FFCP PHASE1:Hg19::chr10:115336944..115336973,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C5|description=CAGE_peak_at_chr10:115336944..115336973,+|id=chr10:115336944..115336973,+|ontology_enrichment_celltype=CL:0000181!2.99e-16!12;CL:0000417!2.99e-16!12;CL:0000668!2.99e-16!12;CL:0000414!2.99e-16!12;CL:0000412!2.99e-16!12;CL:0000182!2.99e-16!12;CL:0002557!8.64e-13!1;CL:0000313!9.73e-13!1;CL:0000159!5.28e-07!2|ontology_enrichment_celltype_v019=CL:0000182;4.75e-22;12|ontology_enrichment_celltype_v019_2=CL:0000182,5.10e-22,12|ontology_enrichment_development_v019=UBERON:0004161;2.68e-11;11!UBERON:0009497;1.04e-09;13|ontology_enrichment_disease=DOID:2152!9.73e-13!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009497!9.24e-23!25;UBERON:0000015!9.24e-23!25;UBERON:0002423!9.24e-23!25;UBERON:0006235!9.24e-23!25;UBERON:0004161!9.24e-23!25;UBERON:0002107!2.35e-22!19;UBERON:0006925!2.35e-22!19;UBERON:0008836!2.35e-22!19;UBERON:0008835!2.86e-19!22;UBERON:0003894!2.86e-19!22;UBERON:0009854!2.02e-18!23;UBERON:0007499!6.36e-17!25;UBERON:0005057!2.93e-16!26;UBERON:0009856!2.93e-16!26;UBERON:0002365!1.39e-13!31;UBERON:0002330!1.39e-13!31;UBERON:0003929!3.22e-13!54;UBERON:0005172!5.26e-13!55;UBERON:0005173!5.26e-13!55;UBERON:0004911!9.73e-13!1;UBERON:0002022!1.09e-12!1;UBERON:0002368!5.42e-12!35;UBERON:0002417!1.21e-11!61;UBERON:0000916!1.21e-11!61;UBERON:0000949!3.04e-09!45;UBERON:0005911!2.09e-08!82;UBERON:0007497!4.98e-07!2;UBERON:0003643!4.98e-07!2;UBERON:0003504!4.98e-07!2;UBERON:0003469!4.98e-07!2;UBERON:0003496!4.98e-07!2;UBERON:0004797!4.98e-07!2;UBERON:0002012!4.98e-07!2;UBERON:0008886!4.98e-07!2;UBERON:0007303!4.98e-07!2;UBERON:0002061!4.98e-07!2;UBERON:0005432!4.98e-07!2;UBERON:0004363!4.98e-07!2;UBERON:0004909!5.28e-07!2;UBERON:0002530!5.95e-07!59|ontology_enrichment_uberon_v019=UBERON:0002107;1.65e-37;19!UBERON:0006925;1.65e-37;19!UBERON:0002423;1.20e-28;25!UBERON:0002365;3.94e-23;31!UBERON:0002330;3.94e-23;31!UBERON:0002368;5.27e-20;33!UBERON:0000949;1.71e-14;43!UBERON:0005172;1.90e-10;52!UBERON:0005173;1.90e-10;52!UBERON:0002417;4.30e-08;58!UBERON:0000916;4.30e-08;58!UBERON:0002530;1.24e-07;57!UBERON:0001007;1.68e-07;81|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.65e-37,19;UBERON:0006925,1.65e-37,19;UBERON:0008836,1.65e-37,19;UBERON:0008835,1.78e-32,22;UBERON:0003894,1.78e-32,22;UBERON:0009854,4.34e-31,23;UBERON:0007499,1.20e-28,25;UBERON:0009497,1.20e-28,25;UBERON:0000015,1.20e-28,25;UBERON:0002423,1.20e-28,25;UBERON:0006235,1.20e-28,25;UBERON:0004161,1.20e-28,25;UBERON:0009856,1.45e-27,26;UBERON:0002365,3.34e-23,31;UBERON:0002330,3.34e-23,31;UBERON:0002368,1.32e-20,35;UBERON:0000949,3.99e-16,45;UBERON:0003929,1.67e-13,54;UBERON:0005172,1.67e-13,54;UBERON:0005173,1.67e-13,54;UBERON:0002530,2.17e-12,59;UBERON:0002417,3.45e-12,60;UBERON:0000916,3.45e-12,60;UBERON:0005911,5.32e-09,82;UBERON:0001041,1.69e-08,87;UBERON:0005177,2.36e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,11.7939266001315,6.49868897349544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.688992370603241,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.88795498286987,6.62534444561107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr10:115336944..115336973,+ | |||
