FFCP PHASE1:Hg19::chr11:58874689..58874700,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=374393|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24200|TSSclassifier=S|UniProt=|association_with_transcript=-8bp_to_ENST00000528234,ENST00000529618_5end|coexpression_cluster_id=C3163|description=CAGE_peak_3_at_FAM111B_5end|id=chr11:58874689..58874700,+|ontology_enrichment_celltype=CL:0002319!2.26e-11!25;CL:0000066!4.47e-10!254;CL:0000133!4.26e-07!59;CL:0000095!5.54e-07!17;CL:0000123!5.54e-07!17|ontology_enrichment_celltype_v019=CL:0002319;5.82e-14;25!CL:0002322;1.31e-07;5!CL:0000095;2.75e-07;17|ontology_enrichment_celltype_v019_2=CL:0002319,7.12e-14,25;CL:0000047,6.22e-09,8;CL:0002322,4.70e-08,5;CL:0000133,6.18e-08,59;CL:0000095,2.15e-07,17;CL:0000123,2.15e-07,17|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!8.42e-27!235;DOID:14566!1.26e-26!239;DOID:0050687!3.82e-23!143;DOID:305!9.61e-20!106;DOID:0050686!8.78e-07!137|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:162,1.80e-20,235;DOID:14566,1.43e-19,239;DOID:0050687,2.74e-14,143;DOID:305,2.97e-14,106|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001737;1.24e-08;9!UBERON:0001557;1.24e-08;9|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.04e-08,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0,0.85870796139317,1.36874425072884,1.88313959392204,2.8272960126742,3.03772180964799,3.30585281517453,0,0,0,0.919421224478927,0,0,2.71135202031056,0.853015394924529,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,1.72425731986345,0,0.954053754535364,0,0.587237189370939,0.382273228125229,0,0,0.790152254325231,0,0,0.205601498999509,0,0,0,0,0.668462741311041,0.294605907474837,0,0,0.896639238079726,0.260118695119756,1.15106533222573,0.552700035571697,1.73881851441031,0,0,0,1.69964014046349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0.722878304769133,0,0.144846518960824,0,0,0.661743720148475,0.443458794925128,0.702678285545008,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0.33472061276467,0,0,0,0,0,2.32179293538607,0.22452937262617,0.900891843866578,0,0.949265659568129,0,0,0,0,0,0.379891534993739,0,0.573673241497627,0.709336764396714,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0.822041490506354,0.809364721840658,0.842704840213491,0,1.10550885580591,0,0,0.247266929278557,0,0,2.35670559535693,1.37630371859161,1.38532057742091,0,0,0,0.340296549480063,2.33206526395521,0,0.635795703478686,1.20036438433761,0.206105058476878,0.772921620136887,0,1.68776332241266,0.389748020644795,1.26216887122057,0.0920498986422993,0.161646056818812,0,0.403008392910561,0.169560592310488,0.57978255948989,0.545492241181669,0.286804595389004,2.5614478287215,2.65059536642971,1.62671520017326,1.34759371519982,1.7662459561294,2.18986415445498,0,0,0,0,0,1.0647612003586,1.85443159085912,0.964044119533928,1.7647035637183,1.30727666455444,1.18635309555548,1.48314438976181,1.76599318612811,1.15424147083917,0,0,0,0,0,0,0,0,0.737930631258681,0.514703430895577,0,0,1.10581869652794,0.370353780634118,0,0,1.44331342025273,0.231860809950154,0.117408694235822,0.577465791044295,0,0.761016608938393,0,0.858486162094873,0.738651018262192,0.234004265139238,0.445893486866185,0,0,0.992425680696705,0.268675568108545,1.45316969256981,0,0,0.176096868026452,0,0,0,2.85740524314761,0,0,0,2.46785982487976,0.600686115687835,0,0.224262168690721,0,3.0802080044799,0,0,0,0,0,0.771622122786426,1.41849132023278,0.532844358032199,0.142977993658148,0,0,0.65147236858747,0.355391948742546,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0.716243852959582,0.896681151948218,0,0,0,3.30323011489202,1.30139853857622,0.773288812777695,1.17261385734044,1.27587750330633,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0.664225598535437,0,0.260650843404249,0,0,0.206768026122887,0,0.106727557803444,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0.462629081407967,0.177561725313127,0.821271560138091,0,0.232420756919918,1.69203229428271,0.200506470303285,0,0.229628896329213,0.364182336013434,0,0,0.924184045252977,0,0,1.05551628892876,0,0.170093705276516,0.863663664408557,0,0,0,0.509752546090077,0,0,0.219259876645935,0,0.769350375349168,0,0.325378394664303,0,2.38080608527693,3.63041799650587,0,0,0,0.193341436584244,0.308097234229289,1.07452572308291,1.37836572484531,0.537101224341368,0.145016693914229,0.93749290157711,0.356128142586949,0,0,0.638063562472921,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0,0.255897791311334,0,0,0,0.359744915166629,0.274537029736055,0.353437207037059,0,0,0.421258456238981,0,0,0,0.545999645631943,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,1.00387946542836,0.0982490410131212,0,1.06428319221179,0,0,0,0,0.0962221127255121,0,0,0,0,0,0.443430153536676,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=374393 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24200 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-8bp_to_ENST00000528234,ENST00000529618_5end | |||
|coexpression_cluster_id=C3163 | |||
|description=CAGE_peak_3_at_FAM111B_5end | |||
|id=chr11:58874689..58874700,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.26e-11!25;CL:0000066!4.47e-10!254;CL:0000133!4.26e-07!59;CL:0000095!5.54e-07!17;CL:0000123!5.54e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0002319;5.82e-14;25!CL:0002322;1.31e-07;5!CL:0000095;2.75e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.12e-14,25;CL:0000047,6.22e-09,8;CL:0002322,4.70e-08,5;CL:0000133,6.18e-08,59;CL:0000095,2.15e-07,17;CL:0000123,2.15e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!8.42e-27!235;DOID:14566!1.26e-26!239;DOID:0050687!3.82e-23!143;DOID:305!9.61e-20!106;DOID:0050686!8.78e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.80e-20,235;DOID:14566,1.43e-19,239;DOID:0050687,2.74e-14,143;DOID:305,2.97e-14,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.24e-08;9!UBERON:0001557;1.24e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.04e-08,9 | |||
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| |||
|short_description=p3@FAM111B | |||
}} |
Revision as of 18:14, 10 September 2013
Short description: | p3@FAM111B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FAM111B_5end |
Coexpression cluster: | C3163_lymphoma_acute_epidermoid_small_signet_gall_Burkitt |
Association with transcript: | -8bp_to_ENST00000528234, ENST00000529618_5end |
EntrezGene: | FAM111B |
HGNC: | 24200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.12e-14 | 25 |
neuronal stem cell | 6.22e-09 | 8 |
embryonic stem cell | 4.70e-08 | 5 |
neurectodermal cell | 6.18e-08 | 59 |
neuron associated cell | 2.15e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 2.15e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.80e-20 | 235 |
disease of cellular proliferation | 1.43e-19 | 239 |
cell type cancer | 2.74e-14 | 143 |
carcinoma | 2.97e-14 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.