FFCP PHASE1:Hg19::chr14:22958300..22958349,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=23bp_to_uc001wek.2_5end|coexpression_cluster_id=C40|description=CAGE_peak_2_at_uc001wek.2_5end|id=chr14:22958300..22958349,+|ontology_enrichment_celltype=CL:0000542!8.78e-12!53;CL:0000051!8.78e-12!53;CL:0000838!9.14e-11!52;CL:0000623!1.86e-07!3;CL:0000825!1.86e-07!3|ontology_enrichment_celltype_v019=CL:0000946;2.87e-10;1!CL:0000786;2.87e-10;1!CL:0002127;3.96e-10;1!CL:0000911;3.96e-10;1!CL:0000814;3.96e-10;1!CL:0000945;2.35e-09;24|ontology_enrichment_celltype_v019_2=CL:0000946,2.74e-10,1;CL:0000786,2.74e-10,1;CL:0000980,2.74e-10,1;CL:0002127,3.61e-10,1;CL:0000914,3.61e-10,1;CL:0000911,3.61e-10,1;CL:0000814,3.61e-10,1;CL:0002042,3.61e-10,1;CL:0002039,3.61e-10,1;CL:0002040,3.61e-10,1;CL:0002041,3.61e-10,1;CL:0000945,2.20e-09,24;CL:0000826,2.20e-09,24|ontology_enrichment_development_v019=UBERON:0003056;1.60e-13;3!UBERON:0010227;9.83e-11;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;9.40e-19;2!DOID:630;2.28e-10;1!DOID:0050177;2.28e-10;1!DOID:0050427;2.28e-10;1!DOID:178;3.96e-10;1!DOID:326;3.96e-10;1!DOID:3978;3.96e-10;1!DOID:3394;3.96e-10;1!DOID:5844;3.96e-10;1!DOID:1287;7.48e-10;4|ontology_enrichment_disease_v019_2=DOID:114,1.03e-18,2;DOID:630,2.08e-10,1;DOID:0050177,2.08e-10,1;DOID:0050427,2.08e-10,1;DOID:178,4.33e-10,1;DOID:326,4.33e-10,1;DOID:3978,4.33e-10,1;DOID:3394,4.33e-10,1;DOID:5844,4.33e-10,1;DOID:1287,7.83e-10,4|ontology_enrichment_uberon=UBERON:0007023!3.02e-11!115;UBERON:0002370!9.81e-11!4;UBERON:0005058!9.81e-11!4;UBERON:0009113!9.81e-11!4;UBERON:0003295!9.81e-11!4;UBERON:0005562!9.81e-11!4;UBERON:0004177!9.54e-09!7;UBERON:0003351!4.01e-07!6|ontology_enrichment_uberon_v019=UBERON:0001905;2.17e-19;2!UBERON:0002757;2.17e-19;2!UBERON:0010134;2.17e-19;2!UBERON:0005408;2.17e-19;2!UBERON:0001899;2.17e-19;2!UBERON:0002079;9.83e-11;1!UBERON:0002135;1.19e-10;1!UBERON:0003296;3.62e-10;4!UBERON:0010133;3.62e-10;4!UBERON:0002784;3.62e-10;4!UBERON:0000966;1.83e-08;5!UBERON:0005388;1.83e-08;5!UBERON:0001802;1.83e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.38e-19,2;UBERON:0002757,2.38e-19,2;UBERON:0010134,2.38e-19,2;UBERON:0005408,2.38e-19,2;UBERON:0001899,2.38e-19,2;UBERON:0002079,9.84e-11,1;UBERON:0002135,1.19e-10,1;UBERON:0003296,3.79e-10,4;UBERON:0010133,3.79e-10,4;UBERON:0002784,3.79e-10,4;UBERON:0002370,1.02e-09,4;UBERON:0005058,1.02e-09,4;UBERON:0009113,1.02e-09,4;UBERON:0003295,1.02e-09,4;UBERON:0005562,1.02e-09,4;UBERON:0000966,3.44e-07,6;UBERON:0005388,3.44e-07,6;UBERON:0001802,3.44e-07,6;UBERON:0003351,9.25e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9602456483402,4.76183418809685,4.95877922276179,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557052284425868,0,0,0,0.25618263945135,0.130059347559878,0,0.829050053357545,0,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56919201590938,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,4.05931470284398,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0,24.7016727509752,0,0.276283915531148,0,0,0.492339221844278,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.865554558968364,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,53.7834163057667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7027776305341,0,0,1.19807400299395,3.43380838509257,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.209818352539992,0,0,0,15.7232971802141,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.496166021811951,0,0.243585196761792,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,4.28880768302315,0,0,0,0,1.40500471742064,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=23bp_to_uc001wek.2_5end | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_2_at_uc001wek.2_5end | |||
|id=chr14:22958300..22958349,+ | |||
