FFCP PHASE1:Hg19::chr14:105499175..105499201,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:105499175..105499201,+|id=chr14:105499175..105499201,+|ontology_enrichment_celltype=CL:0000066!2.22e-08!254;CL:0000244!8.55e-08!4;CL:0000731!8.55e-08!4;CL:0002076!1.22e-07!43|ontology_enrichment_celltype_v019=CL:0000244;6.41e-19;4!CL:0000731;6.41e-19;4!CL:0002541;1.05e-14;3!CL:0000064;4.39e-14;3!CL:0000067;4.39e-14;3!CL:0005012;4.39e-14;3!CL:0002304;4.39e-14;3!CL:1000415;2.10e-10;2!CL:0000349;3.61e-08;19!CL:0000322;3.08e-07;3|ontology_enrichment_celltype_v019_2=CL:0000244,3.60e-19,4;CL:0000731,3.60e-19,4;CL:0002541,1.53e-14,3;CL:0000064,6.04e-14,3;CL:0000067,6.04e-14,3;CL:0005012,6.04e-14,3;CL:0002304,6.04e-14,3;CL:1000415,2.79e-10,2;CL:0000066,8.98e-09,253;CL:0000349,4.00e-08,19;CL:0000322,2.44e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.92e-12!14;UBERON:0000158!1.92e-12!14;UBERON:0006554!1.07e-10!44;UBERON:0001008!2.53e-10!45;UBERON:0005156!1.74e-09!59;UBERON:0000990!1.74e-09!59;UBERON:0000365!5.69e-09!5;UBERON:0003124!2.67e-08!7;UBERON:0003133!6.00e-08!48;UBERON:0000488!1.76e-07!4;UBERON:0005910!2.37e-07!6|ontology_enrichment_uberon_v019=UBERON:0000488;2.27e-18;4!UBERON:0005631;4.58e-16;10!UBERON:0000158;4.58e-16;10!UBERON:0000365;3.64e-15;5!UBERON:0003124;1.05e-14;3!UBERON:0000920;1.05e-14;3!UBERON:0001778;4.39e-14;3!UBERON:0001775;4.39e-14;3!UBERON:0005910;1.17e-12;6!UBERON:0002203;2.68e-12;6!UBERON:0001768;2.68e-12;6!UBERON:0002200;2.68e-12;6!UBERON:0002294;5.64e-11;7!UBERON:0001173;5.64e-11;7!UBERON:0004821;3.08e-07;3!UBERON:0007499;3.08e-07;3!UBERON:0003215;3.08e-07;3!UBERON:0010368;3.08e-07;3!UBERON:0009911;3.08e-07;3!UBERON:0002299;3.08e-07;3!UBERON:0006524;3.08e-07;3!UBERON:0008874;3.08e-07;3!UBERON:0002169;3.08e-07;3!UBERON:0004894;3.08e-07;3!UBERON:0002110;3.33e-07;3!UBERON:0007625;9.61e-07;11!UBERON:0006876;9.61e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0000488,2.73e-18,4;UBERON:0000365,2.30e-15,5;UBERON:0000920,1.53e-14,3;UBERON:0001778,6.04e-14,3;UBERON:0001775,6.04e-14,3;UBERON:0005910,8.02e-13,6;UBERON:0002203,3.03e-12,6;UBERON:0001768,3.03e-12,6;UBERON:0002200,3.03e-12,6;UBERON:0005631,3.04e-11,14;UBERON:0000158,3.04e-11,14;UBERON:0002294,1.65e-08,9;UBERON:0001173,1.65e-08,9;UBERON:0004912,1.65e-08,9;UBERON:0005911,3.01e-08,82;UBERON:0004821,2.44e-07,3;UBERON:0003215,2.44e-07,3;UBERON:0010368,2.44e-07,3;UBERON:0009911,2.44e-07,3;UBERON:0002299,2.44e-07,3;UBERON:0006524,2.44e-07,3;UBERON:0008874,2.44e-07,3;UBERON:0002169,2.44e-07,3;UBERON:0004894,2.44e-07,3;UBERON:0002110,4.01e-07,3;UBERON:0006242,4.01e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,0,0.655324116390517,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41802225746102,2.21729397462564,1.40535657109002,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91665277507493,0.548751427043128,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0.148631162288728,0.93733833986777,0.503946384596579,1.27597587518148,0,0,0,0.985326475791887,1.58487181223807,0,0.288239906833923,3.1560608356595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,4.81215528727884,0.184161977871793,0,0,0,0,1.46329140498388,0,0,2.11103257785751,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0.457847324091717,0.990113999047056,1.14853107599234,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.661139661443912,1.15314040419064,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.288666338176536,0,0,0,5.16606447205476,1.68471475667626,1.7737206141467,6.66197860600182,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,3.10367830158997,1.48482340416319,0.614321404198464,0,0,3.22795244566427,0,0,0.19924798825107,0,0,0.613612095012929,0,0,3.23526064130377,0,0,0.0986434056369336,0,0,0,0,0,0.7812832832557,0,0,0,14.2382044163949,0.709163045303809,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:105499175..105499201,+ | |||
