FFCP PHASE1:Hg19::chr15:56035257..56035355,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=283659 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26373 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000561292_5end | |||
|coexpression_cluster_id=C1742 | |||
|description=CAGE_peak_1_at_PRTG_5end | |||
|id=chr15:56035257..56035355,- | |||
|ontology_enrichment_celltype=CL:0000066!9.32e-10!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.45e-10,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.14e-08;29!UBERON:0003104;1.94e-07;31 | |||
|ontology_enrichment_disease=DOID:0050687!9.73e-14!143;DOID:305!5.09e-12!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.42e-14,143;DOID:305,1.83e-12,106;DOID:162,8.25e-07,235;DOID:14566,8.74e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000481!2.88e-17!347;UBERON:0000477!5.81e-14!286;UBERON:0000119!8.14e-14!312;UBERON:0000483!3.03e-13!309;UBERON:0000468!1.64e-12!659;UBERON:0000922!2.52e-12!612;UBERON:0000064!3.14e-12!219;UBERON:0005743!1.22e-11!86;UBERON:0000073!1.69e-11!94;UBERON:0001016!1.69e-11!94;UBERON:0005177!6.69e-11!107;UBERON:0000025!7.18e-11!194;UBERON:0004111!9.71e-11!241;UBERON:0000062!1.17e-10!511;UBERON:0001017!1.90e-10!82;UBERON:0000467!3.04e-10!625;UBERON:0000480!5.12e-10!626;UBERON:0002050!9.09e-10!605;UBERON:0005423!9.09e-10!605;UBERON:0000475!1.72e-09!365;UBERON:0000923!1.83e-09!604;UBERON:0005291!1.83e-09!604;UBERON:0006598!1.83e-09!604;UBERON:0002532!1.83e-09!604;UBERON:0003075!3.10e-09!86;UBERON:0007284!3.10e-09!86;UBERON:0000955!1.40e-08!69;UBERON:0006238!1.40e-08!69;UBERON:0001048!3.04e-08!168;UBERON:0000489!6.71e-08!32;UBERON:0003104!8.87e-08!238;UBERON:0009142!8.87e-08!238;UBERON:0004121!1.09e-07!169;UBERON:0002346!1.25e-07!90;UBERON:0000466!2.20e-07!126;UBERON:0001007!3.93e-07!155;UBERON:0001555!3.93e-07!155;UBERON:0007026!3.93e-07!155;UBERON:0000160!5.18e-07!27;UBERON:0005172!6.24e-07!55;UBERON:0005173!6.24e-07!55;UBERON:0001049!7.67e-07!57;UBERON:0005068!7.67e-07!57;UBERON:0006241!7.67e-07!57;UBERON:0007135!7.67e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000489;3.73e-08;29!UBERON:0002113;9.32e-07;24!UBERON:0011143;9.32e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,3.64e-13,223;UBERON:0001016,7.74e-11,89;UBERON:0001017,8.29e-11,81;UBERON:0005177,1.02e-10,101;UBERON:0000119,4.74e-10,309;UBERON:0000483,1.49e-09,306;UBERON:0000955,5.59e-09,68;UBERON:0006238,5.59e-09,68;UBERON:0000025,1.47e-08,192;UBERON:0004111,1.54e-08,240;UBERON:0000489,2.03e-08,31;UBERON:0003075,2.30e-08,82;UBERON:0007284,2.30e-08,82;UBERON:0000922,1.09e-07,592;UBERON:0010314,2.97e-07,132;UBERON:0001049,4.56e-07,56;UBERON:0005068,4.56e-07,56;UBERON:0006241,4.56e-07,56;UBERON:0007135,4.56e-07,56;UBERON:0002113,4.93e-07,26;UBERON:0003918,4.93e-07,26;UBERON:0011143,4.93e-07,26;UBERON:0005095,4.93e-07,26;UBERON:0007687,4.93e-07,26;UBERON:0002346,4.98e-07,86;UBERON:0005172,7.19e-07,54;UBERON:0005173,7.19e-07,54 | |||
