FFCP PHASE1:Hg19::chr16:89930250..89930272,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-393bp_to_AK098674_5end|coexpression_cluster_id=C411|description=CAGE_peak_1_at_AK098674_5end|id=chr16:89930250..89930272,-|ontology_enrichment_celltype=CL:0002031!1.08e-19!124;CL:0000738!7.62e-19!140;CL:0002057!3.93e-17!42;CL:0000557!6.62e-16!71;CL:0000860!1.56e-15!45;CL:0002087!2.21e-15!119;CL:0000839!6.61e-15!70;CL:0002032!1.25e-14!165;CL:0000837!1.25e-14!165;CL:0000037!2.63e-14!172;CL:0000566!2.63e-14!172;CL:0000766!3.38e-14!76;CL:0000988!1.70e-13!182;CL:0002009!1.30e-11!65;CL:0002194!5.37e-11!63;CL:0000576!5.37e-11!63;CL:0000040!5.37e-11!63;CL:0000559!5.37e-11!63;CL:0000763!6.56e-10!112;CL:0000049!6.56e-10!112;CL:0002274!1.28e-09!5;CL:0000457!1.28e-09!5;CL:0002191!1.28e-09!5;CL:0000097!1.28e-09!5;CL:0000831!1.28e-09!5;CL:0002028!1.28e-09!5|ontology_enrichment_celltype_v019=CL:0002127;2.62e-10;1!CL:0000911;2.62e-10;1!CL:0000814;2.62e-10;1!CL:0000097;2.99e-08;5|ontology_enrichment_celltype_v019_2=CL:0002127,4.75e-10,1;CL:0000914,4.75e-10,1;CL:0000911,4.75e-10,1;CL:0000814,4.75e-10,1;CL:0002042,4.75e-10,1;CL:0002039,4.75e-10,1;CL:0002040,4.75e-10,1;CL:0002041,4.75e-10,1;CL:0000097,3.27e-08,5;CL:0002028,3.27e-08,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.32e-20!102;UBERON:0003061!5.32e-20!102;UBERON:0002193!1.71e-19!112;UBERON:0007023!3.14e-17!115;UBERON:0002371!3.79e-13!80;UBERON:0002405!2.58e-12!115;UBERON:0001474!1.21e-11!86;UBERON:0004765!1.00e-08!101;UBERON:0001434!1.00e-08!101;UBERON:0002298!5.79e-08!8;UBERON:0003081!6.11e-08!216;UBERON:0004177!9.53e-07!7|ontology_enrichment_uberon_v019=UBERON:0000996;6.73e-11;1!UBERON:0002038;1.24e-10;1!UBERON:0009661;1.24e-10;1!UBERON:0002950;1.24e-10;1!UBERON:0001891;1.24e-10;1!UBERON:0002134;2.62e-10;1!UBERON:0005208;2.62e-10;1!UBERON:0004145;2.62e-10;1!UBERON:0005946;2.62e-10;1!UBERON:0005965;2.62e-10;1!UBERON:0002078;2.62e-10;1!UBERON:0004177;1.76e-08;5!UBERON:0005057;1.76e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.14e-12,7;UBERON:0005057,2.14e-12,7;UBERON:0000996,6.73e-11,1;UBERON:0002038,1.19e-10,1;UBERON:0009661,1.19e-10,1;UBERON:0002950,1.19e-10,1;UBERON:0001891,1.19e-10,1;UBERON:0009616,1.19e-10,1;UBERON:0010286,1.19e-10,1;UBERON:0002134,2.28e-10,1;UBERON:0005208,2.28e-10,1;UBERON:0005946,2.28e-10,1;UBERON:0005965,2.28e-10,1;UBERON:0002078,2.28e-10,1;UBERON:0002370,4.76e-10,4;UBERON:0005058,4.76e-10,4;UBERON:0009113,4.76e-10,4;UBERON:0003295,4.76e-10,4;UBERON:0005562,4.76e-10,4;UBERON:0002390,2.60e-09,98;UBERON:0003061,2.60e-09,98;UBERON:0002193,2.68e-08,108;UBERON:0002405,3.82e-08,93;UBERON:0003351,5.58e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.485168122375632,0.232429036905685,0.411167888021826,1.85823822537062,0,0.256160706529101,1.6553756092201,0.689491361473237,0,1.35426486594342,0.188242339542605,0.545812300115692,1.34834090667051,0,0.641858054152187,1.91801137739712,0,0.598390972864896,0.852449501065388,0.290209238628584,0.56738522469114,0.622822248995575,0,0,0.65156653411535,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0.328875809207352,1.10540007114339,0.869409257205157,0.296573126324121,0,0,0.339928028092699,0.383220493601921,0,0,0.318565414324097,0.651083453856419,0.950452044448374,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30979075497713,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.44024217006613,1.24396869324463,0.288239906833923,3.28230326908588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,0,0.646882724578552,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,5.46117361732928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.74277184738353,0,0,0,0,1.01489521846434,0.764637207142375,0.569647187174163,0.476463550915578,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0,0,0,0,0.439524537815682,0,0.445773537109913,0,0,0,0,0,0.562677665642051,0,0.16480387422676,0,1.9924798825107,0,0,0,0.738508832766417,0,0,0,0,0.394573622547734,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-393bp_to_AK098674_5end | |||
|coexpression_cluster_id=C411 | |||
|description=CAGE_peak_1_at_AK098674_5end | |||
|id=chr16:89930250..89930272,- | |||
