FFCP PHASE1:Hg19::chr12:78359999..78360035,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=89795|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15998|TSSclassifier=S|UniProt=|association_with_transcript=-20bp_to_ENST00000547725,ENST00000550503_5end|coexpression_cluster_id=C41|description=CAGE_peak_13_at_NAV3_5end|id=chr12:78359999..78360035,+|ontology_enrichment_celltype=CL:0002586!2.45e-07!3|ontology_enrichment_celltype_v019=CL:0002586;5.17e-25;3!CL:0002174;1.08e-19;1!CL:0000501;1.08e-19;1!CL:0000149;4.92e-19;4!CL:0000047;2.72e-10;2!CL:0000174;1.93e-07;3|ontology_enrichment_celltype_v019_2=CL:0002586,7.02e-25,3;CL:0002174,1.08e-19,1;CL:0000501,1.08e-19,1;CL:0000149,6.18e-19,4;CL:0000174,1.93e-07,3|ontology_enrichment_development_v019=UBERON:0003056;3.81e-25;3!UBERON:0005425;3.25e-19;1!UBERON:0006241;2.79e-07;3!UBERON:0003057;2.79e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.52e-22!94;UBERON:0001016!1.52e-22!94;UBERON:0005743!1.02e-21!86;UBERON:0001049!9.73e-21!57;UBERON:0005068!9.73e-21!57;UBERON:0006241!9.73e-21!57;UBERON:0007135!9.73e-21!57;UBERON:0002780!9.36e-19!41;UBERON:0001890!9.36e-19!41;UBERON:0006240!9.36e-19!41;UBERON:0003075!3.37e-18!86;UBERON:0007284!3.37e-18!86;UBERON:0003080!3.73e-18!42;UBERON:0002616!4.89e-18!59;UBERON:0002020!1.54e-17!34;UBERON:0003528!1.54e-17!34;UBERON:0001893!1.97e-17!34;UBERON:0001017!3.05e-17!82;UBERON:0002346!6.18e-17!90;UBERON:0002791!1.94e-16!33;UBERON:0000955!2.34e-16!69;UBERON:0006238!2.34e-16!69;UBERON:0003056!4.75e-16!61;UBERON:0001869!7.54e-15!32;UBERON:0007023!3.96e-14!115;UBERON:0000475!1.54e-13!365;UBERON:0000153!2.83e-13!129;UBERON:0007811!2.83e-13!129;UBERON:0004121!7.94e-13!169;UBERON:0000924!3.06e-12!173;UBERON:0006601!3.06e-12!173;UBERON:0000033!6.54e-12!123;UBERON:0000483!2.28e-11!309;UBERON:0000119!4.31e-11!312;UBERON:0002619!2.75e-10!22;UBERON:0000956!2.89e-10!25;UBERON:0000203!2.89e-10!25;UBERON:0002308!1.16e-09!9;UBERON:0000125!1.16e-09!9;UBERON:0001950!1.23e-09!20;UBERON:0002298!1.86e-08!8;UBERON:0000064!3.52e-08!219;UBERON:0000966!2.05e-07!5;UBERON:0005388!2.05e-07!5;UBERON:0001802!2.05e-07!5;UBERON:0001781!2.45e-07!3;UBERON:0001782!2.45e-07!3;UBERON:0005424!2.45e-07!3;UBERON:0002420!2.89e-07!9;UBERON:0007245!2.89e-07!9;UBERON:0010009!2.89e-07!9;UBERON:0010011!2.89e-07!9;UBERON:0000454!2.89e-07!9;UBERON:0000025!4.39e-07!194;UBERON:0000200!4.85e-07!6;UBERON:0009663!9.52e-07!7|ontology_enrichment_uberon_v019=UBERON:0000966;2.93e-33;5!UBERON:0005388;2.93e-33;5!UBERON:0001802;2.93e-33;5!UBERON:0001781;5.17e-25;3!UBERON:0001782;5.17e-25;3!UBERON:0002104;1.17e-21;21!UBERON:0007029;3.25e-19;1!UBERON:0000941;3.25e-19;1!UBERON:0001785;3.25e-19;1!UBERON:0002464;3.25e-19;1!UBERON:0004904;3.25e-19;1!UBERON:0001021;3.25e-19;1!UBERON:0001032;5.63e-19;24!UBERON:0004456;5.63e-19;24!UBERON:0000970;6.42e-15;20!UBERON:0000020;5.07e-13;23!UBERON:0003714;2.72e-10;2!UBERON:0001875;2.72e-10;2!UBERON:0005162;2.72e-10;2!UBERON:0000122;2.72e-10;2!UBERON:0006514;2.72e-10;2!UBERON:0000019;2.93e-09;19!UBERON:0000047;2.93e-09;19!UBERON:0004088;2.93e-09;19!UBERON:0010230;2.93e-09;19!UBERON:0001456;1.97e-08;21!UBERON:0007625;1.59e-07;11!UBERON:0002240;2.79e-07;3!UBERON:0005174;2.79e-07;3!UBERON:0001137;2.79e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000966,2.88e-48,6;UBERON:0005388,2.88e-48,6;UBERON:0001802,2.88e-48,6;UBERON:0001781,7.56e-41,4;UBERON:0001782,7.02e-25,3;UBERON:0005424,7.02e-25,3;UBERON:0000970,1.27e-21,21;UBERON:0002104,1.27e-21,21;UBERON:0007029,2.25e-19,1;UBERON:0000941,2.71e-19,1;UBERON:0001785,2.71e-19,1;UBERON:0002464,2.71e-19,1;UBERON:0004904,2.71e-19,1;UBERON:0001021,2.71e-19,1;UBERON:0003902,2.71e-19,1;UBERON:0005425,2.71e-19,1;UBERON:0000020