FFCP PHASE1:Hg19::chr10:129034788..129034792,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:129034788..129034792,+|id=chr10:129034788..129034792,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005425;7.95e-10;1|ontology_enrichment_disease=DOID:0050687!9.25e-09!143;DOID:305!2.03e-07!106|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.51e-13!115;UBERON:0000073!3.19e-08!94;UBERON:0001016!3.19e-08!94;UBERON:0002780!3.22e-08!41;UBERON:0001890!3.22e-08!41;UBERON:0006240!3.22e-08!41;UBERON:0001049!3.81e-08!57;UBERON:0005068!3.81e-08!57;UBERON:0006241!3.81e-08!57;UBERON:0007135!3.81e-08!57;UBERON:0003080!8.43e-08!42;UBERON:0001017!1.34e-07!82;UBERON:0000955!1.64e-07!69;UBERON:0006238!1.64e-07!69;UBERON:0002616!2.20e-07!59;UBERON:0001893!4.73e-07!34;UBERON:0005743!5.42e-07!86;UBERON:0002346!6.71e-07!90;UBERON:0003075!7.08e-07!86;UBERON:0007284!7.08e-07!86;UBERON:0002020!7.25e-07!34;UBERON:0003528!7.25e-07!34|ontology_enrichment_uberon_v019=UBERON:0000941;7.95e-10;1!UBERON:0001785;7.95e-10;1!UBERON:0002464;7.95e-10;1!UBERON:0004904;7.95e-10;1!UBERON:0001021;7.95e-10;1!UBERON:0002038;2.65e-09;1!UBERON:0001301;2.65e-09;1!UBERON:0002426;2.65e-09;1!UBERON:0003831;2.65e-09;1!UBERON:0003898;2.65e-09;1!UBERON:0004830;2.65e-09;1!UBERON:0009661;2.65e-09;1!UBERON:0002950;2.65e-09;1!UBERON:0003830;2.65e-09;1!UBERON:0005175;2.65e-09;1!UBERON:0001774;2.65e-09;1!UBERON:0001103;2.65e-09;1!UBERON:0001891;2.65e-09;1!UBERON:0000160;1.96e-07;17!UBERON:0000059;2.85e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.98e-10,1;UBERON:0001785,7.98e-10,1;UBERON:0002464,7.98e-10,1;UBERON:0004904,7.98e-10,1;UBERON:0001021,7.98e-10,1;UBERON:0003902,7.98e-10,1;UBERON:0005425,7.98e-10,1;UBERON:0002426,1.84e-09,1;UBERON:0003831,1.84e-09,1;UBERON:0003898,1.84e-09,1;UBERON:0004830,1.84e-09,1;UBERON:0003830,1.84e-09,1;UBERON:0005175,1.84e-09,1;UBERON:0001774,1.84e-09,1;UBERON:0001103,1.84e-09,1;UBERON:0010084,1.84e-09,1;UBERON:0001301,2.16e-09,1;UBERON:0002038,5.28e-09,1;UBERON:0009661,5.28e-09,1;UBERON:0002950,5.28e-09,1;UBERON:0001891,5.28e-09,1;UBERON:0009616,5.28e-09,1;UBERON:0010286,5.28e-09,1;UBERON:0000160,2.03e-07,17;UBERON:0000059,2.71e-07,11|phase1_expression=0.726713517082227,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.221729397462564,0.175669571386252,0.327447688744282,0,0,0.324547393654683,0.522389211897802,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,1.06729878806013,0.66944122552934,0,0,0.24406205754817,0.367663080345869,0,0.267899184852239,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0.311211035399766,0,0.490385709340376,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0,0.500474079487857,0,0,0,0.150238058906597,0,0,0,0,0.300091096084402,0,0,0,0.337552664482532,0.0974370051611986,0.504867548488229,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0,0.132529768321485,0,0,0.252320850875628,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0.190254152234598,0,0,0.246217006087397,0,0.148631162288728,0,0.335964256397719,0,0,0,0,0.492663237895943,0,0.207328115540772,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0,0.387815147273333,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0.415941723061614,1.60586089917446,0.473107245101804,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.183138929636687,0.165018999841176,0,0,0,0.193341436584244,0.616194468458578,0.15350367472613,0.137836572484531,0.751941714077915,0.290033387828457,0.426133137080504,0.0890320356467374,0,0.384380134730212,0.510450849978337,0,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0,0,0,0,0,0.719489830333259,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0.229723400206959,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:129034788..129034792,+ | |||
