FFCP PHASE1:Hg19::chr10:95360762..95360785,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5950|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=9922|TSSclassifier=W|UniProt=|association_with_transcript=-276bp_to_ENST00000471333_5end|coexpression_cluster_id=C5|description=CAGE_peak_4_at_RBP4_5end|id=chr10:95360762..95360785,-|ontology_enrichment_celltype=CL:0000136!1.10e-10!15;CL:0000135!3.23e-07!3;CL:0000386!3.23e-07!3;CL:0000388!3.23e-07!3|ontology_enrichment_celltype_v019=CL:0000136;4.31e-33;13!CL:0000182;1.69e-20;12!CL:0002521;2.47e-10;3!CL:0000135;4.62e-10;3!CL:0000388;4.62e-10;3|ontology_enrichment_celltype_v019_2=CL:0000136,1.71e-28,15;CL:0000182,1.84e-20,12;CL:0002521,2.47e-10,3;CL:0000135,4.31e-10,3;CL:0000388,4.31e-10,3|ontology_enrichment_development_v019=UBERON:0004161;1.25e-15;11!UBERON:0009497;3.37e-13;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.13e-22!57;UBERON:0005068!1.13e-22!57;UBERON:0006241!1.13e-22!57;UBERON:0007135!1.13e-22!57;UBERON:0003080!6.39e-21!42;UBERON:0007023!6.95e-21!115;UBERON:0000955!4.79e-20!69;UBERON:0006238!4.79e-20!69;UBERON:0002616!6.58e-20!59;UBERON:0005743!1.43e-19!86;UBERON:0001017!1.53e-19!82;UBERON:0002780!1.74e-19!41;UBERON:0001890!1.74e-19!41;UBERON:0006240!1.74e-19!41;UBERON:0001893!6.82e-18!34;UBERON:0002020!8.30e-18!34;UBERON:0003528!8.30e-18!34;UBERON:0001869!1.79e-17!32;UBERON:0003075!5.54e-17!86;UBERON:0007284!5.54e-17!86;UBERON:0000073!8.39e-17!94;UBERON:0001016!8.39e-17!94;UBERON:0002791!1.63e-16!33;UBERON:0002619!1.81e-16!22;UBERON:0002346!8.12e-16!90;UBERON:0001950!1.04e-15!20;UBERON:0000956!4.27e-14!25;UBERON:0000203!4.27e-14!25;UBERON:0003056!1.01e-13!61;UBERON:0000033!3.93e-09!123;UBERON:0000153!5.00e-09!129;UBERON:0007811!5.00e-09!129;UBERON:0001871!7.36e-09!7;UBERON:0002298!7.70e-08!8;UBERON:0000025!1.55e-07!194;UBERON:0000043!3.23e-07!3;UBERON:0000349!3.68e-07!5;UBERON:0004905!7.85e-07!5;UBERON:0000982!7.85e-07!5;UBERON:0004770!7.85e-07!5|ontology_enrichment_uberon_v019=UBERON:0002107;1.15e-22;19!UBERON:0006925;1.15e-22;19!UBERON:0002368;1.24e-17;33!UBERON:0002423;5.85e-17;25!UBERON:0000007;2.22e-14;2!UBERON:0002365;5.45e-13;31!UBERON:0002330;5.45e-13;31!UBERON:0000949;2.56e-11;43!UBERON:0002190;2.47e-10;3!UBERON:0007846;4.62e-10;3!UBERON:0000043;4.62e-10;3!UBERON:0007845;4.62e-10;3!UBERON:0003296;1.24e-07;4!UBERON:0010133;1.24e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.24e-22,19;UBERON:0006925,1.24e-22,19;UBERON:0008836,1.24e-22,19;UBERON:0008835,2.14e-19,22;UBERON:0003894,2.14e-19,22;UBERON:0009854,1.66e-18,23;UBERON:0002368,3.33e-18,35;UBERON:0007499,6.18e-17,25;UBERON:0009497,6.18e-17,25;UBERON:0000015,6.18e-17,25;UBERON:0002423,6.18e-17,25;UBERON:0006235,6.18e-17,25;UBERON:0004161,6.18e-17,25;UBERON:0009856,3.06e-16,26;UBERON:0000007,2.55e-14,2;UBERON:0000949,8.73e-14,45;UBERON:0002365,1.94e-13,31;UBERON:0002330,1.94e-13,31;UBERON:0002190,2.47e-10,3;UBERON:0