FFCP PHASE1:Hg19::chr16:23690160..23690176,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5347|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9077|TSSclassifier=S|UniProt=P53350|association_with_transcript=17bp_to_ENST00000300093_5end|coexpression_cluster_id=C747|description=CAGE_peak_2_at_PLK1_5end|id=chr16:23690160..23690176,+|ontology_enrichment_celltype=CL:0000548!4.03e-20!679;CL:0000004!4.03e-20!679;CL:0000255!4.03e-20!679;CL:0000012!7.46e-20!682;CL:0000066!1.49e-18!254;CL:0002321!4.36e-13!248;CL:0000220!1.94e-12!246;CL:0000003!2.19e-11!722;CL:0000144!3.91e-09!625;CL:0000063!1.35e-08!578;CL:1000497!7.46e-07!18;CL:0002518!7.46e-07!18;CL:1000449!8.42e-07!16|ontology_enrichment_celltype_v019=CL:1000497;8.87e-08;17!CL:0002518;8.87e-08;17!CL:1000449;8.98e-08;15|ontology_enrichment_celltype_v019_2=CL:0000066,1.24e-15,253;CL:0002321,9.82e-10,250;CL:1000497,7.48e-08,17;CL:0002518,7.48e-08,17;CL:1000449,7.53e-08,15|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!3.34e-33!235;DOID:14566!2.48e-32!239;DOID:2531!3.29e-20!51;DOID:0060083!3.29e-20!51;DOID:0050686!1.25e-17!137;DOID:1240!1.43e-15!39;DOID:0050687!2.49e-13!143;DOID:8692!4.67e-12!31;DOID:305!2.84e-11!106|ontology_enrichment_disease_v019=DOID:2531;1.82e-13;51!DOID:0060083;1.82e-13;51!DOID:1240;3.13e-13;39!DOID:8692;2.71e-12;31|ontology_enrichment_disease_v019_2=DOID:162,2.51e-30,235;DOID:14566,1.05e-29,239;DOID:2531,8.06e-22,51;DOID:0060083,8.06e-22,51;DOID:0050686,4.76e-17,137;DOID:1240,8.86e-17,39;DOID:8692,5.81e-13,31;DOID:0050687,6.24e-11,143;DOID:305,2.97e-09,106|ontology_enrichment_uberon=UBERON:0004211!8.42e-07!16;UBERON:0001285!8.42e-07!16;UBERON:0007684!8.42e-07!16;UBERON:0003220!8.42e-07!16;UBERON:0004208!8.42e-07!16|ontology_enrichment_uberon_v019=UBERON:0006555;8.98e-08;15!UBERON:0004819;8.98e-08;15!UBERON:0001285;8.98e-08;15!UBERON:0007684;8.98e-08;15!UBERON:0002113;5.23e-07;24!UBERON:0011143;5.23e-07;24!UBERON:0001851;5.53e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0004211,7.53e-08,15;UBERON:0009773,7.53e-08,15;UBERON:0001231,7.53e-08,15;UBERON:0001285,7.53e-08,15;UBERON:0007684,7.53e-08,15;UBERON:0004208,7.53e-08,15;UBERON:0001851,5.33e-07,15;UBERON:0006555,6.19e-07,16;UBERON:0004819,6.19e-07,16|phase1_expression=0,0.856402095563933,0,0,0,0,0,0,0,6.14334841253772,18.8406315352555,3.27662058195258,1.05506791291381,0.247532705920093,0,0.672325146451775,0.602694528023977,0,0,8.98783723960552,9.18003110599138,0.940364164434263,5.15224776835902,5.47497700291537,4.2684497462233,8.48188803802259,11.1656801651926,10.0749800081509,0,0,0.309632246632152,7.35536979583142,11.1446189947953,1.47901604066715,10.0707360754392,4.69158467208491,2.34880351467878,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,3.68737718685108,0,0,0,0.167186495390678,0,0,0,0.891283655081389,0,0,0,0.896639238079726,1.04047478047903,0.657751618414705,1.10540007114339,1.15921234294021,0,0,0,2.37949619664889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,2.01210257911091,2.42938867502708,3.2529523714611,0.50133791063589,0.434539556882471,0,0,3.02511414925017,2.21729397462564,2.10803485663503,8.31717129410475,6.9216104775583,7.78647329847302,0.324547393654683,0,0,0,0,0,5.16782259153433,0.860234595106124,1.73570250803797,2.26123176769604,2.09749718104953,4.67700671298115,9.8227634272301,0.516833518338658,0.35576626268671,0,3.62546385