FFCP PHASE1:Hg19::chr12:96337061..96337078,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=144193|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28577|TSSclassifier=S|UniProt=Q96NU7,B3KVC5|association_with_transcript=0bp_to_ENST00000266736,NM_152435,uc001tel.1,uc009zth.1_5end|coexpression_cluster_id=C5|description=CAGE_peak_2_at_AMDHD1_5end|id=chr12:96337061..96337078,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;2.55e-25;12!CL:0000235;3.36e-13;6|ontology_enrichment_celltype_v019_2=CL:0000182,2.46e-25,12;CL:0000235,2.79e-13,6|ontology_enrichment_development_v019=UBERON:0004161;4.29e-21;11!UBERON:0009497;1.05e-17;13!UBERON:0001041;1.88e-14;30!UBERON:0003104;8.60e-09;31|ontology_enrichment_disease=DOID:305!2.53e-10!106;DOID:14566!5.25e-09!239;DOID:162!4.39e-08!235;DOID:0050687!7.86e-08!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000077!3.03e-13!130;UBERON:0004921!7.18e-12!129;UBERON:0004185!7.18e-12!129;UBERON:0001007!2.73e-11!155;UBERON:0001555!2.73e-11!155;UBERON:0007026!2.73e-11!155;UBERON:0001041!6.57e-11!98;UBERON:0004119!1.46e-10!169;UBERON:0000925!1.46e-10!169;UBERON:0006595!1.46e-10!169;UBERON:0005911!1.39e-07!82;UBERON:0000949!2.63e-07!45;UBERON:0001737!3.12e-07!9;UBERON:0005057!4.09e-07!26|ontology_enrichment_uberon_v019=UBERON:0002107;1.70e-24;19!UBERON:0006925;1.70e-24;19!UBERON:0002423;3.77e-18;25!UBERON:0002365;6.09e-14;31!UBERON:0002330;6.09e-14;31!UBERON:0002368;4.08e-12;33!UBERON:0000949;2.80e-09;43|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.65e-24,19;UBERON:0006925,1.65e-24,19;UBERON:0008836,1.65e-24,19;UBERON:0008835,6.70e-21,22;UBERON:0003894,6.70e-21,22;UBERON:0009854,6.60e-20,23;UBERON:0007499,3.70e-18,25;UBERON:0009497,3.70e-18,25;UBERON:0000015,3.70e-18,25;UBERON:0002423,3.70e-18,25;UBERON:0006235,3.70e-18,25;UBERON:0004161,3.70e-18,25;UBERON:0009856,2.19e-17,26;UBERON:0002365,2.87e-14,31;UBERON:0002330,2.87e-14,31;UBERON:0001041,1.79e-12,87;UBERON:0002368,2.04e-12,35;UBERON:0004921,8.80e-12,118;UBERON:0000949,3.68e-11,45;UBERON:0005172,5.27e-09,54;UBERON:0005173,5.27e-09,54;UBERON:0003929,6.56e-09,54;UBERON:0001007,8.67e-09,145;UBERON:0001555,8.67e-09,145;UBERON:0007026,8.67e-09,145;UBERON:0005911,8.86e-09,82;UBERON:0004119,1.48e-08,160;UBERON:0000925,1.48e-08,160;UBERON:0006595,1.48e-08,160;UBERON:0002530,5.64e-08,59;UBERON:0002417,6.85e-08,60;UBERON:0000916,6.85e-08,60;UBERON:0005177,9.84e-08,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0.919421224478927,0,0.369754010166788,0.0774672005803016,0.284338464974843,0,0.553995408531877,0.401088894940283,0,1.56740831967947,0.32389366601898,0.515151135268373,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0.211255286311942,0,0.628975936525128,0.336985893439485,0.150176892841506,0.964353520182481,0.570025487482497,0.19891667719909,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0.473447805734733,0,0,0.294605907474837,0.443067789167242,0,0,0.260118695119756,0,0,0.289803085735052,0.444859689486181,0.267540828089713,0,0.339928028092699,0.383220493601921,0.68725489096526,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0.76791966692651,0,0.473554504088034,0,0.201606743224732,0.802320587350522,0,0,0,0,0.361439152384566,0.50133791063589,0.869079113764942,0,0,0.283604451492204,0,0.175669571386252,0.523916301990851,0,0.370784442784429,0.324547393654683,0.348259474598534,0.797747763113191,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0.368502951935304,0.206651562351531,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0.386521706326594,0,0,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.709840800239063,1.18009283054671,0.964044119533928,0.882351781859152,1.30727666455444,1.18635309555548,0.539325232640658,0.588664395376038,0.38474715694639,0,0,0.4115740113314,0,19.0132552232746,9.82827216677626,13.5881678536723,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0.201057944823262,0,0,2.07986957055916,0,0,0,0,0,0,0,0.858486162094873,1.47730203652438,1.40402559083543,0.297262324577456,0,0,0,0,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0.432359860250884,0.12624243342638,0.126995788584338,0,1.17217447210047,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,2.51128545716063,2.10833939483032,0,0,0,0.144781306667579,0,0.17906096323989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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=144193 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28577 | |||