|id=chr10:129034788..129034792,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;7.95e-10;1 | |||
|ontology_enrichment_disease=DOID:0050687!9.25e-09!143;DOID:305!2.03e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.51e-13!115;UBERON:0000073!3.19e-08!94;UBERON:0001016!3.19e-08!94;UBERON:0002780!3.22e-08!41;UBERON:0001890!3.22e-08!41;UBERON:0006240!3.22e-08!41;UBERON:0001049!3.81e-08!57;UBERON:0005068!3.81e-08!57;UBERON:0006241!3.81e-08!57;UBERON:0007135!3.81e-08!57;UBERON:0003080!8.43e-08!42;UBERON:0001017!1.34e-07!82;UBERON:0000955!1.64e-07!69;UBERON:0006238!1.64e-07!69;UBERON:0002616!2.20e-07!59;UBERON:0001893!4.73e-07!34;UBERON:0005743!5.42e-07!86;UBERON:0002346!6.71e-07!90;UBERON:0003075!7.08e-07!86;UBERON:0007284!7.08e-07!86;UBERON:0002020!7.25e-07!34;UBERON:0003528!7.25e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;7.95e-10;1!UBERON:0001785;7.95e-10;1!UBERON:0002464;7.95e-10;1!UBERON:0004904;7.95e-10;1!UBERON:0001021;7.95e-10;1!UBERON:0002038;2.65e-09;1!UBERON:0001301;2.65e-09;1!UBERON:0002426;2.65e-09;1!UBERON:0003831;2.65e-09;1!UBERON:0003898;2.65e-09;1!UBERON:0004830;2.65e-09;1!UBERON:0009661;2.65e-09;1!UBERON:0002950;2.65e-09;1!UBERON:0003830;2.65e-09;1!UBERON:0005175;2.65e-09;1!UBERON:0001774;2.65e-09;1!UBERON:0001103;2.65e-09;1!UBERON:0001891;2.65e-09;1!UBERON:0000160;1.96e-07;17!UBERON:0000059;2.85e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,7.98e-10,1;UBERON:0001785,7.98e-10,1;UBERON:0002464,7.98e-10,1;UBERON:0004904,7.98e-10,1;UBERON:0001021,7.98e-10,1;UBERON:0003902,7.98e-10,1;UBERON:0005425,7.98e-10,1;UBERON:0002426,1.84e-09,1;UBERON:0003831,1.84e-09,1;UBERON:0003898,1.84e-09,1;UBERON:0004830,1.84e-09,1;UBERON:0003830,1.84e-09,1;UBERON:0005175,1.84e-09,1;UBERON:0001774,1.84e-09,1;UBERON:0001103,1.84e-09,1;UBERON:0010084,1.84e-09,1;UBERON:0001301,2.16e-09,1;UBERON:0002038,5.28e-09,1;UBERON:0009661,5.28e-09,1;UBERON:0002950,5.28e-09,1;UBERON:0001891,5.28e-09,1;UBERON:0009616,5.28e-09,1;UBERON:0010286,5.28e-09,1;UBERON:0000160,2.03e-07,17;UBERON:0000059,2.71e-07,11 | |||
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| |||
|short_description=p@chr10:129034788..129034792,+ | |||
}} |
Revision as of 12:19, 10 September 2013
Short description: | p@chr10:129034788..129034792, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:129034788..129034792, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 7.98e-10 | 1 |
cranial nerve | 7.98e-10 | 1 |
nerve trunk | 7.98e-10 | 1 |
nerve connecting eye with brain | 7.98e-10 | 1 |
nerve | 7.98e-10 | 1 |
retinal neural layer | 7.98e-10 | 1 |
presumptive neural retina | 7.98e-10 | 1 |
chest muscle | 1.84e-09 | 1 |
respiratory system muscle | 1.84e-09 | 1 |
skeletal muscle of trunk | 1.84e-09 | 1 |
respiratory system skeletal muscle | 1.84e-09 | 1 |
thoracic segment muscle | 1.84e-09 | 1 |
chest organ | 1.84e-09 | 1 |
muscle of trunk | 1.84e-09 | 1 |
diaphragm | 1.84e-09 | 1 |
future diaphragm | 1.84e-09 | 1 |
epididymis | 2.16e-09 | 1 |
substantia nigra | 5.28e-09 | 1 |
midbrain nucleus | 5.28e-09 | 1 |
regional part of midbrain | 5.28e-09 | 1 |
midbrain | 5.28e-09 | 1 |
presumptive midbrain | 5.28e-09 | 1 |
midbrain neural tube | 5.28e-09 | 1 |
intestine | 2.03e-07 | 17 |
large intestine | 2.71e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.