FFCP PHASE1:Hg19::chr11:60623437..60623460,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=11251|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4502|TSSclassifier=S|UniProt=Q9Y5Y4|association_with_transcript=0bp_to_ENST00000332539,NM_004778,uc001nqc.2_5end|coexpression_cluster_id=C3168|description=CAGE_peak_2_at_PTGDR2_5end|id=chr11:60623437..60623460,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000875;5.85e-07;3!CL:0002396;5.85e-07;3|ontology_enrichment_celltype_v019_2=CL:0002393,4.74e-07,9;CL:0002397,4.74e-07,9;CL:0000875,5.77e-07,3;CL:0002396,5.77e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.95e-26!115;UBERON:0002616!5.00e-10!59;UBERON:0001049!1.34e-08!57;UBERON:0005068!1.34e-08!57;UBERON:0006241!1.34e-08!57;UBERON:0007135!1.34e-08!57;UBERON:0000178!1.86e-08!15;UBERON:0000179!1.86e-08!15;UBERON:0000463!1.86e-08!15;UBERON:0000955!1.20e-07!69;UBERON:0006238!1.20e-07!69;UBERON:0001893!2.10e-07!34;UBERON:0001017!2.19e-07!82;UBERON:0002619!2.43e-07!22;UBERON:0002020!3.05e-07!34;UBERON:0003528!3.05e-07!34;UBERON:0003080!4.04e-07!42;UBERON:0002791!6.23e-07!33;UBERON:0005743!7.05e-07!86;UBERON:0001869!9.14e-07!32|ontology_enrichment_uberon_v019=UBERON:0000178;1.07e-15;15!UBERON:0000179;1.07e-15;15!UBERON:0000463;1.07e-15;15!UBERON:0011135;8.69e-10;5!UBERON:0002216;8.69e-10;5!UBERON:0011134;8.69e-10;5!UBERON:0002209;8.69e-10;5!UBERON:0002213;8.69e-10;5!UBERON:0007844;8.69e-10;5!UBERON:0011138;8.69e-10;5!UBERON:0001130;8.69e-10;5!UBERON:0001066;8.69e-10;5!UBERON:0001468;8.69e-10;5!UBERON:0000160;1.85e-07;17!UBERON:0002390;2.49e-07;32!UBERON:0000059;8.37e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.10e-15,15;UBERON:0000179,1.10e-15,15;UBERON:0000463,1.10e-15,15;UBERON:0011135,1.07e-09,5;UBERON:0002216,1.07e-09,5;UBERON:0011134,1.07e-09,5;UBERON:0002209,1.07e-09,5;UBERON:0002213,1.07e-09,5;UBERON:0005856,1.07e-09,5;UBERON:0005866,1.07e-09,5;UBERON:0005863,1.07e-09,5;UBERON:0007844,1.07e-09,5;UBERON:0011138,1.07e-09,5;UBERON:0001130,1.07e-09,5;UBERON:0001066,1.07e-09,5;UBERON:0001468,1.07e-09,5;UBERON:0007023,1.06e-08,114;UBERON:0000160,2.57e-07,17|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,14.1093642374453,6.95934489028623,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0,0,18.0947567350496,0.767658796194425,0.619264493264304,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0.581592955118259,0.377875943688809,0.485168122375632,0.697287110717054,0.411167888021826,0,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0.217188844705117,0,0,0,4.64761629886272,4.25208599930087,1.46761051855863,0,0,0,20.8059302931111,23.6710845866917,14.4304681474061,0,0.546138611262131,0,0,0,0,1.32208974556972,0,0.569212969109448,0,0,2.64342657158052,0.560508562981536,0.526768169550154,0,0.393010762749165,1.85041349099558,0.167186495390678,0,0,0,53.5884297617685,1.76763544484902,1.99380505125259,1.08321545506006,14.3462278092756,30.6940060241313,4.60426132890293,4.97430032014527,1.15921234294021,0.14828656316206,0,0,4.19244567980995,0,0,0,2.86708872891687,1.30216690771284,0,1.6563263098555,1.66382594500744,1.24930726552346,0.473554504088034,3.28451198768419,0.80642697289893,0,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0,0.654895377488563,0,0,0,0,0,0.476981248610684,1.14398982156026,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,9.53551794163068,16.13292588544,0.234321431833797,0,0,0.448346041655403,0.352303495931295,0.971237666208789,0.280901613404497,0.816616685019573,0.245668634623536,1.44656093646072,0,0,0,0,0.841680569770331,0.375355559615893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,1.28648187638577,0,1.39310378409594,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0,0,0,0,0,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.880484340132261,7.67114027500857,7.49423757768199,5.93339437103986,0,0,0,0,0,0,0,3.81245686774226,0,0.8800594298514,0,14.3062578340753,0,0,0,0.257207374262142,0,0.799266537048298,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0.254094624222463,0,0,0,0,4.49404214368309,14.9580729602012,2.90090859405225,2.08575535922538,24.0081850108645,10.30807090059,0,0,0,0,0,0,2.0694614258501,0,0.737476674166813,0.173767228936166,46.796476633595,25.3926133620033,2.06768026122887,3.01999881146064,1.60091336705167,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.328508624055237,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.877039506583738,2.87578996127391,0,0,0,0.309123034943167,0,0,0,0,0,0.193341436584244,0.616194468458578,1.07452572308291,0,2.2558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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=11251 