FFCP PHASE1:Hg19::chr10:96046756..96046775,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=100128054|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=51bp_to_NR_033969,uc001kjo.1_5end|coexpression_cluster_id=C1602|description=CAGE_peak_2_at_LOC100128054_5end|id=chr10:96046756..96046775,-|ontology_enrichment_celltype=CL:0000222!8.15e-09!119;CL:0000055!1.17e-07!180;CL:0000213!6.02e-07!57;CL:0000215!6.02e-07!57|ontology_enrichment_celltype_v019=CL:0002590;1.48e-11;3!CL:0002580;2.37e-11;3!CL:0002586;2.59e-11;3!CL:0002615;2.92e-11;3!CL:0002579;7.32e-11;3!CL:0002541;1.48e-10;3!CL:0000349;6.25e-10;19!CL:0002334;6.99e-10;12!CL:0000136;1.78e-09;13!CL:0000149;1.40e-08;4!CL:0002617;1.46e-08;2!CL:0002561;1.12e-07;2|ontology_enrichment_celltype_v019_2=CL:0002590,1.59e-11,3;CL:0002580,2.03e-11,3;CL:0002615,2.18e-11,3;CL:0002586,2.97e-11,3;CL:0002579,5.32e-11,3;CL:0002541,1.50e-10,3;CL:0002334,5.59e-10,12;CL:0000349,6.10e-10,19;CL:0002617,1.47e-08,2;CL:0000149,1.55e-08,4;CL:0000136,3.76e-08,15;CL:0002561,1.18e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!1.59e-11!57;UBERON:0003688!3.28e-10!6;UBERON:0002358!3.28e-10!6;UBERON:0003684!3.28e-10!6;UBERON:0001178!3.28e-10!6;UBERON:0000478!2.33e-09!24;UBERON:0005631!5.67e-09!14;UBERON:0000158!5.67e-09!14;UBERON:0002049!3.94e-08!79;UBERON:0007798!3.94e-08!79;UBERON:0003124!9.91e-08!7;UBERON:0007625!1.47e-07!11|ontology_enrichment_uberon_v019=UBERON:0003688;2.17e-20;6!UBERON:0002358;2.17e-20;6!UBERON:0003684;2.17e-20;6!UBERON:0001178;2.17e-20;6!UBERON:0004457;2.32e-13;9!UBERON:0000042;2.32e-13;9!UBERON:0000478;5.91e-12;24!UBERON:0000966;1.94e-11;5!UBERON:0005388;1.94e-11;5!UBERON:0001802;1.94e-11;5!UBERON:0001781;2.59e-11;3!UBERON:0001782;2.59e-11;3!UBERON:0003124;1.48e-10;3!UBERON:0000920;1.48e-10;3!UBERON:0000310;6.76e-09;10!UBERON:0003104;4.19e-08;7!UBERON:0009142;4.19e-08;7!UBERON:0001443;4.75e-08;11!UBERON:0005933;1.12e-07;2!UBERON:0005942;1.12e-07;2!UBERON:0005932;1.12e-07;2!UBERON:0007625;1.30e-07;11!UBERON:0001456;4.34e-07;21!UBERON:0005284;4.50e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.18e-20,6;UBERON:0002358,1.18e-20,6;UBERON:0003684,1.18e-20,6;UBERON:0001178,1.18e-20,6;UBERON:0000478,5.96e-12,24;UBERON:0003124,9.80e-12,7;UBERON:0001782,2.97e-11,3;UBERON:0005424,2.97e-11,3;UBERON:0000920,1.50e-10,3;UBERON:0004457,5.77e-10,12;UBERON:0000042,5.77e-10,12;UBERON:0000966,1.75e-09,6;UBERON:0005388,1.75e-09,6;UBERON:0001802,1.75e-09,6;UBERON:0004923,2.58e-09,66;UBERON:0000310,6.28e-09,10;UBERON:0001781,1.55e-08,4;UBERON:0001443,4.45e-08,11;UBERON:0005631,5.67e-08,14;UBERON:0000158,5.67e-08,14;UBERON:0005933,1.18e-07,2;UBERON:0005942,1.18e-07,2;UBERON:0005932,1.18e-07,2;UBERON:0007625,1.39e-07,11;UBERON:0005284,4.69e-07,5|phase1_expression=13.2625216867506,10.9191267184401,11.9811243481575,10.007329835313,1.78784437770915,5.23403114460221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.572471974262113,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67175371061182,0.722878304769133,1.00267582127178,0.869079113764942,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8089173141853,1.42306505074684,1.33888245105868,0,0,1.46437234528902,0,0,0.535798369704479,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.496971951695318,1.39293562831038,0.132409180813219,0.286836620748814,0,3.36406560085384,0,0,0,0.404132016209064,0,0.605429710579726,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0,0,0,2.75839016219118,0.300476117813194,0.567160915800105,0,0,0.211931901159562,0,0,0,0.37223371266318,0,0.0974370051611986,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17931135228781,1.44375896333917,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0.122988438543114,0.857839051492628,0,0,0,0,0,0,1.44331342025273,0.115930404975077,3.28744343860301,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0.336393253036082,0.87192013766656,0.95339771567235,2.58543431515556,0,0,0.531876233169741,0,0.257207374262142,1.41849132023278,0,0.428933980974443,0,0,0,0,0,0,0,0.099972991182057,0,0,0,4.31324739884849,2.29723871668228,0,1.15825045334063,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,4.21783273291921,4.60385919864187,3.92924132206303,2.69092213436972,13.816095724801,1.60853921143608,0,0,0,0.0821271560138091,0,0,0.483437798366489,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,3.07740150139667,5.9042636225947,3.25378394664303,1.44257416306811,0,0,0,0,3.21367859688319,0.096670718292122,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=100128054 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=51bp_to_NR_033969,uc001kjo.1_5end | |||