|ontology_enrichment_celltype=CL:0000542!8.78e-12!53;CL:0000051!8.78e-12!53;CL:0000838!9.14e-11!52;CL:0000623!1.86e-07!3;CL:0000825!1.86e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000946;2.87e-10;1!CL:0000786;2.87e-10;1!CL:0002127;3.96e-10;1!CL:0000911;3.96e-10;1!CL:0000814;3.96e-10;1!CL:0000945;2.35e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,2.74e-10,1;CL:0000786,2.74e-10,1;CL:0000980,2.74e-10,1;CL:0002127,3.61e-10,1;CL:0000914,3.61e-10,1;CL:0000911,3.61e-10,1;CL:0000814,3.61e-10,1;CL:0002042,3.61e-10,1;CL:0002039,3.61e-10,1;CL:0002040,3.61e-10,1;CL:0002041,3.61e-10,1;CL:0000945,2.20e-09,24;CL:0000826,2.20e-09,24 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.60e-13;3!UBERON:0010227;9.83e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;9.40e-19;2!DOID:630;2.28e-10;1!DOID:0050177;2.28e-10;1!DOID:0050427;2.28e-10;1!DOID:178;3.96e-10;1!DOID:326;3.96e-10;1!DOID:3978;3.96e-10;1!DOID:3394;3.96e-10;1!DOID:5844;3.96e-10;1!DOID:1287;7.48e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.03e-18,2;DOID:630,2.08e-10,1;DOID:0050177,2.08e-10,1;DOID:0050427,2.08e-10,1;DOID:178,4.33e-10,1;DOID:326,4.33e-10,1;DOID:3978,4.33e-10,1;DOID:3394,4.33e-10,1;DOID:5844,4.33e-10,1;DOID:1287,7.83e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.02e-11!115;UBERON:0002370!9.81e-11!4;UBERON:0005058!9.81e-11!4;UBERON:0009113!9.81e-11!4;UBERON:0003295!9.81e-11!4;UBERON:0005562!9.81e-11!4;UBERON:0004177!9.54e-09!7;UBERON:0003351!4.01e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.17e-19;2!UBERON:0002757;2.17e-19;2!UBERON:0010134;2.17e-19;2!UBERON:0005408;2.17e-19;2!UBERON:0001899;2.17e-19;2!UBERON:0002079;9.83e-11;1!UBERON:0002135;1.19e-10;1!UBERON:0003296;3.62e-10;4!UBERON:0010133;3.62e-10;4!UBERON:0002784;3.62e-10;4!UBERON:0000966;1.83e-08;5!UBERON:0005388;1.83e-08;5!UBERON:0001802;1.83e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.38e-19,2;UBERON:0002757,2.38e-19,2;UBERON:0010134,2.38e-19,2;UBERON:0005408,2.38e-19,2;UBERON:0001899,2.38e-19,2;UBERON:0002079,9.84e-11,1;UBERON:0002135,1.19e-10,1;UBERON:0003296,3.79e-10,4;UBERON:0010133,3.79e-10,4;UBERON:0002784,3.79e-10,4;UBERON:0002370,1.02e-09,4;UBERON:0005058,1.02e-09,4;UBERON:0009113,1.02e-09,4;UBERON:0003295,1.02e-09,4;UBERON:0005562,1.02e-09,4;UBERON:0000966,3.44e-07,6;UBERON:0005388,3.44e-07,6;UBERON:0001802,3.44e-07,6;UBERON:0003351,9.25e-07,6 | |||
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|short_description=p2@uc001wek.2 | |||
}} |
Revision as of 03:51, 11 September 2013
Short description: | p2@uc001wek.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_uc001wek.2_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 23bp_to_uc001wek.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 2.74e-10 | 1 |
plasma cell | 2.74e-10 | 1 |
plasmablast | 2.74e-10 | 1 |
innate effector T cell | 3.61e-10 | 1 |
immature NK T cell | 3.61e-10 | 1 |
effector T cell | 3.61e-10 | 1 |
mature NK T cell | 3.61e-10 | 1 |
immature NK T cell stage IV | 3.61e-10 | 1 |
immature NK T cell stage I | 3.61e-10 | 1 |
immature NK T cell stage II | 3.61e-10 | 1 |
immature NK T cell stage III | 3.61e-10 | 1 |
lymphocyte of B lineage | 2.20e-09 | 24 |
pro-B cell | 2.20e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.38e-19 | 2 |
regional part of epithalamus | 2.38e-19 | 2 |
secretory circumventricular organ | 2.38e-19 | 2 |
circumventricular organ | 2.38e-19 | 2 |
epithalamus | 2.38e-19 | 2 |
left cardiac atrium | 9.84e-11 | 1 |
mitral valve | 1.19e-10 | 1 |
gland of diencephalon | 3.79e-10 | 4 |
neuroendocrine gland | 3.79e-10 | 4 |
regional part of diencephalon | 3.79e-10 | 4 |
thymus | 1.02e-09 | 4 |
hemolymphoid system gland | 1.02e-09 | 4 |
thymic region | 1.02e-09 | 4 |
pharyngeal gland | 1.02e-09 | 4 |
thymus primordium | 1.02e-09 | 4 |
retina | 3.44e-07 | 6 |
photoreceptor array | 3.44e-07 | 6 |
posterior segment of eyeball | 3.44e-07 | 6 |
pharyngeal epithelium | 9.25e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.03e-18 | 2 |
genetic disease | 2.08e-10 | 1 |
monogenic disease | 2.08e-10 | 1 |
xeroderma pigmentosum | 2.08e-10 | 1 |
vascular disease | 4.33e-10 | 1 |
ischemia | 4.33e-10 | 1 |
extrinsic cardiomyopathy | 4.33e-10 | 1 |
myocardial ischemia | 4.33e-10 | 1 |
myocardial infarction | 4.33e-10 | 1 |
cardiovascular system disease | 7.83e-10 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.