FFCP PHASE1:Hg19::chr11:65307347..65307372,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:65307347..65307372,-|id=chr11:65307347..65307372,-|ontology_enrichment_celltype=CL:0000066!3.81e-16!254;CL:0002076!2.43e-14!43;CL:0002368!2.93e-13!13;CL:0002202!1.66e-10!9;CL:0002632!1.66e-10!9;CL:0000223!8.33e-09!59;CL:0000240!1.27e-07!6;CL:0000311!1.27e-07!6;CL:0000079!1.27e-07!6;CL:0000237!1.27e-07!6;CL:0000036!1.27e-07!6;CL:0000357!1.27e-07!6;CL:0000114!1.27e-07!6;CL:0002322!8.07e-07!5|ontology_enrichment_celltype_v019=CL:0002202;1.44e-11;9!CL:0002632;1.44e-11;9!CL:0002368;2.63e-10;13!CL:0002577;1.91e-09;3!CL:0002322;2.18e-09;5!CL:0002328;2.25e-09;3!CL:0002076;4.76e-09;42!CL:0000240;3.97e-08;6!CL:0000311;3.97e-08;6!CL:0000079;3.97e-08;6!CL:0000237;3.97e-08;6!CL:0000575;3.65e-07;2!CL:0002159;3.81e-07;14!CL:0000082;5.58e-07;19!CL:0002535;6.36e-07;2|ontology_enrichment_celltype_v019_2=CL:0000066,2.93e-17,253;CL:0002076,2.48e-12,42;CL:0002202,1.02e-11,9;CL:0002632,1.02e-11,9;CL:0002368,2.05e-10,13;CL:0002328,1.17e-09,3;CL:0002322,1.33e-09,5;CL:0002577,1.48e-09,3;CL:0000240,5.09e-08,6;CL:0000311,5.09e-08,6;CL:0000079,5.09e-08,6;CL:0000237,5.09e-08,6;CL:0000036,5.09e-08,6;CL:0000357,5.09e-08,6;CL:0000114,5.09e-08,6;CL:0000223,5.80e-08,58;CL:0000575,3.95e-07,2;CL:0002159,4.51e-07,14;CL:0000082,4.53e-07,19;CL:0002535,5.18e-07,2;CL:0002077,7.60e-07,34|ontology_enrichment_development_v019=CL:0000357;3.97e-08;6!CL:0000114;3.97e-08;6|ontology_enrichment_disease=DOID:305!6.93e-07!106|ontology_enrichment_disease_v019=DOID:5093;6.04e-07;4!DOID:1612;6.04e-07;4|ontology_enrichment_disease_v019_2=DOID:305,4.33e-10,106;DOID:5093,5.11e-07,4;DOID:1612,5.11e-07,4;DOID:0050687,8.43e-07,143|ontology_enrichment_uberon=UBERON:0000464!4.78e-10!104;UBERON:0004119!5.98e-10!169;UBERON:0000925!5.98e-10!169;UBERON:0006595!5.98e-10!169;UBERON:0007196!1.51e-08!14;UBERON:0001558!1.51e-08!14;UBERON:0000064!9.99e-08!219;UBERON:0000062!1.05e-07!511;UBERON:0000466!1.54e-07!126;UBERON:0005156!1.94e-07!59;UBERON:0000990!1.94e-07!59;UBERON:0005631!2.57e-07!14;UBERON:0000158!2.57e-07!14;UBERON:0000468!5.39e-07!659;UBERON:0003135!7.19e-07!11;UBERON:0003101!7.45e-07!22;UBERON:0000079!7.45e-07!22|ontology_enrichment_uberon_v019=UBERON:0004815;2.25e-09;3!UBERON:0002031;2.25e-09;3!UBERON:0005178;1.16e-07;34!UBERON:0002224;1.16e-07;34!UBERON:0004807;1.62e-07;22!UBERON:0005181;1.78e-07;35!UBERON:0000964;3.05e-07;4!UBERON:0010409;3.05e-07;4!UBERON:0001987;3.55e-07;4!UBERON:0004802;5.58e-07;19!UBERON:0000115;5.58e-07;19!UBERON:0006955;6.36e-07;2!UBERON:0004801;6.36e-07;2!UBERON:0006562;9.48e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.17e-09,3;UBERON:0002031,1.17e-09,3;UBERON:0005631,2.32e-09,14;UBERON:0000158,2.32e-09,14;UBERON:0005178,1.56e-08,34;UBERON:0002224,1.56e-08,34;UBERON:0005181,3.19e-08,35;UBERON:0000915,4.81e-08,52;UBERON:0005157,8.83e-08,47;UBERON:0001987,2.93e-07,4;UBERON:0004340,2.93e-07,4;UBERON:0004119,3.27e-07,160;UBERON:0000925,3.27e-07,160;UBERON:0006595,3.27e-07,160;UBERON:0000964,4.31e-07,4;UBERON:0010409,4.31e-07,4;UBERON:0004348,4.31e-07,4;UBERON:0005427,4.31e-07,4;UBERON:0004802,4.53e-07,19;UBERON:0000115,4.53e-07,19;UBERON:0006955,5.18e-07,2;UBERON:0004801,5.18e-07,2;UBERON:0003124,9.06e-07,7;UBERON:0007196,9.95e-07,15;UBERON:0001558,9.95e-07,15|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