FFCP PHASE1:Hg19::chr12:129389933..129389956,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C5|description=CAGE_peak_at_chr12:129389933..129389956,+|id=chr12:129389933..129389956,+|ontology_enrichment_celltype=CL:0000181!1.72e-22!12;CL:0000417!1.72e-22!12;CL:0000668!1.72e-22!12;CL:0000414!1.72e-22!12;CL:0000412!1.72e-22!12;CL:0000182!1.72e-22!12;CL:0000223!4.54e-07!59;CL:0000775!7.70e-07!3|ontology_enrichment_celltype_v019=CL:0000182;2.58e-30;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.45e-30,12;CL:0000223,6.14e-07,58|ontology_enrichment_development_v019=UBERON:0004161;1.95e-15;11!UBERON:0009497;3.12e-13;13!CL:0000223;6.79e-07;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0008835!1.70e-36!22;UBERON:0003894!1.70e-36!22;UBERON:0009854!6.67e-35!23;UBERON:0007499!4.27e-32!25;UBERON:0009497!4.27e-32!25;UBERON:0000015!4.27e-32!25;UBERON:0002423!4.27e-32!25;UBERON:0006235!4.27e-32!25;UBERON:0004161!4.27e-32!25;UBERON:0002107!2.38e-31!19;UBERON:0006925!2.38e-31!19;UBERON:0008836!2.38e-31!19;UBERON:0009856!7.45e-31!26;UBERON:0005057!6.66e-23!26;UBERON:0002365!3.39e-19!31;UBERON:0002330!3.39e-19!31;UBERON:0003929!4.20e-19!54;UBERON:0002368!5.44e-17!35;UBERON:0000949!3.50e-13!45;UBERON:0005911!2.11e-12!82;UBERON:0005172!9.43e-11!55;UBERON:0005173!9.43e-11!55;UBERON:0002530!5.23e-10!59;UBERON:0002417!1.13e-09!61;UBERON:0000916!1.13e-09!61;UBERON:0001041!6.46e-08!98;UBERON:0004921!1.36e-07!129;UBERON:0004185!1.36e-07!129;UBERON:0000490!4.09e-07!138|ontology_enrichment_uberon_v019=UBERON:0002107;3.17e-52;19!UBERON:0006925;3.17e-52;19!UBERON:0002423;6.36e-40;25!UBERON:0002365;2.95e-32;31!UBERON:0002330;2.95e-32;31!UBERON:0002368;7.96e-28;33!UBERON:0000949;4.44e-20;43!UBERON:0005172;2.19e-14;52!UBERON:0005173;2.19e-14;52!UBERON:0002417;4.86e-11;58!UBERON:0000916;4.86e-11;58!UBERON:0002530;2.15e-10;57!UBERON:0001007;3.16e-10;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.17e-52,19;UBERON:0006925,3.17e-52,19;UBERON:0008836,3.17e-52,19;UBERON:0008835,3.09e-45,22;UBERON:0003894,3.09e-45,22;UBERON:0009854,2.60e-43,23;UBERON:0007499,6.36e-40,25;UBERON:0009497,6.36e-40,25;UBERON:0000015,6.36e-40,25;UBERON:0002423,6.36e-40,25;UBERON:0006235,6.36e-40,25;UBERON:0004161,6.36e-40,25;UBERON:0009856,2.01e-38,26;UBERON:0002365,2.26e-32,31;UBERON:0002330,2.26e-32,31;UBERON:0002368,9.00e-29,35;UBERON:0000949,1.46e-22,45;UBERON:0003929,6.22e-19,54;UBERON:0005172,6.22e-19,54;UBERON:0005173,6.22e-19,54;UBERON:0002530,2.16e-17,59;UBERON:0002417,4.10e-17,60;UBERON:0000916,4.10e-17,60;UBERON:0005911,1.04e-12,82;UBERON:0001041,5.13e-12,87;UBERON:0005177,1.95e-10,101;UBERON:0009569,1.80e-09,112;UBERON:0003914,4.32e-09,117;UBERON:0004921,6.01e-09,118;UBERON:0005256,9.67e-09,122;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0000490,2.68e-07,148;UBERON:0001048,8.66e-07,160;UBERON:0003104,8.66e-07,160;UBERON:0009142,8.66e-07,160;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,1.96565443335525,2.36315962672562,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12932817873289,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr12:129389933..129389956,+ | |||
|id=chr12:129389933..129389956,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.72e-22!12;CL:0000417!1.72e-22!12;CL:0000668!1.72e-22!12;CL:0000414!1.72e-22!12;CL:0000412!1.72e-22!12;CL:0000182!1.72e-22!12;CL:0000223!4.54e-07!59;CL:0000775!7.70e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.58e-30;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.45e-30,12;CL:0000223,6.14e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.95e-15;11!UBERON:0009497;3.12e-13;13!CL:0000223;6.79e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;3.17e-52;19!UBERON:0006925;3.17e-52;19!UBERON:0002423;6.36e-40;25!UBERON:0002365;2.95e-32;31!UBERON:0002330;2.95e-32;31!UBERON:0002368;7.96e-28;33!UBERON:0000949;4.44e-20;43!UBERON:0005172;2.19e-14;52!UBERON:0005173;2.19e-14;52!UBERON:0002417;4.86e-11;58!UBERON:0000916;4.86e-11;58!UBERON:0002530;2.15e-10;57!UBERON:0001007;3.16e-10;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.17e-52,19;UBERON:0006925,3.17e-52,19;UBERON:0008836,3.17e-52,19;UBERON:0008835,3.09e-45,22;UBERON:0003894,3.09e-45,22;UBERON:0009854,2.60e-43,23;UBERON:0007499,6.36e-40,25;UBERON:0009497,6.36e-40,25;UBERON:0000015,6.36e-40,25;UBERON:0002423,6.36e-40,25;UBERON:0006235,6.36e-40,25;UBERON:0004161,6.36e-40,25;UBERON:0009856,2.01e-38,26;UBERON:0002365,2.26e-32,31;UBERON:0002330,2.26e-32,31;UBERON:0002368,9.00e-29,35;UBERON:0000949,1.46e-22,45;UBERON:0003929,6.22e-19,54;UBERON:0005172,6.22e-19,54;UBERON:0005173,6.22e-19,54;UBERON:0002530,2.16e-17,59;UBERON:0002417,4.10e-17,60;UBERON:0000916,4.10e-17,60;UBERON:0005911,1.04e-12,82;UBERON:0001041,5.13e-12,87;UBERON:0005177,1.95e-10,101;UBERON:0009569,1.80e-09,112;UBERON:0003914,4.32e-09,117;UBERON:0004921,6.01e-09,118;UBERON:0005256,9.67e-09,122;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0000490,2.68e-07,148;UBERON:0001048,8.66e-07,160;UBERON:0003104,8.66e-07,160;UBERON:0009142,8.66e-07,160;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80265104465493,1.96565443335525,2.36315962672562,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.12932817873289,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:129389933..129389956,+ | |||
}} |
Revision as of 21:43, 10 September 2013
Short description: | p@chr12:129389933..129389956, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:129389933..129389956, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.45e-30 | 12 |
endodermal cell | 6.14e-07 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.