398232,2.28081631715554,1.70843440283719,3.30896772311282,0,5.26868396876071,6.28682243353275,6.75668882899933,1.53316637465883,11.3911879148175,5.67925406184263,0,0,3.48875241714027,0,2.5326102332916,0,3.15520282823695,4.61068896857864,0,1.06748995729705,0.98667019366864,0.933633106199299,2.15537075311501,3.26923806226917,0.756787138224657,0,9.60717870518566,0.936480230490962,5.70471821544449,1.34503812496621,6.92863541998213,5.01806127541208,7.58434356192142,1.02077085627447,6.01888154827663,1.34323515528495,0,0.741800787835671,8.19145225744224,3.59309070908119,7.23845290002485,5.63033339423839,2.21651292387346,1.75591048352335,1.22595118319608,0.901428353439581,5.21788042536097,3.40840307808838,0,0.211931901159562,5.10154863343484,1.13357782162283,0.515281080091258,0.18611685633159,3.54430297706659,1.75386609290158,2.01947019395292,0.184099797284599,0,2.84007674013291,2.31729825923573,2.20428770003634,0.773043412653187,2.45471508531751,2.29443676311203,6.34263271873896,9.80720285578991,6.62305474356255,3.62813692553797,9.58819233327388,4.74470566798579,0,0.643240938192885,9.66944449467364,0,0,8.39978280282892,5.56329477257736,5.06123162755312,6.83822630940842,8.06153943141903,8.54174228799948,4.98875840192608,4.90553662813365,3.46272441251751,1.4763109092493,5.60967095213783,2.057870056657,0,0,0,0.590789906681404,6.62194649121976,3.44367627920718,3.08822058537346,0.329250856225877,1.1240175325762,3.71957197923034,1.75918045801206,6.84197441151682,9.35941306751621,4.3299402607582,1.62302566965108,0.234817388471643,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5347 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9077 | |||
|TSSclassifier=S | |||
|UniProt=P53350 | |||
|association_with_transcript=17bp_to_ENST00000300093_5end | |||
|coexpression_cluster_id=C747 | |||
|description=CAGE_peak_2_at_PLK1_5end | |||
|id=chr16:23690160..23690176,+ | |||
|ontology_enrichment_celltype=CL:0000548!4.03e-20!679;CL:0000004!4.03e-20!679;CL:0000255!4.03e-20!679;CL:0000012!7.46e-20!682;CL:0000066!1.49e-18!254;CL:0002321!4.36e-13!248;CL:0000220!1.94e-12!246;CL:0000003!2.19e-11!722;CL:0000144!3.91e-09!625;CL:0000063!1.35e-08!578;CL:1000497!7.46e-07!18;CL:0002518!7.46e-07!18;CL:1000449!8.42e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000497;8.87e-08;17!CL:0002518;8.87e-08;17!CL:1000449;8.98e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.24e-15,253;CL:0002321,9.82e-10,250;CL:1000497,7.48e-08,17;CL:0002518,7.48e-08,17;CL:1000449,7.53e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.34e-33!235;DOID:14566!2.48e-32!239;DOID:2531!3.29e-20!51;DOID:0060083!3.29e-20!51;DOID:0050686!1.25e-17!137;DOID:1240!1.43e-15!39;DOID:0050687!2.49e-13!143;DOID:8692!4.67e-12!31;DOID:305!2.84e-11!106 | |||
|ontology_enrichment_disease_v019=DOID:2531;1.82e-13;51!DOID:0060083;1.82e-13;51!DOID:1240;3.13e-13;39!DOID:8692;2.71e-12;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.51e-30,235;DOID:14566,1.05e-29,239;DOID:2531,8.06e-22,51;DOID:0060083,8.06e-22,51;DOID:0050686,4.76e-17,137;DOID:1240,8.86e-17,39;DOID:8692,5.81e-13,31;DOID:0050687,6.24e-11,143;DOID:305,2.97e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0004211!8.42e-07!16;UBERON:0001285!8.42e-07!16;UBERON:0007684!8.42e-07!16;UBERON:0003220!8.42e-07!16;UBERON:0004208!8.42e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;8.98e-08;15!UBERON:0004819;8.98e-08;15!UBERON:0001285;8.98e-08;15!UBERON:0007684;8.98e-08;15!UBERON:0002113;5.23e-07;24!UBERON:0011143;5.23e-07;24!UBERON:0001851;5.53e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,7.53e-08,15;UBERON:0009773,7.53e-08,15;UBERON:0001231,7.53e-08,15;UBERON:0001285,7.53e-08,15;UBERON:0007684,7.53e-08,15;UBERON:0004208,7.53e-08,15;UBERON:0001851,5.33e-07,15;UBERON:0006555,6.19e-07,16;UBERON:0004819,6.19e-07,16 | |||
