FFCP PHASE1:Hg19::chr14:61748147..61748187,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=161291|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27254|TSSclassifier=S|UniProt=|association_with_transcript=6bp_to_ENST00000557163,uc010apr.1_5end|coexpression_cluster_id=C2305|description=CAGE_peak_4_at_TMEM30B_5end|id=chr14:61748147..61748187,-|ontology_enrichment_celltype=CL:0000066!8.14e-19!254;CL:0002076!5.85e-17!43;CL:0000223!3.71e-13!59;CL:0002251!5.45e-08!21;CL:0002368!1.20e-07!13|ontology_enrichment_celltype_v019=CL:0002076;6.99e-17;42!CL:0002251;3.68e-12;20!CL:0002368;4.94e-07;13|ontology_enrichment_celltype_v019_2=CL:0002076,1.31e-20,42;CL:0000066,8.42e-19,253;CL:0000223,6.18e-15,58;CL:0002251,4.90e-12,20;CL:0002368,4.08e-07,13|ontology_enrichment_development_v019=CL:0000223;1.96e-08;58!UBERON:0006595;3.53e-08;86|ontology_enrichment_disease=DOID:305!2.21e-14!106;DOID:1749!1.05e-12!14;DOID:0050687!1.55e-09!143;DOID:299!1.44e-08!25|ontology_enrichment_disease_v019=DOID:1749;3.72e-11;14!DOID:299;1.26e-09;25!DOID:5093;1.91e-07;4!DOID:1612;1.91e-07;4|ontology_enrichment_disease_v019_2=DOID:305,1.92e-14,106;DOID:1749,3.91e-11,14;DOID:0050687,2.04e-10,143;DOID:299,8.60e-10,25;DOID:5093,1.47e-07,4;DOID:1612,1.47e-07,4|ontology_enrichment_uberon=UBERON:0004119!8.58e-24!169;UBERON:0000925!8.58e-24!169;UBERON:0006595!8.58e-24!169;UBERON:0001007!2.11e-18!155;UBERON:0001555!2.11e-18!155;UBERON:0007026!2.11e-18!155;UBERON:0004921!2.41e-15!129;UBERON:0004185!2.41e-15!129;UBERON:0005911!1.82e-14!82;UBERON:0000077!7.21e-14!130;UBERON:0001004!6.88e-12!72;UBERON:0000466!2.98e-11!126;UBERON:0000464!3.40e-10!104;UBERON:0005153!1.56e-09!37;UBERON:0000161!2.09e-09!35;UBERON:0005156!2.27e-09!59;UBERON:0000990!2.27e-09!59;UBERON:0005631!5.55e-09!14;UBERON:0000158!5.55e-09!14;UBERON:0000065!8.82e-09!53;UBERON:0000344!1.99e-08!12;UBERON:0001041!3.11e-08!98;UBERON:0005178!3.14e-08!34;UBERON:0002224!3.14e-08!34;UBERON:0004175!5.25e-08!25;UBERON:0005181!7.97e-08!35;UBERON:0003929!8.09e-08!54;UBERON:0000915!8.63e-08!52;UBERON:0005157!9.92e-08!51;UBERON:0003133!1.41e-07!48;UBERON:0000974!1.69e-07!10;UBERON:0009569!5.33e-07!113;UBERON:0003124!6.88e-07!7;UBERON:0003101!7.98e-07!22;UBERON:0000079!7.98e-07!22;UBERON:0002530!9.40e-07!59|ontology_enrichment_uberon_v019=UBERON:0000344;7.75e-10;20!UBERON:0000974;1.76e-09;6!UBERON:0004921;2.01e-09;33!UBERON:0005911;7.53e-09;36!UBERON:0004807;2.20e-08;22!UBERON:0000058;5.46e-08;10!UBERON:0000161;9.02e-08;19!UBERON:0000166;9.02e-08;19!UBERON:0005409;1.17e-07;22!UBERON:0000160;3.49e-07;17!UBERON:0001555;3.77e-07;54!UBERON:0003343;7.69e-07;4!UBERON:0004785;7.69e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.82e-24,160;UBERON:0000925,1.82e-24,160;UBERON:0006595,1.82e-24,160;UBERON:0001007,1.19e-18,145;UBERON:0001555,1.19e-18,145;UBERON:0007026,1.19e-18,145;UBERON:0004921,1.14e-14,118;UBERON:0005911,1.49e-13,82;UBERON:0005631,2.47e-10,14;UBERON:0000158,2.47e-10,14;UBERON:0001004,2.52e-10,74;UBERON:0000344,8.19e-10,20;UBERON:0005156,1.15e-09,59;UBERON:0000990,1.15e-09,59;UBERON:0000161,3.35e-09,36;UBERON:0004175,5.42e-09,25;UBERON:0005153,9.64e-09,37;UBERON:0001008,5.52e-08,48;UBERON:0003133,1.11e-07,48;UBERON:0005157,1.44e-07,47;UBERON:0006554,2.01e-07,47;UBERON:0000915,2.54e-07,52;UBERON:0001041,3.64e-07,87;UBERON:0000160,3.67e-07,17;UBERON:0005178,5.06e-07,34;UBERON:0002224,5.06e-07,34;UBERON:0003929,5.70e-07,54;UBERON:0003124,6.88e-07,