,2.79120467188971,0,1.05506791291381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.35536979583142,1.8072355126695,1.84877005083394,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,2.5500670180478,5.19098219898201,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48875241714027,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0.355009592516614,0.10075209822764,0,1.15956511897978,0.545492241181669,0.286804595389004,2.5614478287215,1.85541675650079,1.85910308591229,0.725627385107593,3.02785021050754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09750285408626,5.62008766288098,0.904760751704678,1.29623823221941,0,1.03993478527958,0,0,0.117408694235822,0,0,0,1.58040879591855,3.43394464837949,0,0,0.445893486866185,0,0,0.992425680696705,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,22.1283127155769,1.66435439510497,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.40101294060657,1.74953878978203,0,0,0,0,0.15403067420883,0.78434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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:65307347..65307372,- | |||
|id=chr11:65307347..65307372,- | |||
|ontology_enrichment_celltype=CL:0000066!3.81e-16!254;CL:0002076!2.43e-14!43;CL:0002368!2.93e-13!13;CL:0002202!1.66e-10!9;CL:0002632!1.66e-10!9;CL:0000223!8.33e-09!59;CL:0000240!1.27e-07!6;CL:0000311!1.27e-07!6;CL:0000079!1.27e-07!6;CL:0000237!1.27e-07!6;CL:0000036!1.27e-07!6;CL:0000357!1.27e-07!6;CL:0000114!1.27e-07!6;CL:0002322!8.07e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002202;1.44e-11;9!CL:0002632;1.44e-11;9!CL:0002368;2.63e-10;13!CL:0002577;1.91e-09;3!CL:0002322;2.18e-09;5!CL:0002328;2.25e-09;3!CL:0002076;4.76e-09;42!CL:0000240;3.97e-08;6!CL:0000311;3.97e-08;6!CL:0000079;3.97e-08;6!CL:0000237;3.97e-08;6!CL:0000575;3.65e-07;2!CL:0002159;3.81e-07;14!CL:0000082;5.58e-07;19!CL:0002535;6.36e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.93e-17,253;CL:0002076,2.48e-12,42;CL:0002202,1.02e-11,9;CL:0002632,1.02e-11,9;CL:0002368,2.05e-10,13;CL:0002328,1.17e-09,3;CL:0002322,1.33e-09,5;CL:0002577,1.48e-09,3;CL:0000240,5.09e-08,6;CL:0000311,5.09e-08,6;CL:0000079,5.09e-08,6;CL:0000237,5.09e-08,6;CL:0000036,5.09e-08,6;CL:0000357,5.09e-08,6;CL:0000114,5.09e-08,6;CL:0000223,5.80e-08,58;CL:0000575,3.95e-07,2;CL:0002159,4.51e-07,14;CL:0000082,4.53e-07,19;CL:0002535,5.18e-07,2;CL:0002077,7.60e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;3.97e-08;6!CL:0000114;3.97e-08;6 | |||
|ontology_enrichment_disease=DOID:305!6.93e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:5093;6.04e-07;4!DOID:1612;6.04e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.33e-10,106;DOID:5093,5.11e-07,4;DOID:1612,5.11e-07,4;DOID:0050687,8.43e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000464!4.78e-10!104;UBERON:0004119!5.98e-10!169;UBERON:0000925!5.98e-10!169;UBERON:0006595!5.98e-10!169;UBERON:0007196!1.51e-08!14;UBERON:0001558!1.51e-08!14;UBERON:0000064!9.99e-08!219;UBERON:0000062!1.05e-07!511;UBERON:0000466!1.54e-07!126;UBERON:0005156!1.94e-07!59;UBERON:0000990!1.94e-07!59;UBERON:0005631!2.57e-07!14;UBERON:0000158!2.57e-07!14;UBERON:0000468!5.39e-07!659;UBERON:0003135!7.19e-07!11;UBERON:0003101!7.45e-07!22;UBERON:0000079!7.45e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;2.25e-09;3!UBERON:0002031;2.25e-09;3!UBERON:0005178;1.16e-07;34!UBERON:0002