FFCP PHASE1:Hg19::chr10:126423550..126423555,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1569|description=CAGE_peak_at_chr10:126423550..126423555,-|id=chr10:126423550..126423555,-|ontology_enrichment_celltype=CL:0000838!2.77e-31!52;CL:0000542!1.48e-30!53;CL:0000051!1.48e-30!53;CL:0000084!1.03e-19!25;CL:0000827!1.03e-19!25;CL:0000791!2.46e-17!18;CL:0000789!2.46e-17!18;CL:0002420!2.46e-17!18;CL:0002419!2.46e-17!18;CL:0000790!2.46e-17!18;CL:0000738!3.21e-16!140;CL:0000625!1.13e-15!11;CL:0002087!5.90e-14!119;CL:0000037!1.46e-12!172;CL:0000566!1.46e-12!172;CL:0000988!2.19e-11!182;CL:0002031!5.21e-11!124;CL:0000945!1.35e-10!24;CL:0000826!1.35e-10!24;CL:0000784!1.39e-10!3;CL:0000236!9.62e-10!14;CL:0002032!7.84e-09!165;CL:0000837!7.84e-09!165|ontology_enrichment_celltype_v019=CL:0000784;9.33e-35;3!CL:0002032;2.75e-12;1!CL:0000557;2.75e-12;1!CL:0000451;6.27e-10;10!CL:0000542;8.37e-09;53!CL:0000236;3.79e-08;13!CL:0000945;1.59e-07;24!CL:0000084;2.50e-07;25!CL:0000815;9.01e-07;2!CL:0000792;9.01e-07;2!CL:0002677;9.01e-07;2|ontology_enrichment_celltype_v019_2=CL:0000784,9.90e-35,3;CL:0000838,1.20e-12,52;CL:0000542,2.15e-12,53;CL:0000051,2.15e-12,53;CL:0000451,6.37e-10,10;CL:0000738,2.85e-08,136;CL:0000037,9.58e-08,168;CL:0000236,1.37e-07,14;CL:0000945,1.62e-07,24;CL:0000826,1.62e-07,24;CL:0000084,2.48e-07,25;CL:0000827,2.48e-07,25;CL:0000988,2.90e-07,177;CL:0000815,9.54e-07,2;CL:0000792,9.54e-07,2;CL:0002677,9.54e-07,2|ontology_enrichment_development_v019=CL:0000051;8.37e-09;53!UBERON:0006965;9.01e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4960;2.75e-12;1!DOID:0070004;2.75e-12;1|ontology_enrichment_disease_v019_2=DOID:4960,2.75e-12,1;DOID:0070004,2.75e-12,1|ontology_enrichment_uberon=UBERON:0004177!2.79e-10!7;UBERON:0002370!1.24e-07!4;UBERON:0005058!1.24e-07!4;UBERON:0009113!1.24e-07!4;UBERON:0003295!1.24e-07!4;UBERON:0005562!1.24e-07!4;UBERON:0003408!1.71e-07!10;UBERON:0001042!2.32e-07!10;UBERON:0009145!2.32e-07!10|ontology_enrichment_uberon_v019=UBERON:0002370;1.01e-23;2!UBERON:0005058;1.01e-23;2!UBERON:0009113;1.01e-23;2!UBERON:0004177;4.55e-10;5!UBERON:0005057;4.55e-10;5!UBERON:0002390;1.20e-07;32!UBERON:0002405;7.82e-07;27|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.20e-12,4;UBERON:0005058,2.20e-12,4;UBERON:0009113,2.20e-12,4;UBERON:0003295,2.20e-12,4;UBERON:0005562,2.20e-12,4;UBERON:0003408,8.64e-11,10;UBERON:0003351,1.50e-08,6;UBERON:0004177,1.90e-07,7;UBERON:0005057,1.90e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28019066769952,0.800791974072025,1.14950487990897,0,0.954053754535364,0,0.587237189370939,1.14681968437569,0,0,0,0,0,0.616804496998528,0.334372990781356,0,0,0,0.557052284425868,1.17842362989935,0.443067789167242,0.270803863765016,0.25618263945135,0.650296737799391,0,0,0,0,0.535081656179426,1.04535523804977,0.113309342697566,0,0.34362744548263,0.759059076058509,0.318565414324097,0.651083453856419,0,0.602300476311091,0.639933055772092,1.24930726552346,0.473554504088034,0,0.403213486449465,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,8.10868122638163,5.14795419702115,5.20040501861391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0.197030760201927,0.215627574859517,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0.411362273086194,0,1.08006287447623,0,0,0,0,0,0,2.84567373393656,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,4.08773192782946,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20550485762571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.97785846720485,4.15900585782248,0,0,0,0,0.342233301085281,0.875576689189638,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.20764276154616,0.320568492303233|short_description=p@chr10:126423550..126423555,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1569 | |||
|description=CAGE_peak_at_chr10:126423550..126423555,- | |||
|id=chr10:126423550..126423555,- | |||
|ontology_enrichment_celltype=CL:0000838!2.77e-31!52;CL:0000542!1.48e-30!53;CL:0000051!1.48e-30!53;CL:0000084!1.03e-19!25;CL:0000827!1.03e-19!25;CL:0000791!2.46e-17!18;CL:0000789!2.46e-17!18;CL:0002420!2.46e-17!18;CL:0002419!2.46e-17!18;CL:0000790!2.46e-17!18;CL:0000738!3.21e-16!140;CL:0000625!1.13e-15!11;CL:0002087!5.90e-14!119;CL:0000037!1.46e-12!172;CL:0000566!1.46e-12!172;CL:0000988!2.19e-11!182;CL:0002031!5.21e-11!124;CL:0000945!1.35e-10!24;CL:0000826!1.35e-10!24;CL:0000784!1.39e-10!3;CL:0000236!9.62e-10!14;CL:0002032!7.84e-09!165;CL:0000837!7.84e-09!165 | |||