7;UBERON:0000974,8.71e-07,10;UBERON:0003343,9.08e-07,4;UBERON:0004785,9.08e-07,4;UBERON:0004807,9.73e-07,28|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,1.96587149201207,3.48900583986214,2.40285509343189,2.63766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50602959389125,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.411202997999018,0,1.30368906653436,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0.802622484269139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0.785874452986276,1.82147644146271,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48875241714027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,3.00020732649918,1.14721838155602,3.04934265323988,1.45782745153634,1.51052125730374,1.34759371519982,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,5.28850285735388,0,0.878002283269004,0,1.50793458617446,2.59247646443883,0,0,0,0,0,0,0,0,3.95102198979638,4.29243081047436,0,0,0,0,1.17587489739202,0.708875486211932,2.32852159027406,0.581267877027924,0,0,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.647142602455851,0.106727557803444,1.21251028578504,1.66435439510497,1.51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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=161291 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27254 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=6bp_to_ENST00000557163,uc010apr.1_5end | |||
|coexpression_cluster_id=C2305 | |||
|description=CAGE_peak_4_at_TMEM30B_5end | |||
|id=chr14:61748147..61748187,- | |||
|ontology_enrichment_celltype=CL:0000066!8.14e-19!254;CL:0002076!5.85e-17!43;CL:0000223!3.71e-13!59;CL:0002251!5.45e-08!21;CL:0002368!1.20e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;6.99e-17;42!CL:0002251;3.68e-12;20!CL:0002368;4.94e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.31e-20,42;CL:0000066,8.42e-19,253;CL:0000223,6.18e-15,58;CL:0002251,4.90e-12,20;CL:0002368,4.08e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000223;1.96e-08;58!UBERON:0006595;3.53e-08;86 | |||
|ontology_enrichment_disease=DOID:305!2.21e-14!106;DOID:1749!1.05e-12!14;DOID:0050687!1.55e-09!143;DOID:299!1.44e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.72e-11;14!DOID:299;1.26e-09;25!DOID:5093;1.91e-07;4!DOID:1612;1.91e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.92e-14,106;DOID:1749,3.91e-11,14;DOID:0050687,2.04e-10,143;DOID:299,8.60e-10,25;DOID:5093,1.47e-07,4;DOID:1612,1.47e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.58e-24!169;UBERON:0000925!8.58e-24!169;UBERON:0006595!8.58e-24!169;UBERON:0001007!2.11e-18!155;UBERON:0001555!2.11e-18!155;UBERON:0007026!2.11e-18!155;UBERON:0004921!2.41e-15!129;UBERON:0004185!2.41e-15!129;UBERON:0005911!1.82e-14!82;UBERON:0000077!7.21e-14!130;UBERON:0001004!6.88e-12!72;UBERON:0000466!2.98e-11!126;UBERON:0000464!3.40e-10!104;UBERON:0005153!1.56e-09!37;UBERON:0000161!2.09e-09!35;UBERON:0005156!2.27e-09!59;UBERON:0000990!2.27e-09!59;UBERON:0005631!5.55e-09!14;UBERON:0000158!5.55e-09!14;UBERON:0000065!8.82e-09!53;UBERON:0000344!1.99e-08!12;UBERON:0001041!3.11e-08!98;UBERON:0005178!3.14e-08!34;UBERON:0002224!3.14e-08!34;UBERON:0004175!5.25e-08!25;UBERON:0005181!7.97e-08!35;UBERON:0003929!8.09e-08!54;UBERON:0000915!8.63e-08!52;UBERON:0005157!9.92e-08!51;UBERON:0003133!1.41e-07!48;UBERON:0000974!1.69e-07!10;UBERON:0009569!5.33e-07!113;UBERON:0003124!6.88e-07!7;UBERON:0003101!7.98e-07!22;UBERON:0000079!7.98e-07!22;UBERON:0002530!9.40e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000344;7.75e-10;20!UBERON:0000974;1.76e-09;6!UBERON:0004921;2.01e-09;33!UBERON:0005911;7.53e-09;36!UBERON:0004807;2.20e-08;22!UBERON:0000058;5.46e-08;10!UBERON:0000161;9.02e-08;19!UBERON:0000166;9.02e-08;19!UBERON:0005409;1.17e-07;22!UBERON:0000160;3.49e-07;17!UBERON:0001555;3.77e-07;54!UBERON:0003343;7.69e-07;4!UBERON:0004785;7.