|phase1_expression=1.2717486548939,0.642301571672949,0.422863212287913,1.0007329835313,1.34088328328186,0.872338524100369,0,0.631719873426831,0.522371256399677,1.22866968250754,1.39560233594486,18.7859580031948,8.17677632508206,1.48519623552056,1.32558950291166,0.672325146451775,1.20538905604795,0,1.46379839637152,8.24911089114479,8.56802903225863,5.01527554364941,4.29353980696585,5.47497700291537,4.5195350254129,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0.59675003159727,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,4.69490601792545,2.04580098949649,1.0843174571537,1.50401373190767,1.73815822752988,2.3858578411533,2.43317435151318,8.50813354476611,6.87361132133948,5.27008714158756,10.2163678888216,0,0,0,0.174129737299267,0,0,0,0,1.19257444420023,0.860234595106124,0.694281003215189,1.13061588384802,1.67799774483962,1.10047216776027,1.46296476575767,6.46041897923322,11.3845204059747,9.70689777017544,0.805658634218294,4.56163263431108,1.46437234528902,3.30896772311282,1.62028389576352,16.4311500042707,17.9623498100936,15.3151613457318,9.19899824795299,5.69559395740877,5.86245580577303,0,0,0.436094052142534,1.49091585508596,2.65924074495618,0.264818361626438,8.3182620017156,1.77334191099179,1.68203280042692,1.06748995729705,0.74000264525148,6.53543174339509,4.17603083416033,4.08654757783647,7.41651395460164,5.76175924479999,2.34321431833797,1.24864030732128,0.570471821544449,2.98897361103602,0.939475989150119,0.647491777472526,0.280901613404497,2.85815839756851,3.19369225010597,2.6864703105699,4.75201142912821,1.23633464639278,0,2.87447256726495,3.36672227908132,2.75260743718321,1.10825646193673,0.877955241761676,0.30648779579902,1.50238058906597,0.680593098960126,0.538168907066586,0,0,0,0.206105058476878,0.515281080091258,0.930584281657949,0.506328996723799,0.0974370051611986,0.252433774244115,0,1.13152239773168,0.710019185033229,0,1.01736355386293,0,0,0,20.1256615113832,20.5421140898302,54.1463773771956,112.264922581646,32.2970689120804,17.8838905947157,1.56449532329816,0.643240938192885,0,0,0,4.96888560167344,4.04603256187444,5.78426471720357,5.73528658208448,6.53638332277218,6.64357733511071,4.44943316928543,5.29797955838434,4.23221872641029,22.8828190933641,1.40241773803446,2.057870056657,4.41026134156626,0,0.982827216677626,1.77236972004421,0,11.5609132230527,1.88724591328378,0,0,0.100528972411631,0,0.977424915930974,4.15973914111831,0,4.63721619900307,1.40890433082986,2.45422961193825,2.77791307545966,2.85381228351897,0.790204397959275,2.57545848628462,0,0,0,0,0,0.141775097242386,0.626909658919938,0.871901815541886,0.383382679165211,0,0,0,0,0,2.98440103173194,3.4378958300245,7.03304683260282,0,3.39330725920968,6.30720421472227,7.14566081576446,5.49442313292267,6.10344096366592,3.6669142910475,0.258543431515556,0,3.381211010224,1.06375246633948,0,1.80045161983499,0,1.5985330740966,1.71573592389777,2.17048642156577,1.64648067356154,2.93162565864362,0.710783897485092,3.16780749173372,0.904318131178758,0,0.499864955910285,0,0,0,0.239624855491583,0,0,0.868687840005475,1.43833425785268,1.43248770591916,0,0,0,0,2.7950408664471,2.60279707715243,2.31986643833309,0.335032530668698,1.27587750330633,0,0,0,2.94459580125936,0,3.52644530809656,1.45579603071565,3.7470087647404,0.946214490203608,1.05427273493442,0.300946099727719,0,1.03473071292505,2.65690239414175,1.10621501125022,4.69171518127647