.03473071292505,0,0,0.781952530212746,0.391602314925481,1.71571711905428,0.206768026122887,2.37285620900479,1.38745825144478,0,0,0,0,0,0.280660094433074,0.128139149255701,0.511707249066704,0.160853921143607,0,0.154209693802656,0.355123450626254,0.9033987161519,0.519254429183621,2.20799719073923,0.483437798366489,0.200506470303285,0,0.918515585316854,0.364182336013434,0.524497659837696,0,0,0.784349769176855,1.46139224653261,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0,0.501689773854853,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,1.03041011647722,0.183138929636687,0.082509499920588,0,0,1.6068392984416,0.386682873168488,0.462145851343933,0.307007349452259,0.275673144969061,0.644521469209642,0.725083469571143,0.426133137080504,0.712256285173899,0.330569830721956,0.192190067365106,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0,0,0.37064843820784,0,0.372158369359667,0.632758849437452,0.190630193923825,0.511795582622668,0.855877976067841,0.318203247925937,0,0.719489830333259,0.274537029736055,0.471249609382746,0,0,0,0.48763373908959,0.487426979262569,0,0.545999645631943,1.41405431953713,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0.143411352204052,0.294747123039363,0,0.354761064070598,1.89996871767898,1.31717957183961,0,0,0.192444225451024,0,0,0.753150406214233,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.822724546172388,0.64847331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| |||
|short_description=p@chr17:76353285..76353333,- | |||
}} |
Revision as of 16:03, 11 September 2013
Short description: | p@chr17:76353285..76353333, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:76353285..76353333, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.52e-40 | 72 |
classical monocyte | 2.02e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.02e-38 | 42 |
defensive cell | 1.38e-34 | 48 |
phagocyte | 1.38e-34 | 48 |
leukocyte | 5.19e-32 | 136 |
granulocyte monocyte progenitor cell | 1.17e-29 | 67 |
myeloid lineage restricted progenitor cell | 2.34e-28 | 66 |
macrophage dendritic cell progenitor | 6.17e-28 | 61 |
monopoietic cell | 2.97e-27 | 59 |
monocyte | 2.97e-27 | 59 |
monoblast | 2.97e-27 | 59 |
promonocyte | 2.97e-27 | 59 |
myeloid cell | 8.12e-25 | 108 |
common myeloid progenitor | 8.12e-25 | 108 |
hematopoietic lineage restricted progenitor cell | 5.03e-24 | 120 |
hematopoietic stem cell | 1.17e-23 | 168 |
hematopoietic oligopotent progenitor cell | 3.20e-23 | 161 |
hematopoietic multipotent progenitor cell | 3.20e-23 | 161 |
nongranular leukocyte | 5.11e-23 | 115 |
hematopoietic cell | 1.32e-22 | 177 |
connective tissue cell | 5.85e-16 | 361 |
granulocyte | 7.14e-14 | 8 |
mesenchymal cell | 8.67e-13 | 354 |
motile cell | 5.03e-11 | 386 |
multi fate stem cell | 3.04e-10 | 427 |
somatic stem cell | 8.22e-10 | 433 |
blood cell | 1.24e-09 | 11 |
stem cell | 2.94e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 3.17e-30 | 90 |
skeletal system | 1.20e-28 | 100 |
bone marrow | 1.11e-27 | 76 |
bone element | 2.04e-26 | 82 |
hematopoietic system | 1.27e-22 | 98 |
blood island | 1.27e-22 | 98 |
immune system | 7.94e-22 | 93 |
hemolymphoid system | 1.29e-20 | 108 |
connective tissue | 3.33e-16 | 371 |
musculoskeletal system | 7.53e-16 | 167 |
articulation | 1.67e-09 | 8 |
skeletal joint | 1.67e-09 | 8 |
articular system | 1.67e-09 | 8 |
intervertebral cartilage | 2.42e-08 | 5 |
symphysis | 2.42e-08 | 5 |
nonsynovial joint | 2.42e-08 | 5 |
fibrous joint | 2.42e-08 | 5 |
cartilaginous joint | 2.42e-08 | 5 |
developing mesenchymal condensation | 2.42e-08 | 5 |
pre-cartilage condensation | 2.42e-08 | 5 |
cartilaginous condensation | 2.42e-08 | 5 |
cartilage element | 2.42e-08 | 5 |
post-cranial axial skeletal system | 2.42e-08 | 5 |
vertebral column | 2.42e-08 | 5 |
intervertebral disk | 2.42e-08 | 5 |
intervertebral joint | 2.42e-08 | 5 |
lateral plate mesoderm | 1.13e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.