FFCP PHASE1:Hg19::chr11:13030853..13030875,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=644943|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=33984|TSSclassifier=S|UniProt=A6NK89|association_with_transcript=-94bp_to_NM_001080521_5end|description=CAGE_peak_1_at_RASSF10_5end|id=chr11:13030853..13030875,+|ontology_enrichment_celltype=CL:0000066!6.61e-13!254;CL:0002076!1.68e-10!43;CL:0000223!1.55e-08!59;CL:0002368!8.36e-08!13|ontology_enrichment_celltype_v019=CL:1000507;9.16e-12;10!CL:1000494;9.16e-12;10!CL:0002076;1.62e-10;42!CL:1000497;8.05e-08;17!CL:0002518;8.05e-08;17!CL:1000449;2.56e-07;15!CL:0002621;3.23e-07;3|ontology_enrichment_celltype_v019_2=CL:0000066,1.45e-14,253;CL:0002076,4.81e-12,42;CL:1000507,6.70e-12,10;CL:1000494,6.70e-12,10;CL:0000223,8.26e-12,58;CL:1000497,6.29e-08,17;CL:0002518,6.29e-08,17;CL:1000449,2.11e-07,15;CL:0002621,2.81e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!2.77e-13!129;UBERON:0007811!2.77e-13!129;UBERON:0000033!1.52e-12!123;UBERON:0004121!1.23e-11!169;UBERON:0000922!1.71e-11!612;UBERON:0000481!2.32e-11!347;UBERON:0005743!5.51e-11!86;UBERON:0007023!6.07e-11!115;UBERON:0004111!7.29e-11!241;UBERON:0000924!8.24e-11!173;UBERON:0006601!8.24e-11!173;UBERON:0000483!2.12e-10!309;UBERON:0001017!2.20e-10!82;UBERON:0000119!3.03e-10!312;UBERON:0000477!3.58e-10!286;UBERON:0000064!4.53e-10!219;UBERON:0000475!7.97e-10!365;UBERON:0003075!9.18e-10!86;UBERON:0007284!9.18e-10!86;UBERON:0000468!1.25e-09!659;UBERON:0000467!1.91e-09!625;UBERON:0000062!1.92e-09!511;UBERON:0002050!2.19e-09!605;UBERON:0005423!2.19e-09!605;UBERON:0000480!2.47e-09!626;UBERON:0001049!3.59e-09!57;UBERON:0005068!3.59e-09!57;UBERON:0006241!3.59e-09!57;UBERON:0007135!3.59e-09!57;UBERON:0004119!4.02e-09!169;UBERON:0000925!4.02e-09!169;UBERON:0006595!4.02e-09!169;UBERON:0000923!4.36e-09!604;UBERON:0005291!4.36e-09!604;UBERON:0006598!4.36e-09!604;UBERON:0002532!4.36e-09!604;UBERON:0006554!8.48e-09!44;UBERON:0002346!1.10e-08!90;UBERON:0000464!1.45e-08!104;UBERON:0000073!1.61e-08!94;UBERON:0001016!1.61e-08!94;UBERON:0003056!1.86e-08!61;UBERON:0000489!1.95e-08!32;UBERON:0001008!2.15e-08!45;UBERON:0000025!4.30e-08!194;UBERON:0002616!6.30e-08!59;UBERON:0000466!9.88e-08!126;UBERON:0005177!1.63e-07!107;UBERON:0000955!2.33e-07!69;UBERON:0006238!2.33e-07!69;UBERON:0003080!2.62e-07!42;UBERON:0001007!2.88e-07!155;UBERON:0001555!2.88e-07!155;UBERON:0007026!2.88e-07!155;UBERON:0001004!3.07e-07!72;UBERON:0005911!3.63e-07!82;UBERON:0002780!7.72e-07!41;UBERON:0001890!7.72e-07!41;UBERON:0006240!7.72e-07!41;UBERON:0003103!9.30e-07!69;UBERON:0000956!9.54e-07!25;UBERON:0000203!9.54e-07!25|ontology_enrichment_uberon_v019=UBERON:0004211;9.16e-12;10!UBERON:0009773;9.16e-12;10!UBERON:0001231;9.16e-12;10!UBERON:0004810;9.16e-12;10!UBERON:0006554;3.71e-11;30!UBERON:0001008;3.71e-11;30!UBERON:0000486