FFCP PHASE1:Hg19::chr11:65683410..65683420,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C186|description=CAGE_peak_at_chr11:65683410..65683420,+|id=chr11:65683410..65683420,+|ontology_enrichment_celltype=CL:0000066!2.49e-16!254;CL:0000076!2.24e-08!62;CL:0000063!5.72e-08!578;CL:0000548!5.06e-07!679;CL:0000004!5.06e-07!679;CL:0000255!5.06e-07!679;CL:0000012!7.28e-07!682|ontology_enrichment_celltype_v019=CL:0002097;1.12e-07;2!CL:0000054;1.75e-07;2!CL:0002593;1.75e-07;2!CL:0000137;1.75e-07;2!CL:0000092;1.75e-07;2|ontology_enrichment_celltype_v019_2=CL:0002097,1.20e-07,2;CL:0000054,1.54e-07,2;CL:0000137,1.54e-07,2;CL:0000092,1.54e-07,2;CL:0002593,2.12e-07,2;CL:0000076,7.84e-07,63|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!1.29e-09!106;DOID:0050687!6.03e-09!143;DOID:1749!7.70e-07!14|ontology_enrichment_disease_v019=DOID:4556;9.93e-18;3!DOID:3111;4.53e-14;1!DOID:3112;4.53e-14;1!DOID:3603;4.53e-14;1!DOID:0060085;1.10e-13;1!DOID:3165;1.10e-13;1!DOID:0060121;1.10e-13;1!DOID:2438;1.10e-13;1!DOID:4418;1.10e-13;1!DOID:3908;5.03e-11;5!DOID:201;3.56e-09;6!DOID:0060100;3.56e-09;6!DOID:1749;9.81e-09;14!DOID:1324;4.43e-08;15!DOID:0050615;1.32e-07;16!DOID:4231;1.75e-07;2!DOID:200;1.75e-07;2!DOID:4305;1.75e-07;2!DOID:4468;1.75e-07;2!DOID:1907;1.75e-07;2|ontology_enrichment_disease_v019_2=DOID:4556,1.39e-17,3;DOID:3112,3.98e-14,1;DOID:3111,4.53e-14,1;DOID:3603,4.53e-14,1;DOID:0060085,8.58e-14,1;DOID:3165,8.58e-14,1;DOID:0060121,8.58e-14,1;DOID:2438,8.58e-14,1;DOID:4418,8.58e-14,1;DOID:3908,6.15e-11,5;DOID:201,3.28e-09,6;DOID:0060100,3.28e-09,6;DOID:0050687,3.42e-09,143;DOID:1749,9.07e-09,14;DOID:305,1.48e-08,106;DOID:1324,4.54e-08,15;DOID:0050615,1.35e-07,16;DOID:200,1.54e-07,2;DOID:4305,1.54e-07,2;DOID:4231,1.75e-07,2;DOID:1907,1.75e-07,2;DOID:4468,2.40e-07,2;DOID:162,2.72e-07,235;DOID:14566,4.20e-07,239|ontology_enrichment_uberon=UBERON:0004119!7.22e-07!169;UBERON:0000925!7.22e-07!169;UBERON:0006595!7.22e-07!169|ontology_enrichment_uberon_v019=UBERON:0002456;1.75e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002456,2.12e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.245668634623536,0,1.18800285728205,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0.616964956219941,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460404944679482,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.255225424989168,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0.670302275535787,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0.23874448473769,0,0,0,0,0.333926115068718,0.16480387422676,0,0,0,0,1.53403023753232,0,0,0.988551862620595,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.05499032264014,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0.664653872707185,0,0.313932918407225,0,0,0.138674673013139,0,0,0.783532859223623,0,0,0,0,0,0,0,0,0.137041924646751,1.19228767021794,0,0.195551382734803,0.0801588202515337,0,0.19980960958213,0,0,0,0.576219191952599,1.49103042678519,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05600336519407,0,4.2221343410278,0,0,0,0,0,0,0,0,0.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr11:65683410..65683420,+ | |||
|id=chr11:65683410..65683420,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.49e-16!254;CL:0000076!2.24e-08!62;CL:0000063!5.72e-08!578;CL:0000548!5.06e-07!679;CL:0000004!5.06e-07!679;CL:0000255!5.06e-07!679;CL:0000012!7.28e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0002097;1.12e-07;2!CL:0000054;1.75e-07;2!CL:0002593;1.75e-07;2!CL:0000137;1.75e-07;2!CL:0000092;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,1.20e-07,2;CL:0000054,1.54e-07,2;CL:0000137,1.54e-07,2;CL:0000092,1.54e-07,2;CL:0002593,2.12e-07,2;CL:0000076,7.84e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.29e-09!106;DOID:0050687!6.03e-09!143;DOID:1749!7.70e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4556;9.93e-18;3!DOID:3111;4.53e-14;1!DOID:3112;4.53e-14;1!DOID:3603;4.53e-14;1!DOID:0060085;1.10e-13;1!DOID:3165;1.10e-13;1!DOID:0060121;1.10e-13;1!DOID:2438;1.10e-13;1!DOID:4418;1.10e-13;1!DOID:3908;5.03e-11;5!DOID:201;3.56e-09;6!DOID:0060100;3.56e-09;6!DOID:1749;9.81e-09;14!DOID:1324;4.43