FFCP PHASE1:Hg19::chr11:47470703..47470715,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5913|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9863|TSSclassifier=S|UniProt=|association_with_transcript=-8bp_to_ENST00000352508_5end|coexpression_cluster_id=C737|description=CAGE_peak_3_at_RAPSN_5end|id=chr11:47470703..47470715,-|ontology_enrichment_celltype=CL:0000188!1.33e-21!9;CL:0000515!1.32e-13!4;CL:0000242!2.72e-07!2;CL:0002575!3.08e-07!2|ontology_enrichment_celltype_v019=CL:0000056;8.49e-35;4!CL:0000680;1.43e-30;7!CL:0000515;1.98e-26;3!CL:0000188;4.31e-24;9!CL:0000228;3.71e-10;1!CL:0002372;3.71e-10;1!CL:0002321;1.83e-09;15|ontology_enrichment_celltype_v019_2=CL:0000515,8.13e-35,4;CL:0000188,5.23e-24,9;CL:0000228,3.71e-10,1;CL:0002372,3.71e-10,1;CL:0000680,1.55e-08,58;CL:0000056,1.55e-08,58;CL:0000355,1.55e-08,58|ontology_enrichment_development_v019=CL:0000515;8.49e-35;4!UBERON:0000358;5.54e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.10e-15!115;UBERON:0001134!1.55e-09!61;UBERON:0002036!1.55e-09!61;UBERON:0003082!1.55e-09!61;UBERON:0002385!4.13e-09!63;UBERON:0001015!4.13e-09!63;UBERON:0000383!4.13e-09!63;UBERON:0004290!8.02e-08!70;UBERON:0000475!1.42e-07!365;UBERON:0000341!1.50e-07!2;UBERON:0001630!1.54e-07!2;UBERON:0005090!1.54e-07!2;UBERON:0003127!5.85e-07!2|ontology_enrichment_uberon_v019=UBERON:0001134;5.03e-64;16!UBERON:0002036;5.03e-64;16!UBERON:0002385;1.25e-31;31!UBERON:0001015;1.25e-31;31!UBERON:0000383;1.25e-31;31!UBERON:0000341;5.34e-18;2!UBERON:0001723;1.78e-12;3!UBERON:0001033;1.78e-12;3!UBERON:0001389;2.84e-10;1!UBERON:0000026;2.84e-10;1!UBERON:0008784;2.84e-10;1!UBERON:0006058;2.84e-10;1!UBERON:0003663;2.84e-10;1!UBERON:0004256;2.84e-10;1!UBERON:0004708;2.84e-10;1!UBERON:0002101;2.84e-10;1!UBERON:0004709;2.84e-10;1!UBERON:0002529;2.84e-10;1!UBERON:0010538;2.84e-10;1!UBERON:0003661;2.84e-10;1!UBERON:0010890;2.84e-10;1!UBERON:0002471;2.84e-10;1!UBERON:0001383;2.84e-10;1!UBERON:0010758;2.84e-10;1!UBERON:0010707;2.84e-10;1!UBERON:0000978;2.84e-10;1!UBERON:0002103;2.84e-10;1!UBERON:0001665;2.84e-10;1!UBERON:0003823;2.84e-10;1!UBERON:0000154;2.84e-10;1!UBERON:0010709;2.84e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0000341,4.48e-18,2;UBERON:0001134,3.00e-15,62;UBERON:0002036,3.00e-15,62;UBERON:0003082,3.00e-15,62;UBERON:0002385,1.02e-14,64;UBERON:0001015,1.02e-14,64;UBERON:0000383,1.02e-14,64;UBERON:0002329,4.30e-13,71;UBERON:0003059,4.30e-13,71;UBERON:0007282,4.30e-13,71;UBERON:0004290,4.30e-13,71;UBERON:0009618,4.30e-13,71;UBERON:0003077,6.92e-13,72;UBERON:0007285,6.92e-13,72;UBERON:0007524,1.10e-12,73;UBERON:0001723,1.50e-12,3;UBERON:0001033,1.50e-12,3;UBERON:0010056,1.50e-12,3;UBERON:0007503,9.28e-12,78;UBERON:0000486,6.06e-11,83;UBERON:0005418,2.84e-10,1;UBERON:0001389,2.84e-10,1;UBERON:0000026,2.84e-10,1;UBERON:0008784,2.84e-10,1;UBERON:0006058,2.84e-10,1;UBERON:0003663,2.84e-10,1;UBERON:0004256,2.84e-10,1;UBERON:0004708,2.84e-10,1;UBERON:0002101,2.84e-10,1;UBERON:0004709,2.84e-10,1;UBERON:0002529,2.84e-10,1;UBERON:0010538,2.84e-10,1;UBERON:0003661,2.84e-10,1;UBERON:0010890,2.84e-10,1;UBERON:0002471,2.84e-10,1;UBERON:0001383,2.84e-10,1;UBERON:0004357,2.84e-10,1;UBERON:0004347,2.84e-10,1;UBERON:0005420,2.84e-10,1;UBERON:0005732,2.84e-10,1;UBERON:0010758,2.84e-10,1;UBERON:0010707,2.84e-10,1;UBERON:0000978,2.84e-10,1;UBERON:0002103,2.84e-10,1;UBERON:0001665,2.84e-10,1;UBERON:0003823,2.84e-10,1;UBERON:0000154,2.84e-10,1;UBERON:0010709,2.84e-10,1;UBERON:0005733,2.84e-10,1;UBERON:0005730,2.84e-10,1;UBERON:0005256,7.30e-10,122;UBERON:0000490,9.65e-08,148;UBERON:0003104,5.38e-07,160;UBERON:0009142,5.38e-07,160|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,10.2906097969879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.70547620162874,2.31650090668127,1.64381058040307,6.62525563987614,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,6.86286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,3.67348729510063,0.308097234229289,0.460511024178389,2.20538515975249,0,0.290033387828457,1.19317278382541,12.4644849905432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5913 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9863 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-8bp_to_ENST00000352508_5end | |||
|coexpression_cluster_id=C737 | |||
|description=CAGE_peak_3_at_RAPSN_5end | |||
|id=chr11:47470703..47470715,- | |||
|ontology_enrichment_celltype=CL:0000188!1.33e-21!9;CL:0000515!1.32e-13!4;CL:0000242!2.72e-07!2;CL:0002575!3.08e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000056;8.49e-35;4!CL:0000680;1.43e-30;7!CL:0000515;1.98e-26;3!CL:0000188;4.31e-24;9!CL:0000228;3.71e-10;1!CL:0002372;3.71e-10;1!CL:0002321;1.83e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,8.13e-35,4;CL:0000188,5.23e-24,9;CL:0000228,3.71e-10,1;CL:0002372,3.71e-10,1;CL:0000680,1.55e-08,58;CL:0000056,1.55e-08,58;CL:0000355,1.55e-08,58 | |||
|ontology_enrichment_development_v019=CL:0000515;8.49e-35;4!UBERON:0000358;5.54e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.10e-15!115;UBERON:0001134!1.55e-09!61;UBERON:0002036!1.55e-09!61;UBERON:0003082!1.55e-09!61;UBERON:0002385!4.13e-09!63;UBERON:0001015!4.13e-09!63;UBERON:0000383!4.13e-09!63;UBERON:0004290!8.02e-08!70;UBERON:0000475!1.42e-07!365;UBERON:0000341!1.50e-07!2;UBERON:0001630!1.54e-07!2;UBERON:0005090!1.54e-07!2;UBERON:0003127!5.85e-07!2 | |||
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|short_description=p3@RAPSN | |||
}} |
Revision as of 18:00, 10 September 2013
Short description: | p3@RAPSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RAPSN_5end |
Coexpression cluster: | C737_rhabdomyosarcoma_skeletal_mesenchymal_Skeletal_Pericytes_tongue_diaphragm |
Association with transcript: | -8bp_to_ENST00000352508_5end |
EntrezGene: | RAPSN |
HGNC: | 9863 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 8.13e-35 | 4 |
cell of skeletal muscle | 5.23e-24 | 9 |
multinucleate cell | 3.71e-10 | 1 |
myotube | 3.71e-10 | 1 |
muscle precursor cell | 1.55e-08 | 58 |
myoblast | 1.55e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.55e-08 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.