,6.07e-19,24;UBERON:0001032,6.07e-19,24;UBERON:0004456,6.07e-19,24;UBERON:0000019,7.97e-15,20;UBERON:0000047,7.97e-15,20;UBERON:0010312,7.97e-15,20;UBERON:0004088,7.97e-15,20;UBERON:0010230,7.97e-15,20;UBERON:0003072,7.97e-15,20;UBERON:0004128,7.97e-15,20;UBERON:0003071,7.97e-15,20;UBERON:0001456,1.64e-13,22;UBERON:0003714,2.49e-10,2;UBERON:0005162,2.49e-10,2;UBERON:0000122,2.49e-10,2;UBERON:0001875,3.27e-10,2;UBERON:0006514,3.27e-10,2;UBERON:0005085,1.10e-09,31;UBERON:0010371,4.54e-08,104;UBERON:0003075,1.17e-07,82;UBERON:0007284,1.17e-07,82;UBERON:0007625,1.73e-07,11;UBERON:0003056,2.42e-07,61;UBERON:0002346,2.70e-07,86;UBERON:0002240,2.97e-07,3;UBERON:0005174,2.97e-07,3;UBERON:0001137,2.97e-07,3|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,1.8672662123986,0,0,0,0,0,0,0,0.149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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=89795 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15998 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-20bp_to_ENST00000547725,ENST00000550503_5end | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_13_at_NAV3_5end | |||
|id=chr12:78359999..78360035,+ | |||
|ontology_enrichment_celltype=CL:0002586!2.45e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002586;5.17e-25;3!CL:0002174;1.08e-19;1!CL:0000501;1.08e-19;1!CL:0000149;4.92e-19;4!CL:0000047;2.72e-10;2!CL:0000174;1.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,7.02e-25,3;CL:0002174,1.08e-19,1;CL:0000501,1.08e-19,1;CL:0000149,6.18e-19,4;CL:0000174,1.93e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;3.81e-25;3!UBERON:0005425;3.25e-19;1!UBERON:0006241;2.79e-07;3!UBERON:0003057;2.79e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.52e-22!94;UBERON:0001016!1.52e-22!94;UBERON:0005743!1.02e-21!86;UBERON:0001049!9.73e-21!57;UBERON:0005068!9.73e-21!57;UBERON:0006241!9.73e-21!57;UBERON:0007135!9.73e-21!57;UBERON:0002780!9.36e-19!41;UBERON:0001890!9.36e-19!41;UBERON:0006240!9.36e-19!41;UBERON:0003075!3.37e-18!86;UBERON:0007284!3.37e-18!86;UBERON:0003080!3.73e-18!42;UBERON:0002616!4.89e-18!59;UBERON:0002020!1.54e-17!34;UBERON:0003528!1.54e-17!34;UBERON:0001893!1.97e-17!34;UBERON:0001017!3.05e-17!82;UBERON:0002346!6.18e-17!90;UBERON:0002791!1.94e-16!33;UBERON:0000955!2.34e-16!69;UBERON:0006238!2.34e-16!69;UBERON:0003056!4.75e-16!61;UBERON:0001869!7.54e-15!32;UBERON:0007023!3.96e-14!115;UBERON:0000475!1.54e-13!365;UBERON:0000153!2.83e-13!129;UBERON:0007811!2.83e-13!129;UBERON:0004121!7.94e-13!169;UBERON:0000924!3.06e-12!173;UBERON:0006601!3.06e-12!173;UBERON:0000033!6.54e-12!123;UBERON:0000483!2.28e-11!309;UBERON:0000119!4.31e-11!312;UBERON:0002619!2.75e-10!22;UBERON:0000956!2.89e-10!25;UBERON:0000203!2.89e-10!25;UBERON:0002308!1.16e-09!9;UBERON:0000125!1.16e-09!9;UBERON:0001950!1.23e-09!20;UBERON:0002298!1.86e-08!8;UBERON:0000064!3.52e-08!219;UBERON:0000966!2.05e-07!5;UBERON:0005388!2.05e-07!5;UBERON:0001802!2.05e-07!5;UBERON:0001781!2.45e-07!3;UBERON:0001782!2.45e-07!3;UBERON:0005424!2.45e-07!3;UBERON:0002420!2.89e-07!9;UBERON:0007245!2.89e-07!9;UBERON:0010009!2.89e-07!9;UBERON:0010011!2.89e-07!9;UBERON:0000454!2.89e-07!9;UBERON:0000025!4.39e-07!194;UBERON:0000200!4.85e-07!6;UBERON:0009663!9.52e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;2.93e-33;5!UBERON:0005388;2.93e-33;5!UBERON:0001802;2.93e-33;5!UBERON:0001781;5.17e-25;3!UBERON:0001782;5.17e-25;3!UBERON:0002104;1.17e-21;21!UBERON:0007029;3.25e-19;1!UBERON:0000941;3.25e-19;1!UBERON:0001785;3.25e-19;1!UBERON:0002464;3.25e-19;1!UBERON:0004904;3.25e-19;1!UBERON:0001021;3.25e-19;1!UBERON:0001032;5.63e-19;24!UBERON:0004456;5.63e-19;24!UBERON:0000970;6.42e-15;20!UBERON:0000020;5.07e-13;23!UBERON:0003