|coexpression_cluster_id=C1602 | |||
|description=CAGE_peak_2_at_LOC100128054_5end | |||
|id=chr10:96046756..96046775,- | |||
|ontology_enrichment_celltype=CL:0000222!8.15e-09!119;CL:0000055!1.17e-07!180;CL:0000213!6.02e-07!57;CL:0000215!6.02e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002590;1.48e-11;3!CL:0002580;2.37e-11;3!CL:0002586;2.59e-11;3!CL:0002615;2.92e-11;3!CL:0002579;7.32e-11;3!CL:0002541;1.48e-10;3!CL:0000349;6.25e-10;19!CL:0002334;6.99e-10;12!CL:0000136;1.78e-09;13!CL:0000149;1.40e-08;4!CL:0002617;1.46e-08;2!CL:0002561;1.12e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002590,1.59e-11,3;CL:0002580,2.03e-11,3;CL:0002615,2.18e-11,3;CL:0002586,2.97e-11,3;CL:0002579,5.32e-11,3;CL:0002541,1.50e-10,3;CL:0002334,5.59e-10,12;CL:0000349,6.10e-10,19;CL:0002617,1.47e-08,2;CL:0000149,1.55e-08,4;CL:0000136,3.76e-08,15;CL:0002561,1.18e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!1.59e-11!57;UBERON:0003688!3.28e-10!6;UBERON:0002358!3.28e-10!6;UBERON:0003684!3.28e-10!6;UBERON:0001178!3.28e-10!6;UBERON:0000478!2.33e-09!24;UBERON:0005631!5.67e-09!14;UBERON:0000158!5.67e-09!14;UBERON:0002049!3.94e-08!79;UBERON:0007798!3.94e-08!79;UBERON:0003124!9.91e-08!7;UBERON:0007625!1.47e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.17e-20;6!UBERON:0002358;2.17e-20;6!UBERON:0003684;2.17e-20;6!UBERON:0001178;2.17e-20;6!UBERON:0004457;2.32e-13;9!UBERON:0000042;2.32e-13;9!UBERON:0000478;5.91e-12;24!UBERON:0000966;1.94e-11;5!UBERON:0005388;1.94e-11;5!UBERON:0001802;1.94e-11;5!UBERON:0001781;2.59e-11;3!UBERON:0001782;2.59e-11;3!UBERON:0003124;1.48e-10;3!UBERON:0000920;1.48e-10;3!UBERON:0000310;6.76e-09;10!UBERON:0003104;4.19e-08;7!UBERON:0009142;4.19e-08;7!UBERON:0001443;4.75e-08;11!UBERON:0005933;1.12e-07;2!UBERON:0005942;1.12e-07;2!UBERON:0005932;1.12e-07;2!UBERON:0007625;1.30e-07;11!UBERON:0001456;4.34e-07;21!UBERON:0005284;4.50e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.18e-20,6;UBERON:0002358,1.18e-20,6;UBERON:0003684,1.18e-20,6;UBERON:0001178,1.18e-20,6;UBERON:0000478,5.96e-12,24;UBERON:0003124,9.80e-12,7;UBERON:0001782,2.97e-11,3;UBERON:0005424,2.97e-11,3;UBERON:0000920,1.50e-10,3;UBERON:0004457,5.77e-10,12;UBERON:0000042,5.77e-10,12;UBERON:0000966,1.75e-09,6;UBERON:0005388,1.75e-09,6;UBERON:0001802,1.75e-09,6;UBERON:0004923,2.58e-09,66;UBERON:0000310,6.28e-09,10;UBERON:0001781,1.55e-08,4;UBERON:0001443,4.45e-08,11;UBERON:0005631,5.67e-08,14;UBERON:0000158,5.67e-08,14;UBERON:0005933,1.18e-07,2;UBERON:0005942,1.18e-07,2;UBERON:0005932,1.18e-07,2;UBERON:0007625,1.39e-07,11;UBERON:0005284,4.69e-07,5 | |||
|phase1_expression=13.2625216867506,10.9191267184401,11.9811243481575,10.007329835313,1.78784437770915,5.23403114460221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.572471974262113,0,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.67175371061182,0.722878304769133,1.00267582127178,0.869079113764942,0,0.486634870302636,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8089173141853,1.42306505074684,1.33888245105868,0,0,1.46437234528902,0,0,0.535798369704479,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.496971951695318,1.39293562831038,0.132409180813219,0.286836620748814,0,3.36406560085384,0,0,0,0.404132016209064,0,0.605429710579726,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0.718618141816238,0,0,0,0,2.75839016219118,0.300476117813194,0.567160915800105,0,0,0.211931901159562,0,0,0,0.37223371266318,0,0.0974370051611986,0,0,0.323292113637624,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17931135228781,1.