|id=chr14:105499175..105499201,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.22e-08!254;CL:0000244!8.55e-08!4;CL:0000731!8.55e-08!4;CL:0002076!1.22e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000244;6.41e-19;4!CL:0000731;6.41e-19;4!CL:0002541;1.05e-14;3!CL:0000064;4.39e-14;3!CL:0000067;4.39e-14;3!CL:0005012;4.39e-14;3!CL:0002304;4.39e-14;3!CL:1000415;2.10e-10;2!CL:0000349;3.61e-08;19!CL:0000322;3.08e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,3.60e-19,4;CL:0000731,3.60e-19,4;CL:0002541,1.53e-14,3;CL:0000064,6.04e-14,3;CL:0000067,6.04e-14,3;CL:0005012,6.04e-14,3;CL:0002304,6.04e-14,3;CL:1000415,2.79e-10,2;CL:0000066,8.98e-09,253;CL:0000349,4.00e-08,19;CL:0000322,2.44e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.92e-12!14;UBERON:0000158!1.92e-12!14;UBERON:0006554!1.07e-10!44;UBERON:0001008!2.53e-10!45;UBERON:0005156!1.74e-09!59;UBERON:0000990!1.74e-09!59;UBERON:0000365!5.69e-09!5;UBERON:0003124!2.67e-08!7;UBERON:0003133!6.00e-08!48;UBERON:0000488!1.76e-07!4;UBERON:0005910!2.37e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;2.27e-18;4!UBERON:0005631;4.58e-16;10!UBERON:0000158;4.58e-16;10!UBERON:0000365;3.64e-15;5!UBERON:0003124;1.05e-14;3!UBERON:0000920;1.05e-14;3!UBERON:0001778;4.39e-14;3!UBERON:0001775;4.39e-14;3!UBERON:0005910;1.17e-12;6!UBERON:0002203;2.68e-12;6!UBERON:0001768;2.68e-12;6!UBERON:0002200;2.68e-12;6!UBERON:0002294;5.64e-11;7!UBERON:0001173;5.64e-11;7!UBERON:0004821;3.08e-07;3!UBERON:0007499;3.08e-07;3!UBERON:0003215;3.08e-07;3!UBERON:0010368;3.08e-07;3!UBERON:0009911;3.08e-07;3!UBERON:0002299;3.08e-07;3!UBERON:0006524;3.08e-07;3!UBERON:0008874;3.08e-07;3!UBERON:0002169;3.08e-07;3!UBERON:0004894;3.08e-07;3!UBERON:0002110;3.33e-07;3!UBERON:0007625;9.61e-07;11!UBERON:0006876;9.61e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,2.73e-18,4;UBERON:0000365,2.30e-15,5;UBERON:0000920,1.53e-14,3;UBERON:0001778,6.04e-14,3;UBERON:0001775,6.04e-14,3;UBERON:0005910,8.02e-13,6;UBERON:0002203,3.03e-12,6;UBERON:0001768,3.03e-12,6;UBERON:0002200,3.03e-12,6;UBERON:0005631,3.04e-11,14;UBERON:0000158,3.04e-11,14;UBERON:0002294,1.65e-08,9;UBERON:0001173,1.65e-08,9;UBERON:0004912,1.65e-08,9;UBERON:0005911,3.01e-08,82;UBERON:0004821,2.44e-07,3;UBERON:0003215,2.44e-07,3;UBERON:0010368,2.44e-07,3;UBERON:0009911,2.44e-07,3;UBERON:0002299,2.44e-07,3;UBERON:0006524,2.44e-07,3;UBERON:0008874,2.44e-07,3;UBERON:0002169,2.44e-07,3;UBERON:0004894,2.44e-07,3;UBERON:0002110,4.01e-07,3;UBERON:0006242,4.01e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.72013755551056,0,0.655324116390517,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41802225746102,2.21729397462564,1.40535657109002,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91665277507493,0.548751427043128,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0.148631162288728,0.93733833986777,0.503946384596579,1.27597587518148,0,0,0,0.985326475791887,1.58487181223807,0,0.288239906833923,3.1560608356595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,4.81215528727884,0.184161977871793,0,0,0,0,1.46329140498388,0,0,2.11103257785751,0,0,0,0,0.270946437543853,0,0.509752546090077,0,0.223874754722178,0,0,0,0.328014645699706,0,0.103041011647722,0.457847324091717,0.990113999047056,1.14853107599234,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.661139661443912,1.15314040419064,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.288666338176536,0,0,