|ontology_enrichment_celltype_v019=CL:0000784;9.33e-35;3!CL:0002032;2.75e-12;1!CL:0000557;2.75e-12;1!CL:0000451;6.27e-10;10!CL:0000542;8.37e-09;53!CL:0000236;3.79e-08;13!CL:0000945;1.59e-07;24!CL:0000084;2.50e-07;25!CL:0000815;9.01e-07;2!CL:0000792;9.01e-07;2!CL:0002677;9.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,9.90e-35,3;CL:0000838,1.20e-12,52;CL:0000542,2.15e-12,53;CL:0000051,2.15e-12,53;CL:0000451,6.37e-10,10;CL:0000738,2.85e-08,136;CL:0000037,9.58e-08,168;CL:0000236,1.37e-07,14;CL:0000945,1.62e-07,24;CL:0000826,1.62e-07,24;CL:0000084,2.48e-07,25;CL:0000827,2.48e-07,25;CL:0000988,2.90e-07,177;CL:0000815,9.54e-07,2;CL:0000792,9.54e-07,2;CL:0002677,9.54e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;8.37e-09;53!UBERON:0006965;9.01e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;2.75e-12;1!DOID:0070004;2.75e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.75e-12,1;DOID:0070004,2.75e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.79e-10!7;UBERON:0002370!1.24e-07!4;UBERON:0005058!1.24e-07!4;UBERON:0009113!1.24e-07!4;UBERON:0003295!1.24e-07!4;UBERON:0005562!1.24e-07!4;UBERON:0003408!1.71e-07!10;UBERON:0001042!2.32e-07!10;UBERON:0009145!2.32e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.01e-23;2!UBERON:0005058;1.01e-23;2!UBERON:0009113;1.01e-23;2!UBERON:0004177;4.55e-10;5!UBERON:0005057;4.55e-10;5!UBERON:0002390;1.20e-07;32!UBERON:0002405;7.82e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.20e-12,4;UBERON:0005058,2.20e-12,4;UBERON:0009113,2.20e-12,4;UBERON:0003295,2.20e-12,4;UBERON:0005562,2.20e-12,4;UBERON:0003408,8.64e-11,10;UBERON:0003351,1.50e-08,6;UBERON:0004177,1.90e-07,7;UBERON:0005057,1.90e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28019066769952,0.800791974072025,1.14950487990897,0,0.954053754535364,0,0.587237189370939,1.14681968437569,0,0,0,0,0,0.616804496998528,0.334372990781356,0,0,0,0.557052284425868,1.17842362989935,0.443067789167242,0.270803863765016,0.25618263945135,0.650296737799391,0,0,0,0,0.535081656179426,1.04535523804977,0.113309342697566,0,0.34362744548263,0.759059076058509,0.318565414324097,0.651083453856419,0,0.602300476311091,0.639933055772092,1.24930726552346,0.473554504088034,0,0.403213486449465,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,8.10868122638163,5.14795419702115,5.20040501861391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0.197030760201927,0.215627574859517,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.714695326373367,0.411362273086194,0,1.08006287447623,0,0,0,0,0,0,2.84567373393656,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,4.08773192782946,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20550485762571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.97785846720485,4.15900585782248,0,0,0,0,0.342233301085281,0.875576689189638,0.0717222053926763,0,0,0,0,0,0,0,0,0,1.20764276154616,0.320568492303233 | |||
|short_description=p@chr10:126423550..126423555,- | |||
}} |
Revision as of 12:14, 10 September 2013
Short description: | p@chr10:126423550..126423555, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126423550..126423555, - |
Coexpression cluster: | C1569_Dendritic_thymus_Hodgkin_acute_granulocyte_chronic_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 9.90e-35 | 3 |
lymphoid lineage restricted progenitor cell | 1.20e-12 | 52 |
lymphocyte | 2.15e-12 | 53 |
common lymphoid progenitor | 2.15e-12 | 53 |
dendritic cell | 6.37e-10 | 10 |
leukocyte | 2.85e-08 | 136 |
hematopoietic stem cell | 9.58e-08 | 168 |
B cell | 1.37e-07 | 14 |
lymphocyte of B lineage | 1.62e-07 | 24 |
pro-B cell | 1.62e-07 | 24 |
T cell | 2.48e-07 | 25 |
pro-T cell | 2.48e-07 | 25 |
hematopoietic cell | 2.90e-07 | 177 |
regulatory T cell | 9.54e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.54e-07 | 2 |
naive regulatory T cell | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.20e-12 | 4 |
hemolymphoid system gland | 2.20e-12 | 4 |
thymic region | 2.20e-12 | 4 |
pharyngeal gland | 2.20e-12 | 4 |
thymus primordium | 2.20e-12 | 4 |
gland of gut | 8.64e-11 | 10 |
pharyngeal epithelium | 1.50e-08 | 6 |
hemopoietic organ | 1.90e-07 | 7 |
immune organ | 1.90e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.75e-12 | 1 |
myeloma | 2.75e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.