;8.55e-10;12!UBERON:0005911;1.11e-08;36!UBERON:0000489;1.39e-08;29!UBERON:0000165;5.61e-08;28!UBERON:0002113;1.08e-07;24!UBERON:0011143;1.08e-07;24!UBERON:0000161;2.52e-07;19!UBERON:0000166;2.52e-07;19!UBERON:0006555;2.56e-07;15!UBERON:0004819;2.56e-07;15!UBERON:0001285;2.56e-07;15!UBERON:0007684;2.56e-07;15!UBERON:0001949;3.23e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.72e-12,160;UBERON:0000925,1.72e-12,160;UBERON:0006595,1.72e-12,160;UBERON:0004810,6.70e-12,10;UBERON:0005177,3.85e-10,101;UBERON:0001007,6.78e-10,145;UBERON:0001555,6.78e-10,145;UBERON:0007026,6.78e-10,145;UBERON:0001004,2.59e-09,74;UBERON:0000166,2.94e-09,22;UBERON:0000489,5.64e-08,31;UBERON:0006554,6.93e-08,47;UBERON:0000161,9.14e-08,36;UBERON:0004921,1.10e-07,118;UBERON:0001008,1.23e-07,48;UBERON:0000165,1.40e-07,29;UBERON:0000930,1.40e-07,29;UBERON:0004211,2.11e-07,15;UBERON:0009773,2.11e-07,15;UBERON:0001231,2.11e-07,15;UBERON:0001285,2.11e-07,15;UBERON:0007684,2.11e-07,15;UBERON:0004208,2.11e-07,15;UBERON:0005911,2.18e-07,82;UBERON:0001949,2.81e-07,3;UBERON:0002113,4.90e-07,26;UBERON:0003918,4.90e-07,26;UBERON:0011143,4.90e-07,26;UBERON:0005095,4.90e-07,26;UBERON:0007687,4.90e-07,26;UBERON:0001041,5.94e-07,87;UBERON:0009569,6.35e-07,112;UBERON:0006555,7.62e-07,16;UBERON:0004819,7.62e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.655324116390517,0,0,0,0,0,0,0,0.61560529038394,0.204000691244253,0.626909442956176,2.57612388417951,1.64249310087461,0.376627918784408,0.152826811495903,0.164201178899891,0.314843125254717,0,0,0.154816123316076,2.75826367343678,3.31326510656075,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.665188192387692,1.49319135678314,1.37528029272598,1.09288586487763,0.370784442784429,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,2.18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0.5290268405154,0,0,0,1.64016352285603,0.327796715891087,7.34851305866334,0.305966489225945,0,0.0918948995348449,0,1.66713136080127,1.07185652062471,0.829169439458779,0.620597975171371,0.639701945702943,0.23806443146374,0.581300188524055,0.869046000142011,0,0.190941474834495,0.606351566874658,3.70118471424834,3.08009970976753,3.2328985447002,3.37094365345579,3.99192427855216,1.54666210360852,0,0,3.77265848847665,0,0,0.813792356631477,0,0.603821380773079,0|short_description=p1@RASSF10}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=644943 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=33984 | |||
|TSSclassifier=S | |||
|UniProt=A6NK89 | |||
|association_with_transcript=-94bp_to_NM_001080521_5end | |||
|description=CAGE_peak_1_at_RASSF10_5end | |||
