FFCP PHASE1:Hg19::chr15:40294703..40294711,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=440275|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19687|TSSclassifier=W|UniProt=|association_with_transcript=111bp_to_ENST00000558557,ENST00000559311_5end|coexpression_cluster_id=C55|description=CAGE_peak_12_at_EIF2AK4_5end|id=chr15:40294703..40294711,+|ontology_enrichment_celltype=CL:0000181!1.45e-19!12;CL:0000417!1.45e-19!12;CL:0000668!1.45e-19!12;CL:0000414!1.45e-19!12;CL:0000412!1.45e-19!12;CL:0000182!1.45e-19!12;CL:0002535!1.73e-08!2;CL:0002253!2.48e-08!2|ontology_enrichment_celltype_v019=CL:0000182;9.17e-38;12|ontology_enrichment_celltype_v019_2=CL:0000182,8.61e-38,12;CL:0000223,1.35e-08,58|ontology_enrichment_development_v019=UBERON:0004161;6.65e-72;11!UBERON:0009497;4.89e-61;13!UBERON:0001041;4.24e-27;30!UBERON:0003104;5.84e-26;31!UBERON:0006595;9.29e-08;86|ontology_enrichment_disease=DOID:7!2.97e-09!39;DOID:3493!2.67e-08!2;DOID:305!6.43e-08!106|ontology_enrichment_disease_v019=DOID:7;7.70e-13;39|ontology_enrichment_disease_v019_2=DOID:7,2.38e-12,39|ontology_enrichment_uberon=UBERON:0009497!1.77e-20!25;UBERON:0000015!1.77e-20!25;UBERON:0002423!1.77e-20!25;UBERON:0006235!1.77e-20!25;UBERON:0004161!1.77e-20!25;UBERON:0002107!5.21e-19!19;UBERON:0006925!5.21e-19!19;UBERON:0008836!5.21e-19!19;UBERON:0008835!2.00e-16!22;UBERON:0003894!2.00e-16!22;UBERON:0003929!2.91e-16!54;UBERON:0009854!1.03e-15!23;UBERON:0007499!1.85e-14!25;UBERON:0005057!6.65e-14!26;UBERON:0009856!6.65e-14!26;UBERON:0005172!2.42e-12!55;UBERON:0005173!2.42e-12!55;UBERON:0002365!1.16e-11!31;UBERON:0002330!1.16e-11!31;UBERON:0002417!4.45e-11!61;UBERON:0000916!4.45e-11!61;UBERON:0005911!1.80e-10!82;UBERON:0002368!2.52e-10!35;UBERON:0002530!1.65e-08!59;UBERON:0006955!1.73e-08!2;UBERON:0004801!1.73e-08!2;UBERON:0000949!5.11e-08!45|ontology_enrichment_uberon_v019=UBERON:0002107;3.83e-42;19!UBERON:0006925;3.83e-42;19!UBERON:0002423;2.66e-32;25!UBERON:0002365;7.99e-25;31!UBERON:0002330;7.99e-25;31!UBERON:0002368;1.76e-19;33!UBERON:0000949;1.01e-16;43!UBERON:0005172;4.12e-09;52!UBERON:0005173;4.12e-09;52!UBERON:0002530;2.64e-08;57!UBERON:0002417;1.77e-07;58!UBERON:0000916;1.77e-07;58|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.83e-42,19;UBERON:0006925,3.83e-42,19;UBERON:0008836,3.83e-42,19;UBERON:0008835,1.49e-36,22;UBERON:0003894,1.49e-36,22;UBERON:0009854,5.16e-35,23;UBERON:0007499,2.66e-32,25;UBERON:0009497,2.66e-32,25;UBERON:0000015,2.66e-32,25;UBERON:0002423,2.66e-32,25;UBERON:0006235,2.66e-32,25;UBERON:0004161,2.66e-32,25;UBERON:0009856,4.21e-31,26;UBERON:0002365,2.93e-26,31;UBERON:0002330,2.93e-26,31;UBERON:0002368,2.23e-23,35;UBERON:0000949,2.09e-18,45;UBERON:0003929,1.70e-15,54;UBERON:0005172,1.70e-15,54;UBERON:0005173,1.70e-15,54;UBERON:0002530,2.92e-14,59;UBERON:0002417,4.87e-14,60;UBERON:0000916,4.87e-14,60;UBERON:0005911,1.66e-10,82;UBERON:0001041,5.98e-10,87;UBERON:0005177,1.11e-08,101;UBERON:0009569,6.64e-08,112;UBERON:0003914,1.34e-07,117;UBERON:0004921,1.75e-07,118;UBERON:0005256,2.56e-07,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89079637537337,2.30764403467266,3.1005630172925,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31897010310274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p12@EIF2AK4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=440275 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19687 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=111bp_to_ENST00000558557,ENST00000559311_5end | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_12_at_EIF2AK4_5end | |||
|id=chr15:40294703..40294711,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.45e-19!12;CL:0000417!1.45e-19!12;CL:0000668!1.45e-19!12;CL:0000414!1.45e-19!12;CL:0000412!1.45e-19!12;CL:0000182!1.45e-19!12;CL:0002535!1.73e-08!2;CL:0002253!2.48e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;9.17e-38;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.61e-38,12;CL:0000223,1.35e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.65e-72;11!UBERON:0009497;4.89e-61;13!UBERON:0001041;4.24e-27;30!UBERON:0003104;5.84e-26;31!UBERON:0006595;9.29e-08;86 | |||