|ontology_enrichment_celltype=CL:0002031!1.08e-19!124;CL:0000738!7.62e-19!140;CL:0002057!3.93e-17!42;CL:0000557!6.62e-16!71;CL:0000860!1.56e-15!45;CL:0002087!2.21e-15!119;CL:0000839!6.61e-15!70;CL:0002032!1.25e-14!165;CL:0000837!1.25e-14!165;CL:0000037!2.63e-14!172;CL:0000566!2.63e-14!172;CL:0000766!3.38e-14!76;CL:0000988!1.70e-13!182;CL:0002009!1.30e-11!65;CL:0002194!5.37e-11!63;CL:0000576!5.37e-11!63;CL:0000040!5.37e-11!63;CL:0000559!5.37e-11!63;CL:0000763!6.56e-10!112;CL:0000049!6.56e-10!112;CL:0002274!1.28e-09!5;CL:0000457!1.28e-09!5;CL:0002191!1.28e-09!5;CL:0000097!1.28e-09!5;CL:0000831!1.28e-09!5;CL:0002028!1.28e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.62e-10;1!CL:0000911;2.62e-10;1!CL:0000814;2.62e-10;1!CL:0000097;2.99e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,4.75e-10,1;CL:0000914,4.75e-10,1;CL:0000911,4.75e-10,1;CL:0000814,4.75e-10,1;CL:0002042,4.75e-10,1;CL:0002039,4.75e-10,1;CL:0002040,4.75e-10,1;CL:0002041,4.75e-10,1;CL:0000097,3.27e-08,5;CL:0002028,3.27e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.32e-20!102;UBERON:0003061!5.32e-20!102;UBERON:0002193!1.71e-19!112;UBERON:0007023!3.14e-17!115;UBERON:0002371!3.79e-13!80;UBERON:0002405!2.58e-12!115;UBERON:0001474!1.21e-11!86;UBERON:0004765!1.00e-08!101;UBERON:0001434!1.00e-08!101;UBERON:0002298!5.79e-08!8;UBERON:0003081!6.11e-08!216;UBERON:0004177!9.53e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000996;6.73e-11;1!UBERON:0002038;1.24e-10;1!UBERON:0009661;1.24e-10;1!UBERON:0002950;1.24e-10;1!UBERON:0001891;1.24e-10;1!UBERON:0002134;2.62e-10;1!UBERON:0005208;2.62e-10;1!UBERON:0004145;2.62e-10;1!UBERON:0005946;2.62e-10;1!UBERON:0005965;2.62e-10;1!UBERON:0002078;2.62e-10;1!UBERON:0004177;1.76e-08;5!UBERON:0005057;1.76e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.14e-12,7;UBERON:0005057,2.14e-12,7;UBERON:0000996,6.73e-11,1;UBERON:0002038,1.19e-10,1;UBERON:0009661,1.19e-10,1;UBERON:0002950,1.19e-10,1;UBERON:0001891,1.19e-10,1;UBERON:0009616,1.19e-10,1;UBERON:0010286,1.19e-10,1;UBERON:0002134,2.28e-10,1;UBERON:0005208,2.28e-10,1;UBERON:0005946,2.28e-10,1;UBERON:0005965,2.28e-10,1;UBERON:0002078,2.28e-10,1;UBERON:0002370,4.76e-10,4;UBERON:0005058,4.76e-10,4;UBERON:0009113,4.76e-10,4;UBERON:0003295,4.76e-10,4;UBERON:0005562,4.76e-10,4;UBERON:0002390,2.60e-09,98;UBERON:0003061,2.60e-09,98;UBERON:0002193,2.68e-08,108;UBERON:0002405,3.82e-08,93;UBERON:0003351,5.58e-07,6 | |||
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|short_description=p1@AK098674 | |||
}} |
Revision as of 12:08, 11 September 2013
Short description: | p1@AK098674 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AK098674_5end |
Coexpression cluster: | C411_vagina_Mast_breast_heart_CD14_aorta_liver |
Association with transcript: | -393bp_to_AK098674_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 4.75e-10 | 1 |
immature NK T cell | 4.75e-10 | 1 |
effector T cell | 4.75e-10 | 1 |
mature NK T cell | 4.75e-10 | 1 |
immature NK T cell stage IV | 4.75e-10 | 1 |
immature NK T cell stage I | 4.75e-10 | 1 |
immature NK T cell stage II | 4.75e-10 | 1 |
immature NK T cell stage III | 4.75e-10 | 1 |
mast cell | 3.27e-08 | 5 |
basophil mast progenitor cell | 3.27e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.14e-12 | 7 |
immune organ | 2.14e-12 | 7 |
vagina | 6.73e-11 | 1 |
substantia nigra | 1.19e-10 | 1 |
midbrain nucleus | 1.19e-10 | 1 |
regional part of midbrain | 1.19e-10 | 1 |
midbrain | 1.19e-10 | 1 |
presumptive midbrain | 1.19e-10 | 1 |
midbrain neural tube | 1.19e-10 | 1 |
tricuspid valve | 2.28e-10 | 1 |
right atrium valve | 2.28e-10 | 1 |
outflow tract of atrium | 2.28e-10 | 1 |
outflow part of right atrium | 2.28e-10 | 1 |
right cardiac atrium | 2.28e-10 | 1 |
thymus | 4.76e-10 | 4 |
hemolymphoid system gland | 4.76e-10 | 4 |
thymic region | 4.76e-10 | 4 |
pharyngeal gland | 4.76e-10 | 4 |
thymus primordium | 4.76e-10 | 4 |
hematopoietic system | 2.60e-09 | 98 |
blood island | 2.60e-09 | 98 |
hemolymphoid system | 2.68e-08 | 108 |
immune system | 3.82e-08 | 93 |
pharyngeal epithelium | 5.58e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.