FFCP PHASE1:Hg19::chr14:39735809..39735832,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4253|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7057|TSSclassifier=S|UniProt=|association_with_transcript=-45bp_to_uc001wve.1_5end|description=CAGE_peak_8_at_CTAGE5_5end|id=chr14:39735809..39735832,+|ontology_enrichment_celltype=CL:0000066!3.23e-18!254;CL:0000223!1.11e-14!59;CL:0002076!5.62e-11!43|ontology_enrichment_celltype_v019=CL:0002076;4.76e-13;42!CL:0002166;1.80e-11;3!CL:0002231;4.10e-11;3!CL:0000182;5.66e-11;12|ontology_enrichment_celltype_v019_2=CL:0000223,9.23e-23,58;CL:0002076,8.12e-14,42;CL:0002166,2.25e-11,3;CL:0002231,4.59e-11,3;CL:0000182,5.91e-11,12;CL:0000066,2.05e-09,253|ontology_enrichment_development_v019=UBERON:0009497;6.06e-22;13!UBERON:0004161;6.25e-16;11!CL:0000223;2.15e-13;58!UBERON:0001041;1.15e-10;30!UBERON:0003104;2.81e-08;31|ontology_enrichment_disease=DOID:305!1.76e-21!106;DOID:0050687!1.05e-16!143;DOID:14566!8.59e-12!239;DOID:162!1.89e-11!235;DOID:299!2.16e-08!25|ontology_enrichment_disease_v019=DOID:299;2.32e-10;25!DOID:3493;1.06e-08;2|ontology_enrichment_disease_v019_2=DOID:299,1.51e-10,25;DOID:305,2.44e-10,106;DOID:3493,1.11e-08,2|ontology_enrichment_uberon=UBERON:0004119!6.78e-17!169;UBERON:0000925!6.78e-17!169;UBERON:0006595!6.78e-17!169;UBERON:0001007!2.11e-15!155;UBERON:0001555!2.11e-15!155;UBERON:0007026!2.11e-15!155;UBERON:0004921!2.57e-13!129;UBERON:0004185!2.57e-13!129;UBERON:0000077!3.17e-11!130;UBERON:0005911!2.87e-10!82;UBERON:0005409!5.12e-09!35;UBERON:0000466!3.62e-08!126;UBERON:0003929!5.02e-08!54;UBERON:0000160!7.57e-08!27;UBERON:0001041!1.56e-07!98|ontology_enrichment_uberon_v019=UBERON:0005409;1.66e-28;22!UBERON:0000160;5.52e-27;17!UBERON:0002423;6.45e-19;25!UBERON:0004921;1.92e-16;33!UBERON:0000059;1.65e-15;11!UBERON:0004907;3.46e-12;5!UBERON:0002108;4.24e-12;4!UBERON:0002107;1.66e-11;19!UBERON:0006925;1.66e-11;19!UBERON:0001007;1.67e-10;81!UBERON:0001155;6.42e-10;9!UBERON:0001052;3.58e-09;4!UBERON:0002394;6.99e-09;4!UBERON:0003928;6.99e-09;4!UBERON:0001708;1.03e-08;4!UBERON:0008895;1.03e-08;4!UBERON:0002294;1.68e-08;7!UBERON:0001173;1.68e-08;7!UBERON:0011159;4.76e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.62e-27,17;UBERON:0005409,4.85e-25,25;UBERON:0009854,1.32e-20,23;UBERON:0004119,1.19e-19,160;UBERON:0000925,1.19e-19,160;UBERON:0006595,1.19e-19,160;UBERON:0004921,5.09e-19,118;UBERON:0009497,6.27e-19,25;UBERON:0000015,6.27e-19,25;UBERON:0002423,6.27e-19,25;UBERON:0006235,6.27e-19,25;UBERON:0004161,6.27e-19,25;UBERON:0008835,2.48e-18,22;UBERON:0003894,2.48e-18,22;UBERON:0009856,6.46e-18,26;UBERON:0003929,1.10e-17,54;UBERON:0001007,9.20e-17,145;UBERON:0001555,9.20e-17,145;UBERON:0007026,9.20e-17,145;UBERON:0007499,7.62e-16,25;UBERON:0000059,9.72e-16,11;UBERON:0005911,4.61e-13,82;UBERON:0002108,2.93e-12,4;UBERON:0004907,4.40e-12,5;UBERON:0002107,1.96e-11,19;UBERON:0006925,1.96e-11,19;UBERON:0008836,1.96e-11,19;UBERON:0001155,4.65e-10,9;UBERON:0011216,9.46e-10,223;UBERON:0001052,3.05e-09,4;UBERON:0001708,1.22e-08,4;UBERON:0008895,1.22e-08,4;UBERON:0001046,2.28e-08,19;UBERON:0011159,5.42e-07,5|phase1_expression=0.181678379270557,0,0.140954404095971,2.00146596706261,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0.527533956456907,0,0,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,1.22261449196722,1.14940825229924,0.393553