|id=chr10:115336944..115336973,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.99e-16!12;CL:0000417!2.99e-16!12;CL:0000668!2.99e-16!12;CL:0000414!2.99e-16!12;CL:0000412!2.99e-16!12;CL:0000182!2.99e-16!12;CL:0002557!8.64e-13!1;CL:0000313!9.73e-13!1;CL:0000159!5.28e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.75e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.10e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.68e-11;11!UBERON:0009497;1.04e-09;13 | |||
|ontology_enrichment_disease=DOID:2152!9.73e-13!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002107;1.65e-37;19!UBERON:0006925;1.65e-37;19!UBERON:0002423;1.20e-28;25!UBERON:0002365;3.94e-23;31!UBERON:0002330;3.94e-23;31!UBERON:0002368;5.27e-20;33!UBERON:0000949;1.71e-14;43!UBERON:0005172;1.90e-10;52!UBERON:0005173;1.90e-10;52!UBERON:0002417;4.30e-08;58!UBERON:0000916;4.30e-08;58!UBERON:0002530;1.24e-07;57!UBERON:0001007;1.68e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.65e-37,19;UBERON:0006925,1.65e-37,19;UBERON:0008836,1.65e-37,19;UBERON:0008835,1.78e-32,22;UBERON:0003894,1.78e-32,22;UBERON:0009854,4.34e-31,23;UBERON:0007499,1.20e-28,25;UBERON:0009497,1.20e-28,25;UBERON:0000015,1.20e-28,25;UBERON:0002423,1.20e-28,25;UBERON:0006235,1.20e-28,25;UBERON:0004161,1.20e-28,25;UBERON:0009856,1.45e-27,26;UBERON:0002365,3.34e-23,31;UBERON:0002330,3.34e-23,31;UBERON:0002368,1.32e-20,35;UBERON:0000949,3.99e-16,45;UBERON:0003929,1.67e-13,54;UBERON:0005172,1.67e-13,54;UBERON:0005173,1.67e-13,54;UBERON:0002530,2.17e-12,59;UBERON:0002417,3.45e-12,60;UBERON:0000916,3.45e-12,60;UBERON:0005911,5.32e-09,82;UBERON:0001041,1.69e-08,87;UBERON:0005177,2.36e-07,101 | |||
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|short_description=p@chr10:115336944..115336973,+ | |||
}} |
Revision as of 11:50, 10 September 2013
Short description: | p@chr10:115336944..115336973, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:115336944..115336973, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.10e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.65e-37 | 19 |
digestive gland | 1.65e-37 | 19 |
liver bud | 1.65e-37 | 19 |
hepatic diverticulum | 1.78e-32 | 22 |
liver primordium | 1.78e-32 | 22 |
digestive tract diverticulum | 4.34e-31 | 23 |
epithelial sac | 1.20e-28 | 25 |
epithelium of foregut-midgut junction | 1.20e-28 | 25 |
anatomical boundary | 1.20e-28 | 25 |
hepatobiliary system | 1.20e-28 | 25 |
foregut-midgut junction | 1.20e-28 | 25 |
septum transversum | 1.20e-28 | 25 |
sac | 1.45e-27 | 26 |
exocrine gland | 3.34e-23 | 31 |
exocrine system | 3.34e-23 | 31 |
endocrine gland | 1.32e-20 | 35 |
endocrine system | 3.99e-16 | 45 |
gut epithelium | 1.67e-13 | 54 |
abdomen element | 1.67e-13 | 54 |
abdominal segment element | 1.67e-13 | 54 |
gland | 2.17e-12 | 59 |
abdominal segment of trunk | 3.45e-12 | 60 |
abdomen | 3.45e-12 | 60 |
endo-epithelium | 5.32e-09 | 82 |
foregut | 1.69e-08 | 87 |
trunk region element | 2.36e-07 | 101 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.