|ontology_enrichment_disease=DOID:7!2.97e-09!39;DOID:3493!2.67e-08!2;DOID:305!6.43e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:7;7.70e-13;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.38e-12,39 | |||
|ontology_enrichment_uberon=UBERON:0009497!1.77e-20!25;UBERON:0000015!1.77e-20!25;UBERON:0002423!1.77e-20!25;UBERON:0006235!1.77e-20!25;UBERON:0004161!1.77e-20!25;UBERON:0002107!5.21e-19!19;UBERON:0006925!5.21e-19!19;UBERON:0008836!5.21e-19!19;UBERON:0008835!2.00e-16!22;UBERON:0003894!2.00e-16!22;UBERON:0003929!2.91e-16!54;UBERON:0009854!1.03e-15!23;UBERON:0007499!1.85e-14!25;UBERON:0005057!6.65e-14!26;UBERON:0009856!6.65e-14!26;UBERON:0005172!2.42e-12!55;UBERON:0005173!2.42e-12!55;UBERON:0002365!1.16e-11!31;UBERON:0002330!1.16e-11!31;UBERON:0002417!4.45e-11!61;UBERON:0000916!4.45e-11!61;UBERON:0005911!1.80e-10!82;UBERON:0002368!2.52e-10!35;UBERON:0002530!1.65e-08!59;UBERON:0006955!1.73e-08!2;UBERON:0004801!1.73e-08!2;UBERON:0000949!5.11e-08!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.83e-42;19!UBERON:0006925;3.83e-42;19!UBERON:0002423;2.66e-32;25!UBERON:0002365;7.99e-25;31!UBERON:0002330;7.99e-25;31!UBERON:0002368;1.76e-19;33!UBERON:0000949;1.01e-16;43!UBERON:0005172;4.12e-09;52!UBERON:0005173;4.12e-09;52!UBERON:0002530;2.64e-08;57!UBERON:0002417;1.77e-07;58!UBERON:0000916;1.77e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.83e-42,19;UBERON:0006925,3.83e-42,19;UBERON:0008836,3.83e-42,19;UBERON:0008835,1.49e-36,22;UBERON:0003894,1.49e-36,22;UBERON:0009854,5.16e-35,23;UBERON:0007499,2.66e-32,25;UBERON:0009497,2.66e-32,25;UBERON:0000015,2.66e-32,25;UBERON:0002423,2.66e-32,25;UBERON:0006235,2.66e-32,25;UBERON:0004161,2.66e-32,25;UBERON:0009856,4.21e-31,26;UBERON:0002365,2.93e-26,31;UBERON:0002330,2.93e-26,31;UBERON:0002368,2.23e-23,35;UBERON:0000949,2.09e-18,45;UBERON:0003929,1.70e-15,54;UBERON:0005172,1.70e-15,54;UBERON:0005173,1.70e-15,54;UBERON:0002530,2.92e-14,59;UBERON:0002417,4.87e-14,60;UBERON:0000916,4.87e-14,60;UBERON:0005911,1.66e-10,82;UBERON:0001041,5.98e-10,87;UBERON:0005177,1.11e-08,101;UBERON:0009569,6.64e-08,112;UBERON:0003914,1.34e-07,117;UBERON:0004921,1.75e-07,118;UBERON:0005256,2.56e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89079637537337,2.30764403467266,3.1005630172925,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31897010310274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@EIF2AK4 | |||
}} |
Revision as of 06:53, 11 September 2013
Short description: | p12@EIF2AK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_EIF2AK4_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | 111bp_to_ENST00000558557, ENST00000559311_5end |
EntrezGene: | EIF2AK4 |
HGNC: | 19687 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.61e-38 | 12 |
endodermal cell | 1.35e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.83e-42 | 19 |
digestive gland | 3.83e-42 | 19 |
liver bud | 3.83e-42 | 19 |
hepatic diverticulum | 1.49e-36 | 22 |
liver primordium | 1.49e-36 | 22 |
digestive tract diverticulum | 5.16e-35 | 23 |
epithelial sac | 2.66e-32 | 25 |
epithelium of foregut-midgut junction | 2.66e-32 | 25 |
anatomical boundary | 2.66e-32 | 25 |
hepatobiliary system | 2.66e-32 | 25 |
foregut-midgut junction | 2.66e-32 | 25 |
septum transversum | 2.66e-32 | 25 |
sac | 4.21e-31 | 26 |
exocrine gland | 2.93e-26 | 31 |
exocrine system | 2.93e-26 | 31 |
endocrine gland | 2.23e-23 | 35 |
endocrine system | 2.09e-18 | 45 |
gut epithelium | 1.70e-15 | 54 |
abdomen element | 1.70e-15 | 54 |
abdominal segment element | 1.70e-15 | 54 |
gland | 2.92e-14 | 59 |
abdominal segment of trunk | 4.87e-14 | 60 |
abdomen | 4.87e-14 | 60 |
endo-epithelium | 1.66e-10 | 82 |
foregut | 5.98e-10 | 87 |
trunk region element | 1.11e-08 | 101 |
subdivision of trunk | 6.64e-08 | 112 |
epithelial tube | 1.34e-07 | 117 |
subdivision of digestive tract | 1.75e-07 | 118 |
trunk mesenchyme | 2.56e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.38e-12 | 39 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.