|id=chr11:13030853..13030875,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.61e-13!254;CL:0002076!1.68e-10!43;CL:0000223!1.55e-08!59;CL:0002368!8.36e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:1000507;9.16e-12;10!CL:1000494;9.16e-12;10!CL:0002076;1.62e-10;42!CL:1000497;8.05e-08;17!CL:0002518;8.05e-08;17!CL:1000449;2.56e-07;15!CL:0002621;3.23e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.45e-14,253;CL:0002076,4.81e-12,42;CL:1000507,6.70e-12,10;CL:1000494,6.70e-12,10;CL:0000223,8.26e-12,58;CL:1000497,6.29e-08,17;CL:0002518,6.29e-08,17;CL:1000449,2.11e-07,15;CL:0002621,2.81e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.77e-13!129;UBERON:0007811!2.77e-13!129;UBERON:0000033!1.52e-12!123;UBERON:0004121!1.23e-11!169;UBERON:0000922!1.71e-11!612;UBERON:0000481!2.32e-11!347;UBERON:0005743!5.51e-11!86;UBERON:0007023!6.07e-11!115;UBERON:0004111!7.29e-11!241;UBERON:0000924!8.24e-11!173;UBERON:0006601!8.24e-11!173;UBERON:0000483!2.12e-10!309;UBERON:0001017!2.20e-10!82;UBERON:0000119!3.03e-10!312;UBERON:0000477!3.58e-10!286;UBERON:0000064!4.53e-10!219;UBERON:0000475!7.97e-10!365;UBERON:0003075!9.18e-10!86;UBERON:0007284!9.18e-10!86;UBERON:0000468!1.25e-09!659;UBERON:0000467!1.91e-09!625;UBERON:0000062!1.92e-09!511;UBERON:0002050!2.19e-09!605;UBERON:0005423!2.19e-09!605;UBERON:0000480!2.47e-09!626;UBERON:0001049!3.59e-09!57;UBERON:0005068!3.59e-09!57;UBERON:0006241!3.59e-09!57;UBERON:0007135!3.59e-09!57;UBERON:0004119!4.02e-09!169;UBERON:0000925!4.02e-09!169;UBERON:0006595!4.02e-09!169;UBERON:0000923!4.36e-09!604;UBERON:0005291!4.36e-09!604;UBERON:0006598!4.36e-09!604;UBERON:0002532!4.36e-09!604;UBERON:0006554!8.48e-09!44;UBERON:0002346!1.10e-08!90;UBERON:0000464!1.45e-08!104;UBERON:0000073!1.61e-08!94;UBERON:0001016!1.61e-08!94;UBERON:0003056!1.86e-08!61;UBERON:0000489!1.95e-08!32;UBERON:0001008!2.15e-08!45;UBERON:0000025!4.30e-08!194;UBERON:0002616!6.30e-08!59;UBERON:0000466!9.88e-08!126;UBERON:0005177!1.63e-07!107;UBERON:0000955!2.33e-07!69;UBERON:0006238!2.33e-07!69;UBERON:0003080!2.62e-07!42;UBERON:0001007!2.88e-07!155;UBERON:0001555!2.88e-07!155;UBERON:0007026!2.88e-07!155;UBERON:0001004!3.07e-07!72;UBERON:0005911!3.63e-07!82;UBERON:0002780!7.72e-07!41;UBERON:0001890!7.72e-07!41;UBERON:0006240!7.72e-07!41;UBERON:0003103!9.30e-07!69;UBERON:0000956!9.54e-07!25;UBERON:0000203!9.54e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;9.16e-12;10!UBERON:0009773;9.16e-12;10!UBERON:0001231;9.16e-12;10!UBERON:0004810;9.16e-12;10!UBERON:0006554;3.71e-11;30!UBERON:0001008;3.71e-11;30!UBERON:0000486;8.55e-10;12!UBERON:0005911;1.11e-08;36!UBERON:0000489;1.39e-08;29!UBERON:0000165;5.61e-08;28!UBERON:0002113;1.08e-07;24!UBERON:0011143;1.08e-07;24!UBERON:0000161;2.52e-07;19!UBERON:0000166;2.52e-07;19!UBERON:0006555;2.56e-07;15!UBERON:0004819;2.56e-07;15!UBERON:0001285;2.56e-07;15!UBERON:0007684;2.56e-07;15!UBERON:0001949;3.23e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.72e-12,160;UBERON:0000925,1.72e-12,160;UBERON:0006595,1.72e-12,160;UBERON:0004810,6.70e-12,10;UBERON:0005