44375896333917,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0.122988438543114,0.857839051492628,0,0,0,0,0,0,1.44331342025273,0.115930404975077,3.28744343860301,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411309970813294,0,0,0.336393253036082,0.87192013766656,0.95339771567235,2.58543431515556,0,0,0.531876233169741,0,0.257207374262142,1.41849132023278,0,0.428933980974443,0,0,0,0,0,0,0,0.099972991182057,0,0,0,4.31324739884849,2.29723871668228,0,1.15825045334063,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,4.21783273291921,4.60385919864187,3.92924132206303,2.69092213436972,13.816095724801,1.60853921143608,0,0,0,0.0821271560138091,0,0,0.483437798366489,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,3.07740150139667,5.9042636225947,3.25378394664303,1.44257416306811,0,0,0,0,3.21367859688319,0.096670718292122,0,0,0.551346289938122,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0.143124886741991,4.09374206295634,5.37845022021834,4.38449446024797,0,0,0,0,0,0,0.117812402345686,0,1.58510321173008,0,0.48763373908959,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0.563391205064483,0.143411352204052,1.57198465620994,0,0,0.633322905892992,0,0,0.349934720244983,0,0,0,2.54188262097304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95497793895076,2.37571744666111,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0.933118762985422,0,0,0,0,0,8.89095921157095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,0.0897576444097721,0,3.50901275705111,1.4655614944298,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36484205787483,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20008329398946,0.343395705182793,0,0,0,2.35885750512418,0,0.453411851024545,0,0.244736704506468,0,4.94082315457555,0.438568099157414,0,0,0,0,23.8346935794527,1.21543982470953,0,0,0,0,0,0,0,0,0,0,2.83757976783418,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,4.23211132428821,0.6124909547064,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,2.78412259767164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37069006618028,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,2.50167904618297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p2@LOC100128054 | |||
}} |
Revision as of 15:04, 10 September 2013
Short description: | p2@LOC100128054 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LOC100128054_5end |
Coexpression cluster: | C1602_mesothelioma_Adipocyte_Preadipocyte_bone_Smooth_papillary_Cardiac |
Association with transcript: | 51bp_to_NR_033969, uc001kjo.1_5end |
EntrezGene: | LOC100128054 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brain vasculature | 1.59e-11 | 3 |
preadipocyte of the breast | 2.03e-11 | 3 |
adipocyte of omentum tissue | 2.18e-11 | 3 |
retinal pigment epithelial cell | 2.97e-11 | 3 |
omentum preadipocyte | 5.32e-11 | 3 |
chorionic membrane mesenchymal stem cell | 1.50e-10 | 3 |
preadipocyte | 5.59e-10 | 12 |
extraembryonic cell | 6.10e-10 | 19 |
adipocyte of breast | 1.47e-08 | 2 |
visual pigment cell | 1.55e-08 | 4 |
fat cell | 3.76e-08 | 15 |
outer root sheath cell | 1.18e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.18e-20 | 6 |
peritoneum | 1.18e-20 | 6 |
abdominal cavity | 1.18e-20 | 6 |
visceral peritoneum | 1.18e-20 | 6 |
extraembryonic structure | 5.96e-12 | 24 |
chorion | 9.80e-12 | 7 |
pigmented layer of retina | 2.97e-11 | 3 |
presumptive retinal pigmented epithelium | 2.97e-11 | 3 |
egg chorion | 1.50e-10 | 3 |
cavity lining | 5.77e-10 | 12 |
serous membrane | 5.77e-10 | 12 |
retina | 1.75e-09 | 6 |
photoreceptor array | 1.75e-09 | 6 |
posterior segment of eyeball | 1.75e-09 | 6 |
organ component layer | 2.58e-09 | 66 |
breast | 6.28e-09 | 10 |
layer of retina | 1.55e-08 | 4 |
chest | 4.45e-08 | 11 |
extraembryonic membrane | 5.67e-08 | 14 |
membranous layer | 5.67e-08 | 14 |
hair root sheath | 1.18e-07 | 2 |
hair outer root sheath | 1.18e-07 | 2 |
bulb of hair follicle | 1.18e-07 | 2 |
pigment epithelium of eye | 1.39e-07 | 11 |
brain vasculature | 4.69e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.