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.82e-24,160;UBERON:0000925,1.82e-24,160;UBERON:0006595,1.82e-24,160;UBERON:0001007,1.19e-18,145;UBERON:0001555,1.19e-18,145;UBERON:0007026,1.19e-18,145;UBERON:0004921,1.14e-14,118;UBERON:0005911,1.49e-13,82;UBERON:0005631,2.47e-10,14;UBERON:0000158,2.47e-10,14;UBERON:0001004,2.52e-10,74;UBERON:0000344,8.19e-10,20;UBERON:0005156,1.15e-09,59;UBERON:0000990,1.15e-09,59;UBERON:0000161,3.35e-09,36;UBERON:0004175,5.42e-09,25;UBERON:0005153,9.64e-09,37;UBERON:0001008,5.52e-08,48;UBERON:0003133,1.11e-07,48;UBERON:0005157,1.44e-07,47;UBERON:0006554,2.01e-07,47;UBERON:0000915,2.54e-07,52;UBERON:0001041,3.64e-07,87;UBERON:0000160,3.67e-07,17;UBERON:0005178,5.06e-07,34;UBERON:0002224,5.06e-07,34;UBERON:0003929,5.70e-07,54;UBERON:0003124,6.88e-07,7;UBERON:0000974,8.71e-07,10;UBERON:0003343,9.08e-07,4;UBERON:0004785,9.08e-07,4;UBERON:0004807,9.73e-07,28 | |||
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|short_description=p4@TMEM30B | |||
}} |
Revision as of 05:00, 11 September 2013
Short description: | p4@TMEM30B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TMEM30B_5end |
Coexpression cluster: | C2305_thyroid_pituitary_small_parotid_choriocarcinoma_salivary_bile |
Association with transcript: | 6bp_to_ENST00000557163, uc010apr.1_5end |
EntrezGene: | TMEM30B |
HGNC: | 27254 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.31e-20 | 42 |
epithelial cell | 8.42e-19 | 253 |
endodermal cell | 6.18e-15 | 58 |
epithelial cell of alimentary canal | 4.90e-12 | 20 |
respiratory epithelial cell | 4.08e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.82e-24 | 160 |
endoderm | 1.82e-24 | 160 |
presumptive endoderm | 1.82e-24 | 160 |
digestive system | 1.19e-18 | 145 |
digestive tract | 1.19e-18 | 145 |
primitive gut | 1.19e-18 | 145 |
subdivision of digestive tract | 1.14e-14 | 118 |
endo-epithelium | 1.49e-13 | 82 |
extraembryonic membrane | 2.47e-10 | 14 |
membranous layer | 2.47e-10 | 14 |
respiratory system | 2.52e-10 | 74 |
mucosa | 8.19e-10 | 20 |
reproductive structure | 1.15e-09 | 59 |
reproductive system | 1.15e-09 | 59 |
orifice | 3.35e-09 | 36 |
internal genitalia | 5.42e-09 | 25 |
epithelial bud | 9.64e-09 | 37 |
renal system | 5.52e-08 | 48 |
reproductive organ | 1.11e-07 | 48 |
epithelial fold | 1.44e-07 | 47 |
urinary system structure | 2.01e-07 | 47 |
thoracic segment of trunk | 2.54e-07 | 52 |
foregut | 3.64e-07 | 87 |
intestine | 3.67e-07 | 17 |
thoracic cavity element | 5.06e-07 | 34 |
thoracic cavity | 5.06e-07 | 34 |
gut epithelium | 5.70e-07 | 54 |
chorion | 6.88e-07 | 7 |
neck | 8.71e-07 | 10 |
mucosa of oral region | 9.08e-07 | 4 |
respiratory system mucosa | 9.08e-07 | 4 |
respiratory system epithelium | 9.73e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.92e-14 | 106 |
squamous cell carcinoma | 3.91e-11 | 14 |
cell type cancer | 2.04e-10 | 143 |
adenocarcinoma | 8.60e-10 | 25 |
thoracic cancer | 1.47e-07 | 4 |
breast cancer | 1.47e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.