|phase1_expression=0,0.856402095563933,0,0,0,0,0,0,0,6.14334841253772,18.8406315352555,3.27662058195258,1.05506791291381,0.247532705920093,0,0.672325146451775,0.602694528023977,0,0,8.98783723960552,9.18003110599138,0.940364164434263,5.15224776835902,5.47497700291537,4.2684497462233,8.48188803802259,11.1656801651926,10.0749800081509,0,0,0.309632246632152,7.35536979583142,11.1446189947953,1.47901604066715,10.0707360754392,4.69158467208491,2.34880351467878,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,0,0,0,0,3.68737718685108,0,0,0,0.167186495390678,0,0,0,0.891283655081389,0,0,0,0.896639238079726,1.04047478047903,0.657751618414705,1.10540007114339,1.15921234294021,0,0,0,2.37949619664889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,2.01210257911091,2.42938867502708,3.2529523714611,0.50133791063589,0.434539556882471,0,0,3.02511414925017,2.21729397462564,2.10803485663503,8.31717129410475,6.9216104775583,7.78647329847302,0.324547393654683,0,0,0,0,0,5.16782259153433,0.860234595106124,1.73570250803797,2.26123176769604,2.09749718104953,4.67700671298115,9.8227634272301,0.516833518338658,0.35576626268671,0,3.62546385398232,2.28081631715554,1.70843440283719,3.30896772311282,0,5.26868396876071,6.28682243353275,6.75668882899933,1.53316637465883,11.3911879148175,5.67925406184263,0,0,3.48875241714027,0,2.5326102332916,0,3.15520282823695,4.61068896857864,0,1.06748995729705,0.98667019366864,0.933633106199299,2.15537075311501,3.26923806226917,0.756787138224657,0,9.60717870518566,0.936480230490962,5.70471821544449,1.34503812496621,6.92863541998213,5.01806127541208,7.58434356192142,1.02077085627447,6.01888154827663,1.34323515528495,0,0.741800787835671,8.19145225744224,3.59309070908119,7.23845290002485,5.63033339423839,2.21651292387346,1.75591048352335,1.22595118319608,0.901428353439581,5.21788042536097,3.40840307808838,0,0.211931901159562,5.10154863343484,1.13357782162283,0.515281080091258,0.18611685633159,3.54430297706659,1.75386609290158,2.01947019395292,0.184099797284599,0,2.84007674013291,2.31729825923573,2.20428770003634,0.773043412653187,2.45471508531751,2.29443676311203,6.34263271873896,9.80720285578991,6.62305474356255,3.62813692553797,9.58819233327388,4.74470566798579,0,0.643240938192885,9.66944449467364,0,0,8.39978280282892,5.56329477257736,5.06123162755312,6.83822630940842,8.06153943141903,8.54174228799948,4.98875840192608,4.90553662813365,3.46272441251751,1.4763109092493,5.60967095213783,2.057870056657,0,0,0,0.590789906681404,6.62194649121976,3.44367627920718,3.08822058537346,0.329250856225877,1.1240175325762,3.71957197923034,1.75918045801206,6.84197441151682,9.35941306751621,4.3299402607582,1.62302566965108,0.234817388471643,1.29929802984966,1.38895653772983,1.52203321787679,3.95102198979638,3.43394464837949,0.492434012174795,0.234004265139238,1.63494278517601,0,0.671928512795438,0.425325291727159,3.04498977189684,3.48760726216754,17.2522205624345,0,0.880