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4502 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y5Y4 | |||
|association_with_transcript=0bp_to_ENST00000332539,NM_004778,uc001nqc.2_5end | |||
|coexpression_cluster_id=C3168 | |||
|description=CAGE_peak_2_at_PTGDR2_5end | |||
|id=chr11:60623437..60623460,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000875;5.85e-07;3!CL:0002396;5.85e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,4.74e-07,9;CL:0002397,4.74e-07,9;CL:0000875,5.77e-07,3;CL:0002396,5.77e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.95e-26!115;UBERON:0002616!5.00e-10!59;UBERON:0001049!1.34e-08!57;UBERON:0005068!1.34e-08!57;UBERON:0006241!1.34e-08!57;UBERON:0007135!1.34e-08!57;UBERON:0000178!1.86e-08!15;UBERON:0000179!1.86e-08!15;UBERON:0000463!1.86e-08!15;UBERON:0000955!1.20e-07!69;UBERON:0006238!1.20e-07!69;UBERON:0001893!2.10e-07!34;UBERON:0001017!2.19e-07!82;UBERON:0002619!2.43e-07!22;UBERON:0002020!3.05e-07!34;UBERON:0003528!3.05e-07!34;UBERON:0003080!4.04e-07!42;UBERON:0002791!6.23e-07!33;UBERON:0005743!7.05e-07!86;UBERON:0001869!9.14e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.07e-15;15!UBERON:0000179;1.07e-15;15!UBERON:0000463;1.07e-15;15!UBERON:0011135;8.69e-10;5!UBERON:0002216;8.69e-10;5!UBERON:0011134;8.69e-10;5!UBERON:0002209;8.69e-10;5!UBERON:0002213;8.69e-10;5!UBERON:0007844;8.69e-10;5!UBERON:0011138;8.69e-10;5!UBERON:0001130;8.69e-10;5!UBERON:0001066;8.69e-10;5!UBERON:0001468;8.69e-10;5!UBERON:0000160;1.85e-07;17!UBERON:0002390;2.49e-07;32!UBERON:0000059;8.37e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.10e-15,15;UBERON:0000179,1.10e-15,15;UBERON:0000463,1.10e-15,15;UBERON:0011135,1.07e-09,5;UBERON:0002216,1.07e-09,5;UBERON:0011134,1.07e-09,5;UBERON:0002209,1.07e-09,5;UBERON:0002213,1.07e-09,5;UBERON:0005856,1.07e-09,5;UBERON:0005866,1.07e-09,5;UBERON:0005863,1.07e-09,5;UBERON:0007844,1.07e-09,5;UBERON:0011138,1.07e-09,5;UBERON:0001130,1.07e-09,5;UBERON:0001066,1.07e-09,5;UBERON:0001468,1.07e-09,5;UBERON:0007023,1.06e-08,114;UBERON:0000160,2.57e-07,17 | |||
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| |||
|short_description=p2@PTGDR2 | |||
}} |
Revision as of 18:19, 10 September 2013
Short description: | p2@PTGDR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PTGDR2_5end |
Coexpression cluster: | C3168_CD4_Pericytes_Neutrophils_Nucleus_Whole_CD14CD16_Fibroblast |
Association with transcript: | 0bp_to_ENST00000332539, NM_004778, uc001nqc.2_5end |
EntrezGene: | PTGDR2 |
HGNC: | 4502 |
UniProt: | Q9Y5Y4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 4.74e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.74e-07 | 9 |
non-classical monocyte | 5.77e-07 | 3 |
CD14-low, CD16-positive monocyte | 5.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.10e-15 | 15 |
haemolymphatic fluid | 1.10e-15 | 15 |
organism substance | 1.10e-15 | 15 |
intervertebral cartilage | 1.07e-09 | 5 |
symphysis | 1.07e-09 | 5 |
nonsynovial joint | 1.07e-09 | 5 |
fibrous joint | 1.07e-09 | 5 |
cartilaginous joint | 1.07e-09 | 5 |
developing mesenchymal condensation | 1.07e-09 | 5 |
pre-cartilage condensation | 1.07e-09 | 5 |
cartilaginous condensation | 1.07e-09 | 5 |
cartilage element | 1.07e-09 | 5 |
post-cranial axial skeletal system | 1.07e-09 | 5 |
vertebral column | 1.07e-09 | 5 |
intervertebral disk | 1.07e-09 | 5 |
intervertebral joint | 1.07e-09 | 5 |
adult organism | 1.06e-08 | 114 |
intestine | 2.57e-07 | 17 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.