FFCP PHASE1:Hg19::chr17:40673560..40673564,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=W|UniProt=|association_with_transcript=-171bp_to_ENST00000540989_5end|description=CAGE_peak_2_at_ENST00000540989_5end|id=chr17:40673560..40673564,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002262;5.15e-21;2!CL:1000398;5.15e-21;2!CL:0000182;3.36e-14;12!CL:0002188;3.10e-09;5!CL:0000235;5.54e-08;6!CL:1000746;5.86e-07;7!CL:1000612;5.86e-07;7|ontology_enrichment_celltype_v019_2=CL:0002262,5.70e-21,2;CL:1000398,5.70e-21,2;CL:0000182,3.84e-14,12;CL:0002188,2.97e-09,5;CL:0000235,5.54e-08,6;CL:1000746,5.70e-07,7;CL:1000612,5.70e-07,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.97e-10!82;UBERON:0001049!3.14e-10!57;UBERON:0005068!3.14e-10!57;UBERON:0006241!3.14e-10!57;UBERON:0007135!3.14e-10!57;UBERON:0005743!4.03e-10!86;UBERON:0000073!7.01e-10!94;UBERON:0001016!7.01e-10!94;UBERON:0003075!9.35e-08!86;UBERON:0007284!9.35e-08!86;UBERON:0002346!1.15e-07!90;UBERON:0002020!2.98e-07!34;UBERON:0003528!2.98e-07!34;UBERON:0001893!3.28e-07!34;UBERON:0002616!5.94e-07!59;UBERON:0002780!6.17e-07!41;UBERON:0001890!6.17e-07!41;UBERON:0006240!6.17e-07!41|ontology_enrichment_uberon_v019=UBERON:0002771;5.15e-21;2!UBERON:0001281;5.15e-21;2!UBERON:0003497;5.15e-21;2!UBERON:0003909;5.15e-21;2!UBERON:0003835;5.15e-21;2!UBERON:0001280;1.71e-14;3!UBERON:0004647;1.71e-14;3!UBERON:0000353;1.42e-11;15!UBERON:0002107;2.36e-09;19!UBERON:0006925;2.36e-09;19!UBERON:0000200;6.55e-08;6!UBERON:0002423;2.43e-07;25!UBERON:0001871;5.86e-07;6!UBERON:0003513;5.86e-07;7!UBERON:0000074;5.86e-07;7!UBERON:0001229;5.86e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0002771,3.81e-21,2;UBERON:0001281,5.70e-21,2;UBERON:0003497,5.70e-21,2;UBERON:0003909,5.70e-21,2;UBERON:0003835,5.70e-21,2;UBERON:0001280,1.83e-14,3;UBERON:0004647,1.83e-14,3;UBERON:0005171,1.83e-14,3;UBERON:0000353,1.42e-11,15;UBERON:0000058,2.36e-09,19;UBERON:0002107,2.56e-09,19;UBERON:0006925,2.56e-09,19;UBERON:0008836,2.56e-09,19;UBERON:0008835,3.51e-08,22;UBERON:0003894,3.51e-08,22;UBERON:0000200,5.92e-08,6;UBERON:0002394,6.78e-08,6;UBERON:0003928,6.78e-08,6;UBERON:0009854,7.23e-08,23;UBERON:0005172,2.27e-07,54;UBERON:0005173,2.27e-07,54;UBERON:0007499,2.58e-07,25;UBERON:0009497,2.58e-07,25;UBERON:0000015,2.58e-07,25;UBERON:0002423,2.58e-07,25;UBERON:0006235,2.58e-07,25;UBERON:0004161,2.58e-07,25;UBERON:0009856,4.55e-07,26;UBERON:0001871,5.38e-07,6;UBERON:0010532,5.70e-07,7;UBERON:0000074,5.70e-07,7;UBERON:0001229,5.70e-07,7;UBERON:0001230,5.70e-07,7;UBERON:0003220,5.70e-07,7;UBERON:0005749,5.70e-07,7;UBERON:0004199,5.70e-07,7;UBERON:0004209,5.70e-07,7;UBERON:0004198,5.70e-07,7;UBERON:0003513,6.04e-07,7|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0.152826811495903,0,0.236132343941038,0,0.383829398097213,0,0,0,0,0,0,0,0,0.401088894940283,0,0.223915474239924,0,0,0,0,0.485168122375632,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0.221729397462564,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,1.40241773803446,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0.790204397959275,0,0.246217006087397,0.468008530278475,0.297262324577456,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0.600686115687835,0.857479297891735,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0.535286966391485,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0.30239029332968,0,0.306923946576125,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0.120859449591622,0.40101294060657,0.0920809889358963,0,0,0.262248829918848,0,0.15403067420883,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0.170453254832202,0,0,0,0,0.10115778085555,0.464845549297286,0.31481234683064,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-171bp_to_ENST00000540989_5end | |||