|TSSclassifier=S | |||
|UniProt=Q96NU7,B3KVC5 | |||
|association_with_transcript=0bp_to_ENST00000266736,NM_152435,uc001tel.1,uc009zth.1_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_AMDHD1_5end | |||
|id=chr12:96337061..96337078,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.55e-25;12!CL:0000235;3.36e-13;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.46e-25,12;CL:0000235,2.79e-13,6 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.29e-21;11!UBERON:0009497;1.05e-17;13!UBERON:0001041;1.88e-14;30!UBERON:0003104;8.60e-09;31 | |||
|ontology_enrichment_disease=DOID:305!2.53e-10!106;DOID:14566!5.25e-09!239;DOID:162!4.39e-08!235;DOID:0050687!7.86e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000077!3.03e-13!130;UBERON:0004921!7.18e-12!129;UBERON:0004185!7.18e-12!129;UBERON:0001007!2.73e-11!155;UBERON:0001555!2.73e-11!155;UBERON:0007026!2.73e-11!155;UBERON:0001041!6.57e-11!98;UBERON:0004119!1.46e-10!169;UBERON:0000925!1.46e-10!169;UBERON:0006595!1.46e-10!169;UBERON:0005911!1.39e-07!82;UBERON:0000949!2.63e-07!45;UBERON:0001737!3.12e-07!9;UBERON:0005057!4.09e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.70e-24;19!UBERON:0006925;1.70e-24;19!UBERON:0002423;3.77e-18;25!UBERON:0002365;6.09e-14;31!UBERON:0002330;6.09e-14;31!UBERON:0002368;4.08e-12;33!UBERON:0000949;2.80e-09;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.65e-24,19;UBERON:0006925,1.65e-24,19;UBERON:0008836,1.65e-24,19;UBERON:0008835,6.70e-21,22;UBERON:0003894,6.70e-21,22;UBERON:0009854,6.60e-20,23;UBERON:0007499,3.70e-18,25;UBERON:0009497,3.70e-18,25;UBERON:0000015,3.70e-18,25;UBERON:0002423,3.70e-18,25;UBERON:0006235,3.70e-18,25;UBERON:0004161,3.70e-18,25;UBERON:0009856,2.19e-17,26;UBERON:0002365,2.87e-14,31;UBERON:0002330,2.87e-14,31;UBERON:0001041,1.79e-12,87;UBERON:0002368,2.04e-12,35;UBERON:0004921,8.80e-12,118;UBERON:0000949,3.68e-11,45;UBERON:0005172,5.27e-09,54;UBERON:0005173,5.27e-09,54;UBERON:0003929,6.56e-09,54;UBERON:0001007,8.67e-09,145;UBERON:0001555,8.67e-09,145;UBERON:0007026,8.67e-09,145;UBERON:0005911,8.86e-09,82;UBERON:0004119,1.48e-08,160;UBERON:0000925,1.48e-08,160;UBERON:0006595,1.48e-08,160;UBERON:0002530,5.64e-08,59;UBERON:0002417,6.85e-08,60;UBERON:0000916,6.85e-08,60;UBERON:0005177,9.84e-08,101 | |||
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| |||
|short_description=p2@AMDHD1 | |||
}} |
Revision as of 01:07, 11 September 2013
Short description: | p2@AMDHD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_AMDHD1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000266736, NM_152435, uc001tel.1, uc009zth.1_5end |
EntrezGene: | AMDHD1 |
HGNC: | 28577 |
UniProt: | Q96NU7B3KVC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.46e-25 | 12 |
macrophage | 2.79e-13 | 6 |
Ontology term | p-value | n |
---|---|---|
liver | 1.65e-24 | 19 |
digestive gland | 1.65e-24 | 19 |
liver bud | 1.65e-24 | 19 |
hepatic diverticulum | 6.70e-21 | 22 |
liver primordium | 6.70e-21 | 22 |
digestive tract diverticulum | 6.60e-20 | 23 |
epithelial sac | 3.70e-18 | 25 |
epithelium of foregut-midgut junction | 3.70e-18 | 25 |
anatomical boundary | 3.70e-18 | 25 |
hepatobiliary system | 3.70e-18 | 25 |
foregut-midgut junction | 3.70e-18 | 25 |
septum transversum | 3.70e-18 | 25 |
sac | 2.19e-17 | 26 |
exocrine gland | 2.87e-14 | 31 |
exocrine system | 2.87e-14 | 31 |
foregut | 1.79e-12 | 87 |
endocrine gland | 2.04e-12 | 35 |
subdivision of digestive tract | 8.80e-12 | 118 |
endocrine system | 3.68e-11 | 45 |
abdomen element | 5.27e-09 | 54 |
abdominal segment element | 5.27e-09 | 54 |
gut epithelium | 6.56e-09 | 54 |
digestive system | 8.67e-09 | 145 |
digestive tract | 8.67e-09 | 145 |
primitive gut | 8.67e-09 | 145 |
endo-epithelium | 8.86e-09 | 82 |
endoderm-derived structure | 1.48e-08 | 160 |
endoderm | 1.48e-08 | 160 |
presumptive endoderm | 1.48e-08 | 160 |
gland | 5.64e-08 | 59 |
abdominal segment of trunk | 6.85e-08 | 60 |
abdomen | 6.85e-08 | 60 |
trunk region element | 9.84e-08 | 101 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.