177,3.85e-10,101;UBERON:0001007,6.78e-10,145;UBERON:0001555,6.78e-10,145;UBERON:0007026,6.78e-10,145;UBERON:0001004,2.59e-09,74;UBERON:0000166,2.94e-09,22;UBERON:0000489,5.64e-08,31;UBERON:0006554,6.93e-08,47;UBERON:0000161,9.14e-08,36;UBERON:0004921,1.10e-07,118;UBERON:0001008,1.23e-07,48;UBERON:0000165,1.40e-07,29;UBERON:0000930,1.40e-07,29;UBERON:0004211,2.11e-07,15;UBERON:0009773,2.11e-07,15;UBERON:0001231,2.11e-07,15;UBERON:0001285,2.11e-07,15;UBERON:0007684,2.11e-07,15;UBERON:0004208,2.11e-07,15;UBERON:0005911,2.18e-07,82;UBERON:0001949,2.81e-07,3;UBERON:0002113,4.90e-07,26;UBERON:0003918,4.90e-07,26;UBERON:0011143,4.90e-07,26;UBERON:0005095,4.90e-07,26;UBERON:0007687,4.90e-07,26;UBERON:0001041,5.94e-07,87;UBERON:0009569,6.35e-07,112;UBERON:0006555,7.62e-07,16;UBERON:0004819,7.62e-07,16 | |||
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| |||
|short_description=p1@RASSF10 | |||
}} |
Revision as of 16:40, 10 September 2013
Short description: | p1@RASSF10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RASSF10_5end |
Coexpression cluster: | NA |
Association with transcript: | -94bp_to_NM_001080521_5end |
EntrezGene: | RASSF10 |
HGNC: | 33984 |
UniProt: | A6NK89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.45e-14 | 253 |
endo-epithelial cell | 4.81e-12 | 42 |
kidney tubule cell | 6.70e-12 | 10 |
nephron tubule epithelial cell | 6.70e-12 | 10 |
endodermal cell | 8.26e-12 | 58 |
kidney cell | 6.29e-08 | 17 |
kidney epithelial cell | 6.29e-08 | 17 |
epithelial cell of nephron | 2.11e-07 | 15 |
gingival epithelial cell | 2.81e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.72e-12 | 160 |
endoderm | 1.72e-12 | 160 |
presumptive endoderm | 1.72e-12 | 160 |
nephron tubule epithelium | 6.70e-12 | 10 |
trunk region element | 3.85e-10 | 101 |
digestive system | 6.78e-10 | 145 |
digestive tract | 6.78e-10 | 145 |
primitive gut | 6.78e-10 | 145 |
respiratory system | 2.59e-09 | 74 |
oral opening | 2.94e-09 | 22 |
cavitated compound organ | 5.64e-08 | 31 |
urinary system structure | 6.93e-08 | 47 |
orifice | 9.14e-08 | 36 |
subdivision of digestive tract | 1.10e-07 | 118 |
renal system | 1.23e-07 | 48 |
mouth | 1.40e-07 | 29 |
stomodeum | 1.40e-07 | 29 |
nephron epithelium | 2.11e-07 | 15 |
renal tubule | 2.11e-07 | 15 |
nephron tubule | 2.11e-07 | 15 |
nephron | 2.11e-07 | 15 |
uriniferous tubule | 2.11e-07 | 15 |
nephrogenic mesenchyme | 2.11e-07 | 15 |
endo-epithelium | 2.18e-07 | 82 |
gingival epithelium | 2.81e-07 | 3 |
kidney | 4.90e-07 | 26 |
kidney mesenchyme | 4.90e-07 | 26 |
upper urinary tract | 4.90e-07 | 26 |
kidney rudiment | 4.90e-07 | 26 |
kidney field | 4.90e-07 | 26 |
foregut | 5.94e-07 | 87 |
subdivision of trunk | 6.35e-07 | 112 |
excretory tube | 7.62e-07 | 16 |
kidney epithelium | 7.62e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.