e-08;15!DOID:0050615;1.32e-07;16!DOID:4231;1.75e-07;2!DOID:200;1.75e-07;2!DOID:4305;1.75e-07;2!DOID:4468;1.75e-07;2!DOID:1907;1.75e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.39e-17,3;DOID:3112,3.98e-14,1;DOID:3111,4.53e-14,1;DOID:3603,4.53e-14,1;DOID:0060085,8.58e-14,1;DOID:3165,8.58e-14,1;DOID:0060121,8.58e-14,1;DOID:2438,8.58e-14,1;DOID:4418,8.58e-14,1;DOID:3908,6.15e-11,5;DOID:201,3.28e-09,6;DOID:0060100,3.28e-09,6;DOID:0050687,3.42e-09,143;DOID:1749,9.07e-09,14;DOID:305,1.48e-08,106;DOID:1324,4.54e-08,15;DOID:0050615,1.35e-07,16;DOID:200,1.54e-07,2;DOID:4305,1.54e-07,2;DOID:4231,1.75e-07,2;DOID:1907,1.75e-07,2;DOID:4468,2.40e-07,2;DOID:162,2.72e-07,235;DOID:14566,4.20e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.22e-07!169;UBERON:0000925!7.22e-07!169;UBERON:0006595!7.22e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,2.12e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0.225222960966644,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0.245668634623536,0,1.18800285728205,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0.616964956219941,0.300343057843917,0,0.112131084345361,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460404944679482,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.255225424989168,0,0,0.94443704049192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0.670302275535787,0,0,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852408440419239,0.23874448473769,0,0,0,0,0.333926115068718,0.16480387422676,0,0,0,0,1.53403023753232,0,0,0.988551862620595,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.05499032264014,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0.664653872707185,0,0.313932918407225,0,0,0.138674673013139,0,0,0.783532859223623,0,0,0,0,0,0,0,0,0.137041924646751,1.19228767021794,0,0.195551382734803,0.0801588202515337,0,0.19980960958213,0,0,0,0.576219191952599,1.49103042678519,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05600336519407,0,4.2221343410278,0,0,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,2.11881813448034,0,0.260994291965212,0.226705925512272,0,0,0,0,0,1.06013487567529,0,0,0,0.345430341731199,0,0,0,0,0,0,0,2.3244333569449,0,0,0,1.13503190713367,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,0,0.231051332300676,0,0.690359926060101,0,0,0,0,0,2.45657876265145,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.709163045303809,0.111231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0.111855431797792,0.392600934460972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,12.3513205100492,1.44434460040503,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:65683410..65683420,+ | |||
}} |
Revision as of 19:03, 10 September 2013
Short description: | p@chr11:65683410..65683420, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:65683410..65683420, + |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 1.20e-07 | 2 |
bone matrix secreting cell | 1.54e-07 | 2 |
osteocyte | 1.54e-07 | 2 |
osteoclast | 1.54e-07 | 2 |
smooth muscle cell of the internal thoracic artery | 2.12e-07 | 2 |
squamous epithelial cell | 7.84e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.39e-17 | 3 |
papillary adenocarcinoma | 3.98e-14 | 1 |
cystadenocarcinoma | 4.53e-14 | 1 |
mucinous cystadenocarcinoma | 4.53e-14 | 1 |
organ system benign neoplasm | 8.58e-14 | 1 |
skin benign neoplasm | 8.58e-14 | 1 |
integumentary system benign neoplasm | 8.58e-14 | 1 |
dermis tumor | 8.58e-14 | 1 |
cutaneous fibrous histiocytoma | 8.58e-14 | 1 |
non-small cell lung carcinoma | 6.15e-11 | 5 |
connective tissue cancer | 3.28e-09 | 6 |
musculoskeletal system cancer | 3.28e-09 | 6 |
cell type cancer | 3.42e-09 | 143 |
squamous cell carcinoma | 9.07e-09 | 14 |
carcinoma | 1.48e-08 | 106 |
lung cancer | 4.54e-08 | 15 |
respiratory system cancer | 1.35e-07 | 16 |
giant cell tumor | 1.54e-07 | 2 |
bone giant cell tumor | 1.54e-07 | 2 |
histiocytoma | 1.75e-07 | 2 |
malignant fibroxanthoma | 1.75e-07 | 2 |
clear cell adenocarcinoma | 2.40e-07 | 2 |
cancer | 2.72e-07 | 235 |
disease of cellular proliferation | 4.20e-07 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.