484340132261,0,0,0,2.03193261734941,2.29193055334967,2.34434894420094,6.84289784090821,1.43958489784653,2.40274446275134,0.285826432630578,7.06425831375773,3.92364061949952,3.5202377194056,0,3.57656445851882,7.607724773004,0,1.04007436911366,9.00225809917497,9.92943924162948,8.52550972851518,0.57191197463259,0.542621605391443,1.64648067356154,8.46914079163711,0.710783897485092,11.087326221068,0,0,0.99972991182057,0,0,0,0.958499421966331,0,2.85273810081437,0.579125226670317,1.02738161275192,2.14873155887875,5.60425719967636,0,0,0,3.04913549066956,0,2.31986643833309,1.50764638800914,0,0,0,0,0,0,0.271265023699736,0,0.356857977594324,0.157702415033935,0.35142424497814,0,0,1.03473071292505,4.64957918974806,2.94990669666725,1.82455590382974,0.979005787313703,0,0,0,0,1.5156378572313,4.99306318531491,3.62868351995616,0,0.460385919864187,0.561320188866147,0,0,0,1.48418066444991,3.08419387605311,1.42049380250502,2.95657761649713,4.15403543346897,2.67283870457906,2.1754700926492,0,0,5.85553685639494,6.00900854422166,0,12.6335891614075,1.84836809050595,20.3930939985982,14.6139224653261,2.32213583564327,6.8240030442538,5.95327968467805,3.67057057373637,7.71136263451447,5.41892875087706,3.01013864312912,8.15604073744123,6.64860807142979,9.40273969833149,4.60445740956463,4.70583811844821,6.41125312790973,3.28014645699706,0,0.206082023295445,4.67004270573551,3.13536099698234,4.59412430396938,4.55042172225565,1.6068392984416,0.676695028044854,4.46740989632469,4.1445992176055,4.68644346447404,3.43744783578476,2.46528379654188,5.02837101754995,0.979352392114111,0,0.384380134730212,2.16941611240793,0,0.929691098594572,0.31481234683064,4.1822236209636,1.54016790088044,2.12922412126809,3.47973196830029,0.37064843820784,0.286249773483982,0.744316738719335,1.2655176988749,1.5250415513906,3.58256907835867,0.42793898803392,2.22742273548156,1.56989728039846,0.899362287916574,1.64722217841633,2.12062324222236,2.42618977887979,0,2.10629228119491,9.75267478179181,0,2.1130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| |||
|short_description=p2@PLK1 | |||
}} |
Revision as of 09:43, 11 September 2013
Short description: | p2@PLK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PLK1_5end |
Coexpression cluster: | C747_Mesenchymal_alveolar_Trabecular_Alveolar_carcinoid_Renal_chronic |
Association with transcript: | 17bp_to_ENST00000300093_5end |
EntrezGene: | PLK1 |
HGNC: | 9077 |
UniProt: | P53350 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.24e-15 | 253 |
embryonic cell | 9.82e-10 | 250 |
kidney cell | 7.48e-08 | 17 |
kidney epithelial cell | 7.48e-08 | 17 |
epithelial cell of nephron | 7.53e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 7.53e-08 | 15 |
renal tubule | 7.53e-08 | 15 |
nephron tubule | 7.53e-08 | 15 |
nephron | 7.53e-08 | 15 |
uriniferous tubule | 7.53e-08 | 15 |
nephrogenic mesenchyme | 7.53e-08 | 15 |
cortex | 5.33e-07 | 15 |
excretory tube | 6.19e-07 | 16 |
kidney epithelium | 6.19e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.51e-30 | 235 |
disease of cellular proliferation | 1.05e-29 | 239 |
hematologic cancer | 8.06e-22 | 51 |
immune system cancer | 8.06e-22 | 51 |
organ system cancer | 4.76e-17 | 137 |
leukemia | 8.86e-17 | 39 |
myeloid leukemia | 5.81e-13 | 31 |
cell type cancer | 6.24e-11 | 143 |
carcinoma | 2.97e-09 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.