714;2.72e-10;2!UBERON:0001875;2.72e-10;2!UBERON:0005162;2.72e-10;2!UBERON:0000122;2.72e-10;2!UBERON:0006514;2.72e-10;2!UBERON:0000019;2.93e-09;19!UBERON:0000047;2.93e-09;19!UBERON:0004088;2.93e-09;19!UBERON:0010230;2.93e-09;19!UBERON:0001456;1.97e-08;21!UBERON:0007625;1.59e-07;11!UBERON:0002240;2.79e-07;3!UBERON:0005174;2.79e-07;3!UBERON:0001137;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,2.88e-48,6;UBERON:0005388,2.88e-48,6;UBERON:0001802,2.88e-48,6;UBERON:0001781,7.56e-41,4;UBERON:0001782,7.02e-25,3;UBERON:0005424,7.02e-25,3;UBERON:0000970,1.27e-21,21;UBERON:0002104,1.27e-21,21;UBERON:0007029,2.25e-19,1;UBERON:0000941,2.71e-19,1;UBERON:0001785,2.71e-19,1;UBERON:0002464,2.71e-19,1;UBERON:0004904,2.71e-19,1;UBERON:0001021,2.71e-19,1;UBERON:0003902,2.71e-19,1;UBERON:0005425,2.71e-19,1;UBERON:0000020,6.07e-19,24;UBERON:0001032,6.07e-19,24;UBERON:0004456,6.07e-19,24;UBERON:0000019,7.97e-15,20;UBERON:0000047,7.97e-15,20;UBERON:0010312,7.97e-15,20;UBERON:0004088,7.97e-15,20;UBERON:0010230,7.97e-15,20;UBERON:0003072,7.97e-15,20;UBERON:0004128,7.97e-15,20;UBERON:0003071,7.97e-15,20;UBERON:0001456,1.64e-13,22;UBERON:0003714,2.49e-10,2;UBERON:0005162,2.49e-10,2;UBERON:0000122,2.49e-10,2;UBERON:0001875,3.27e-10,2;UBERON:0006514,3.27e-10,2;UBERON:0005085,1.10e-09,31;UBERON:0010371,4.54e-08,104;UBERON:0003075,1.17e-07,82;UBERON:0007284,1.17e-07,82;UBERON:0007625,1.73e-07,11;UBERON:0003056,2.42e-07,61;UBERON:0002346,2.70e-07,86;UBERON:0002240,2.97e-07,3;UBERON:0005174,2.97e-07,3;UBERON:0001137,2.97e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,1.8672662123986,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0.423863802319124,0,0.103052529238439,0,0,0,0,0,0.460249493211497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.358121926479791,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.384417447767103,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02580050046556,0.656029291399411,2.27764876265012,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.255679882248303,0.0890320356467374,0,0,0,0,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.719489830333259,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0.422008249231538,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0.808813595768125,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25980740780532,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0,1.20084057741958,0.273810757783986,0,3.43812353135966,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.364497339948148,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0.250381861413,0,0.776503360757966,0.745156835296601,0,0,0.454947352624943,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0.336749488765919,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.321146125482298,0,0,0,0.756215088665154,0.138314504928436,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.857440047187092,0.339848664884159,0.197318320688547,0,0,0,0.314231179832004,0,0.913158720509496,0,0,18.0120891325174,0,0.581207126840626,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0.517164979309476,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p13@NAV3 | |||
}} |
Revision as of 00:32, 11 September 2013
Short description: | p13@NAV3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_NAV3_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -20bp_to_ENST00000547725, ENST00000550503_5end |
EntrezGene: | NAV3 |
HGNC: | 15998 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 7.02e-25 | 3 |
follicular cell of ovary | 1.08e-19 | 1 |
granulosa cell | 1.08e-19 | 1 |
visual pigment cell | 6.18e-19 | 4 |
steroid hormone secreting cell | 1.93e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.