224;1.16e-07;34!UBERON:0004807;1.62e-07;22!UBERON:0005181;1.78e-07;35!UBERON:0000964;3.05e-07;4!UBERON:0010409;3.05e-07;4!UBERON:0001987;3.55e-07;4!UBERON:0004802;5.58e-07;19!UBERON:0000115;5.58e-07;19!UBERON:0006955;6.36e-07;2!UBERON:0004801;6.36e-07;2!UBERON:0006562;9.48e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.17e-09,3;UBERON:0002031,1.17e-09,3;UBERON:0005631,2.32e-09,14;UBERON:0000158,2.32e-09,14;UBERON:0005178,1.56e-08,34;UBERON:0002224,1.56e-08,34;UBERON:0005181,3.19e-08,35;UBERON:0000915,4.81e-08,52;UBERON:0005157,8.83e-08,47;UBERON:0001987,2.93e-07,4;UBERON:0004340,2.93e-07,4;UBERON:0004119,3.27e-07,160;UBERON:0000925,3.27e-07,160;UBERON:0006595,3.27e-07,160;UBERON:0000964,4.31e-07,4;UBERON:0010409,4.31e-07,4;UBERON:0004348,4.31e-07,4;UBERON:0005427,4.31e-07,4;UBERON:0004802,4.53e-07,19;UBERON:0000115,4.53e-07,19;UBERON:0006955,5.18e-07,2;UBERON:0004801,5.18e-07,2;UBERON:0003124,9.06e-07,7;UBERON:0007196,9.95e-07,15;UBERON:0001558,9.95e-07,15 | |||
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|short_description=p@chr11:65307347..65307372,- | |||
}} |
Revision as of 18:58, 10 September 2013
Short description: | p@chr11:65307347..65307372, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:65307347..65307372, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.93e-17 | 253 |
endo-epithelial cell | 2.48e-12 | 42 |
epithelial cell of tracheobronchial tree | 1.02e-11 | 9 |
epithelial cell of lower respiratory tract | 1.02e-11 | 9 |
respiratory epithelial cell | 2.05e-10 | 13 |
bronchial epithelial cell | 1.17e-09 | 3 |
embryonic stem cell | 1.33e-09 | 5 |
placental epithelial cell | 1.48e-09 | 3 |
stratified squamous epithelial cell | 5.09e-08 | 6 |
keratin accumulating cell | 5.09e-08 | 6 |
stratified epithelial cell | 5.09e-08 | 6 |
keratinizing barrier epithelial cell | 5.09e-08 | 6 |
epithelial fate stem cell | 5.09e-08 | 6 |
stratified epithelial stem cell | 5.09e-08 | 6 |
surface ectodermal cell | 5.09e-08 | 6 |
endodermal cell | 5.80e-08 | 58 |
corneal epithelial cell | 3.95e-07 | 2 |
general ecto-epithelial cell | 4.51e-07 | 14 |
epithelial cell of lung | 4.53e-07 | 19 |
epithelial cell of cervix | 5.18e-07 | 2 |
ecto-epithelial cell | 7.60e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.17e-09 | 3 |
epithelium of bronchus | 1.17e-09 | 3 |
extraembryonic membrane | 2.32e-09 | 14 |
membranous layer | 2.32e-09 | 14 |
thoracic cavity element | 1.56e-08 | 34 |
thoracic cavity | 1.56e-08 | 34 |
thoracic segment organ | 3.19e-08 | 35 |
thoracic segment of trunk | 4.81e-08 | 52 |
epithelial fold | 8.83e-08 | 47 |
placenta | 2.93e-07 | 4 |
allantois | 2.93e-07 | 4 |
endoderm-derived structure | 3.27e-07 | 160 |
endoderm | 3.27e-07 | 160 |
presumptive endoderm | 3.27e-07 | 160 |
cornea | 4.31e-07 | 4 |
eye surface | 4.31e-07 | 4 |
optic eminence | 4.31e-07 | 4 |
corneal primordium | 4.31e-07 | 4 |
respiratory tract epithelium | 4.53e-07 | 19 |
lung epithelium | 4.53e-07 | 19 |
uterine epithelium | 5.18e-07 | 2 |
cervix epithelium | 5.18e-07 | 2 |
chorion | 9.06e-07 | 7 |
tracheobronchial tree | 9.95e-07 | 15 |
lower respiratory tract | 9.95e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.33e-10 | 106 |
thoracic cancer | 5.11e-07 | 4 |
breast cancer | 5.11e-07 | 4 |
cell type cancer | 8.43e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.