906568396,0,0,0,0.919421224478927,0.30120591877825,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,1.14950487990897,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0.795285947051099,0,0.0945348171640679,0,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0.398873881556595,0,0,0,0.198762407366705,0.860234595106124,0,0,0,0.550236083880135,0,0,0.35576626268671,0.33472061276467,0,0,0.488124115096339,0,0,0,0.22452937262617,0,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,1.93260853163297,0.818238361772504,0.860413786167011,0,0,0.232387885739037,0,0,0,0,0,1.38134921352481,0,0,0,0.337169380156203,0.482022059766964,0.110293972732394,0.217879444092406,0.474541238222193,0,0,0.769494313892781,0,0,0,0,3.80265104465493,0,1.77236972004421,0,2.09080345523293,0,0.109750285408626,0,0.301586917234893,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0,0.190254152234598,0.790204397959275,0,0,0,0,2.81201501960331,1.17587489739202,1.41775097242386,0.447792613514241,0.581267877027924,0.383382679165211,0,0.176096868026452,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0,0,0,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,0,0,0.101988829741982,0.26721740526556,0.18378979906969,0.250707539292375,0.0757786982182394,0.267964130156178,0,0,0.213233981900981,0.714193294391221,0,0,0,0.25458863311266,0.202117188958219,0,0,0.0673520530145875,0.358611026963382,0,0.488419611665847,0.426909383510862,0,0.628776414746108,0,0.366724332548599,0.813792356631477,0,0.201273793591026,0|short_description=p8@CTAGE5}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4253 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7057 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-45bp_to_uc001wve.1_5end | |||
|description=CAGE_peak_8_at_CTAGE5_5end | |||
|id=chr14:39735809..39735832,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.23e-18!254;CL:0000223!1.11e-14!59;CL:0002076!5.62e-11!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.76e-13;42!CL:0002166;1.80e-11;3!CL:0002231;4.10e-11;3!CL:0000182;5.66e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,9.23e-23,58;CL:0002076,8.12e-14,42;CL:0002166,2.25e-11,3;CL:0002231,4.59e-11,3;CL:0000182,5.91e-11,12;CL:0000066,2.05e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0009497;6.06e-22;13!UBERON:0004161;6.25e-16;11!CL:0000223;2.15e-13;58!UBERON:0001041;1.15e-10;30!UBERON:0003104;2.81e-08;31 | |||
|ontology_enrichment_disease=DOID:305!1.76e-21!106;DOID:0050687!1.05e-16!143;DOID:14566!8.59e-12!239;DOID:162!1.89e-11!235;DOID:299!2.16e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;2.32e-10;25!DOID:3493;1.06e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.51e-10,25;DOID:305,2.44e-10,106;DOID:3493,1.11e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.78e-17!169;UBERON:0000925!6.78e-17!169;UBERON:0006595!6.78e-17!169;UBERON:0001007!2.11e-15!155;UBERON:0001555!2.11e-15!155;UBERON:0007026!2.11e-15!155;UBERON:0004921!2.57e-13!129;UBERON:0004185!2.57e-13!129;UBERON:0000077!3.17e-11!130;UBERON:0005911!2.87e-10!82;UBERON:0005409!5.12e-09!35;UBERON:0000466!3.62e-08!126;UBERON:0003929!5.02e-08!54;UBERON:0000160!7.57e-08!27;UBERON:0001041!1.56e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.66e-28;22!UBERON:0000160;5.52e-27;17!UBERON:0002423;6.45e-19;25!UBERON:0004921;1.92e-16;33!UBERON:0000059;1.65e-15;11!UBERON:0004907;3.46e-12;5!UBERON:0002108;4.24e-12;4!UBERON:0002107;1.66e-11;19!UBERON:0006925;1.66e-11;19!UBERON:0001007;1.67e-10;81!UBERON:0001155;6.42e-10;9!UBERON:0001052;3.58e-09;4!UBERON:0002394;6.99e-09;4!UBERON:0003928;6.99e-09;4!UBERON:0001708;1.03e-08;4!UBERON:0008895;1.03e-08;4!UBERON:0002294;1.68e-08;7!UBERON:0001173;1.68e-08;7!UBERON:0011159;4.76e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.62e-27,17;UBERON:0005409,4.85e-25,25;UBERON:0009854,1.32e-20,23;UBERON:0004119,1.19e-19,160;UBERON:0000925,1.19e-19,160;UBERON:0006595,1.19e-19,160;UBERON:0004921,5.09e-19,118;UBERON:0009497,6.27e-19,25;UBERON:0000015,6.27e-19,25;UBERON:0002423,6.27e-19,25;UBERON:0006235,6.27e-19,25;UBERON:0004161,6.27e-19,25;UBERON:0008835,2.48e-18,22;UBERON:0003894,2.48e-18,22;UBERON:0009856,6.46e-18,26;UBERON:0003929,1.10e-17,54;UBERON:0001007,9.20e-17,145;UBERON:0001555,9.20e-17,145;UBERON:0007026,9.20e-17,145;UBERON:0007499,7.62e-16,25;UBERON:0000059,9.72e-16,11;UBERON:0005911,4.61e-13,82;UBERON:0002108,2.93e-12,4;UBERON:0004907,4.40e-12,5;UBERON:0002107,1.96e-11,19;UBERON:0006925,1.96e-11,19;UBERON:0008836,1.96e-11,19;UBERON:0001155,4.65e-10,9;UBERON:0011216,9.46e-10,223;UBERON:0001052,3.05e-09,4;UBERON:0001708,1.22e-08,4;UBERON:0008895,1.22e-08,4;UBERON:0001046,2.28e-08,19;UBERON:0011159,5.42e-07,5 | |||
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| |||
|short_description=p8@CTAGE5 | |||
}} |
Revision as of 04:32, 11 September 2013
Short description: | p8@CTAGE5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_CTAGE5_5end |
Coexpression cluster: | NA |
Association with transcript: | -45bp_to_uc001wve.1_5end |
EntrezGene: | CTAGE5 |
HGNC: | 7057 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 9.23e-23 | 58 |
endo-epithelial cell | 8.12e-14 | 42 |
epithelial cell of Malassez | 2.25e-11 | 3 |
epithelial cell of prostate | 4.59e-11 | 3 |
hepatocyte | 5.91e-11 | 12 |
epithelial cell | 2.05e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.62e-27 | 17 |
gastrointestinal system | 4.85e-25 | 25 |
digestive tract diverticulum | 1.32e-20 | 23 |
endoderm-derived structure | 1.19e-19 | 160 |
endoderm | 1.19e-19 | 160 |
presumptive endoderm | 1.19e-19 | 160 |
subdivision of digestive tract | 5.09e-19 | 118 |
epithelium of foregut-midgut junction | 6.27e-19 | 25 |
anatomical boundary | 6.27e-19 | 25 |
hepatobiliary system | 6.27e-19 | 25 |
foregut-midgut junction | 6.27e-19 | 25 |
septum transversum | 6.27e-19 | 25 |
hepatic diverticulum | 2.48e-18 | 22 |
liver primordium | 2.48e-18 | 22 |
sac | 6.46e-18 | 26 |
gut epithelium | 1.10e-17 | 54 |
digestive system | 9.20e-17 | 145 |
digestive tract | 9.20e-17 | 145 |
primitive gut | 9.20e-17 | 145 |
epithelial sac | 7.62e-16 | 25 |
large intestine | 9.72e-16 | 11 |
endo-epithelium | 4.61e-13 | 82 |
small intestine | 2.93e-12 | 4 |
lower digestive tract | 4.40e-12 | 5 |
liver | 1.96e-11 | 19 |
digestive gland | 1.96e-11 | 19 |
liver bud | 1.96e-11 | 19 |
colon | 4.65e-10 | 9 |
organ system subdivision | 9.46e-10 | 223 |
rectum | 3.05e-09 | 4 |
jaw skeleton | 1.22e-08 | 4 |
splanchnocranium | 1.22e-08 | 4 |
hindgut | 2.28e-08 | 19 |
primary subdivision of cranial skeletal system | 5.42e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.51e-10 | 25 |
carcinoma | 2.44e-10 | 106 |
signet ring cell adenocarcinoma | 1.11e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.