,1.95801157462741,0.686286847621712,0,0,0.106727557803444,3.03127571446259,1.66435439510497,2.11673205330776,0.744323423456331,1.99500565274481,0,0.896974044789907,1.02341449813341,0.965123526861645,1.48418066444991,2.31314540703983,1.24293207719189,1.64254312027618,0,1.27831416305955,22.721576523225,0,0,0.574072240823034,5.28064387219479,2.88473712910733,5.86559496779635,6.00719629414435,2.35304930753057,1.46139224653261,8.02192379585855,15.9226737699255,7.14393562161366,10.3639639729027,9.25363516141736,4.6060894382455,5.51858751240339,4.58777291481069,1.66215201785745,4.25362033972139,0,0,3.84675187674584,5.576248976895,10.4121086292577,5.35813260568156,13.9185586523882,16.9969569836411,0,0,0,4.44685304143761,5.85384745035649,5.67963596486679,4.27293374702045,4.40423003959922,6.23571783831183,6.30677042879147,2.93805717634233,0,0,0.127612712494584,0,0,2.83331112147576,1.3940745403212,0.924100740528266,0.532306030317022,0.869932992075073,0.74129687641568,1.28812398067792,2.60510858551767,2.53103539774981,1.33441135746677,2.303080121802,1.71175595213568,0.636406495851874,0,7.19489830333259,6.86342574340137,5.53718291024726,0.808729926293264,0,2.10629228119491,1.95053495635836,0.487426979262569,2.11300293513511,2.59349831675173,0.282810863907425,0,1.10273068709225,0,0.876901770507525,0.578775534266688,3.27947376023316,0.202910376962704,0.6196469961995,0.845086807596724,2.00775893085672,0.88424136911809,0,1.06428319221179,1.055538176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| |||
|short_description=p1@PRTG | |||
}} |
Revision as of 07:31, 11 September 2013
Short description: | p1@PRTG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PRTG_5end |
Coexpression cluster: | C1742_teratocarcinoma_H9_hepatoblastoma_pancreatic_choriocarcinoma_pineal_mesodermal |
Association with transcript: | 0bp_to_ENST00000561292_5end |
EntrezGene: | PRTG |
HGNC: | 26373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.45e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 3.64e-13 | 223 |
nervous system | 7.74e-11 | 89 |
central nervous system | 8.29e-11 | 81 |
trunk region element | 1.02e-10 | 101 |
cell layer | 4.74e-10 | 309 |
epithelium | 1.49e-09 | 306 |
brain | 5.59e-09 | 68 |
future brain | 5.59e-09 | 68 |
tube | 1.47e-08 | 192 |
anatomical conduit | 1.54e-08 | 240 |
cavitated compound organ | 2.03e-08 | 31 |
neural plate | 2.30e-08 | 82 |
presumptive neural plate | 2.30e-08 | 82 |
embryo | 1.09e-07 | 592 |
structure with developmental contribution from neural crest | 2.97e-07 | 132 |
neural tube | 4.56e-07 | 56 |
neural rod | 4.56e-07 | 56 |
future spinal cord | 4.56e-07 | 56 |
neural keel | 4.56e-07 | 56 |
kidney | 4.93e-07 | 26 |
kidney mesenchyme | 4.93e-07 | 26 |
upper urinary tract | 4.93e-07 | 26 |
kidney rudiment | 4.93e-07 | 26 |
kidney field | 4.93e-07 | 26 |
neurectoderm | 4.98e-07 | 86 |
abdomen element | 7.19e-07 | 54 |
abdominal segment element | 7.19e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.42e-14 | 143 |
carcinoma | 1.83e-12 | 106 |
cancer | 8.25e-07 | 235 |
disease of cellular proliferation | 8.74e-07 | 239 |
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