|description=CAGE_peak_2_at_ENST00000540989_5end | |||
|id=chr17:40673560..40673564,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002262;5.15e-21;2!CL:1000398;5.15e-21;2!CL:0000182;3.36e-14;12!CL:0002188;3.10e-09;5!CL:0000235;5.54e-08;6!CL:1000746;5.86e-07;7!CL:1000612;5.86e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,5.70e-21,2;CL:1000398,5.70e-21,2;CL:0000182,3.84e-14,12;CL:0002188,2.97e-09,5;CL:0000235,5.54e-08,6;CL:1000746,5.70e-07,7;CL:1000612,5.70e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.97e-10!82;UBERON:0001049!3.14e-10!57;UBERON:0005068!3.14e-10!57;UBERON:0006241!3.14e-10!57;UBERON:0007135!3.14e-10!57;UBERON:0005743!4.03e-10!86;UBERON:0000073!7.01e-10!94;UBERON:0001016!7.01e-10!94;UBERON:0003075!9.35e-08!86;UBERON:0007284!9.35e-08!86;UBERON:0002346!1.15e-07!90;UBERON:0002020!2.98e-07!34;UBERON:0003528!2.98e-07!34;UBERON:0001893!3.28e-07!34;UBERON:0002616!5.94e-07!59;UBERON:0002780!6.17e-07!41;UBERON:0001890!6.17e-07!41;UBERON:0006240!6.17e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;5.15e-21;2!UBERON:0001281;5.15e-21;2!UBERON:0003497;5.15e-21;2!UBERON:0003909;5.15e-21;2!UBERON:0003835;5.15e-21;2!UBERON:0001280;1.71e-14;3!UBERON:0004647;1.71e-14;3!UBERON:0000353;1.42e-11;15!UBERON:0002107;2.36e-09;19!UBERON:0006925;2.36e-09;19!UBERON:0000200;6.55e-08;6!UBERON:0002423;2.43e-07;25!UBERON:0001871;5.86e-07;6!UBERON:0003513;5.86e-07;7!UBERON:0000074;5.86e-07;7!UBERON:0001229;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,3.81e-21,2;UBERON:0001281,5.70e-21,2;UBERON:0003497,5.70e-21,2;UBERON:0003909,5.70e-21,2;UBERON:0003835,5.70e-21,2;UBERON:0001280,1.83e-14,3;UBERON:0004647,1.83e-14,3;UBERON:0005171,1.83e-14,3;UBERON:0000353,1.42e-11,15;UBERON:0000058,2.36e-09,19;UBERON:0002107,2.56e-09,19;UBERON:0006925,2.56e-09,19;UBERON:0008836,2.56e-09,19;UBERON:0008835,3.51e-08,22;UBERON:0003894,3.51e-08,22;UBERON:0000200,5.92e-08,6;UBERON:0002394,6.78e-08,6;UBERON:0003928,6.78e-08,6;UBERON:0009854,7.23e-08,23;UBERON:0005172,2.27e-07,54;UBERON:0005173,2.27e-07,54;UBERON:0007499,2.58e-07,25;UBERON:0009497,2.58e-07,25;UBERON:0000015,2.58e-07,25;UBERON:0002423,2.58e-07,25;UBERON:0006235,2.58e-07,25;UBERON:0004161,2.58e-07,25;UBERON:0009856,4.55e-07,26;UBERON:0001871,5.38e-07,6;UBERON:0010532,5.70e-07,7;UBERON:0000074,5.70e-07,7;UBERON:0001229,5.70e-07,7;UBERON:0001230,5.70e-07,7;UBERON:0003220,5.70e-07,7;UBERON:0005749,5.70e-07,7;UBERON:0004199,5.70e-07,7;UBERON:0004209,5.70e-07,7;UBERON:0004198,5.70e-07,7;UBERON:0003513,6.04e-07,7 | |||
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|short_description=p2@ENST00000540989 | |||
}} |
Revision as of 13:44, 11 September 2013
Short description: | p2@ENST00000540989 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000540989_5end |
Coexpression cluster: | NA |
Association with transcript: | -171bp_to_ENST00000540989_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 5.70e-21 | 2 |
endothelial cell of hepatic sinusoid | 5.70e-21 | 2 |
hepatocyte | 3.84e-14 | 12 |
glomerular endothelial cell | 2.97e-09 | 5 |
macrophage | 5.54e-08 | 6 |
glomerular cell | 5.70e-07 | 7 |
kidney corpuscule cell | 5.70e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.