0,5.16606447205476,1.68471475667626,1.7737206141467,6.66197860600182,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,3.10367830158997,1.48482340416319,0.614321404198464,0,0,3.22795244566427,0,0,0.19924798825107,0,0,0.613612095012929,0,0,3.23526064130377,0,0,0.0986434056369336,0,0,0,0,0,0.7812832832557,0,0,0,14.2382044163949,0.709163045303809,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.923403102045565,0.227884111694002,0,0.0897576444097721,0,8.93203247249374,1.28236630762607,2.13213910407454,0,0,0.166211681900156,0,0,0,0,0.794682894901893,0,1.79556088975062,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0,2.25382514053069,0,0.873633341210151,13.2429245003145,0,0,0,0,0,0,7.12618008163105,0.19871461170299,0.0633107959558787,1.36885967914362,8.01588202515337,0,0,0,0,0,0,5.09435395818273,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41661368190565,0,0.335434687599266,1.49730843868477,0.891727998294968,5.17441648945092,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0.704815022316672,0.213574825135389,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.758245587708239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.931577741257556,0,0.265841714557995,1.5652351854352,0,0,0,0.181848659202559,1.71856891267982,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0.577628330751691,0,1.3807198521202,0,0.0752103283492573,0.20170506870352,0,0,0,2.21784129325568,0,0,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.887023701626388,0,0.171488009437418,0,0,0.472775363535873,0.111231401892069,0,0,0.560544326627578,0,0.431855182437243,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0.170426809518315,0.423387050190929,2.52017555398455,3.1020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407955318967927,0,0,0,0.151557396436479,0.267964130156178,0,0,0.426467963801962,0.23806443146374,0,0.0620747142958579,3.92461519032147,0,0,0,0,0,0.430333232356058,0.332660356546013,0.569822880276821,0,0,0,0,0.244482888365733,0.813792356631477,0,0,0 | |||
|short_description=p@chr14:105499175..105499201,+ | |||
}} |
Revision as of 03:29, 11 September 2013
Short description: | p@chr14:105499175..105499201, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:105499175..105499201, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 3.60e-19 | 4 |
urothelial cell | 3.60e-19 | 4 |
chorionic membrane mesenchymal stem cell | 1.53e-14 | 3 |
ciliated cell | 6.04e-14 | 3 |
ciliated epithelial cell | 6.04e-14 | 3 |
multi-ciliated epithelial cell | 6.04e-14 | 3 |
non-pigmented ciliary epithelial cell | 6.04e-14 | 3 |
epithelial cell of gall bladder | 2.79e-10 | 2 |
epithelial cell | 8.98e-09 | 253 |
extraembryonic cell | 4.00e-08 | 19 |
pneumocyte | 2.44e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 2.73e-18 | 4 |
urothelium | 2.30e-15 | 5 |
egg chorion | 1.53e-14 | 3 |
ciliary epithelium | 6.04e-14 | 3 |
ciliary body | 6.04e-14 | 3 |
transitional epithelium | 8.02e-13 | 6 |
vasculature of eye | 3.03e-12 | 6 |
uvea | 3.03e-12 | 6 |
vasculature of head | 3.03e-12 | 6 |
extraembryonic membrane | 3.04e-11 | 14 |
membranous layer | 3.04e-11 | 14 |
biliary system | 1.65e-08 | 9 |
biliary tree | 1.65e-08 | 9 |
biliary bud | 1.65e-08 | 9 |
endo-epithelium | 3.01e-08 | 82 |
pulmonary alveolus epithelium | 2.44e-07 | 3 |
alveolus | 2.44e-07 | 3 |
pulmonary lobule | 2.44e-07 | 3 |
lobule | 2.44e-07 | 3 |
alveolus of lung | 2.44e-07 | 3 |
alveolar system | 2.44e-07 | 3 |
pulmonary acinus | 2.44e-07 | 3 |
alveolar sac | 2.44e-07 | 3 |
alveolar wall | 2.44e-07 | 3 |
gallbladder | 4.01e-07 | 3 |
gall bladder primordium | 4.01e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.