002530,4.08e-10,59;UBERON:0007846,4.31e-10,3;UBERON:0000043,4.31e-10,3;UBERON:0007845,4.31e-10,3;UBERON:0003929,4.51e-09,54;UBERON:0002417,4.93e-08,60;UBERON:0000916,4.93e-08,60;UBERON:0003296,1.33e-07,4;UBERON:0010133,1.33e-07,4;UBERON:0005172,3.12e-07,54;UBERON:0005173,3.12e-07,54|phase1_expression=0,2.35510576280081,0.281908808191942,0,1.34088328328186,0,2.53299878168311,0,3.3954131665979,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.6318125358591,18.6737171168749,11.2250082269467,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50339439602256,0.27470839445503,0.247528499761764,0,0,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74439925886963,0.658589785919804,0,0,0,0,0,5.27205284349963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,2.98244294329889,0.422008249231538,0,0,0,0.19924798825107,0.552567831062295,0.503865495708552,0,0,0,0,0,0,0,0,0,1.93866549219044,0.463840490809256,1.99613798001194,0,0,1.44999915086959,0,0,0,0,0,0,0,0.60298219312704,0,0,0,0.87754158861589,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.16323280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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5950 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9922 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-276bp_to_ENST00000471333_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_RBP4_5end | |||
|id=chr10:95360762..95360785,- | |||
|ontology_enrichment_celltype=CL:0000136!1.10e-10!15;CL:0000135!3.23e-07!3;CL:0000386!3.23e-07!3;CL:0000388!3.23e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.31e-33;13!CL:0000182;1.69e-20;12!CL:0002521;2.47e-10;3!CL:0000135;4.62e-10;3!CL:0000388;4.62e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.71e-28,15;CL:0000182,1.84e-20,12;CL:0002521,2.47e-10,3;CL:0000135,4.31e-10,3;CL:0000388,4.31e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.25e-15;11!UBERON:0009497;3.37e-13;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.13e-22!57;UBERON:0005068!1.13e-22!57;UBERON:0006241!1.13e-22!57;UBERON:0007135!1.13e-22!57;UBERON:0003080!6.39e-21!42;UBERON:0007023!6.95e-21!115;UBERON:0000955!4.79e-20!69;UBERON:0006238!4.79e-20!69;UBERON:0002616!6.58e-20!59;UBERON:0005743!1.43e-19!86;UBERON:0001017!1.53e-19!82;UBERON:0002780!1.74e-19!41;UBERON:0001890!1.74e-19!41;UBERON:0006240!1.74e-19!41;UBERON:0001893!6.82e-18!34;UBERON:0002020!8.30e-18!34;UBERON:0003528!8.30e-18!34;UBERON:0001869!1.79e-17!32;UBERON:0003075!5.54e-17!86;UBERON:0007284!5.54e-17!86;UBERON:0000073!8.39e-17!94;UBERON:0001016!8.39e-17!94;UBERON:0002791!1.63e-16!33;UBERON:0002619!1.81e-16!22;UBERON:0002346!8.12e-16!90;UBERON:0001950!1.04e-15!20;UBERON:0000956!4.27e-14!25;UBERON:0000203!4.27e-14!25;UBERON:0003056!1.01e-13!61;UBERON:0000033!3.93e-09!123;UBERON:0000153!5.00e-09!129;UBERON:0007811!5.00e-09!129;UBERON:0001871!7.36e-09!7;UBERON:0002298!7.70e-08!8;UBERON:0000025!1.55e-07!194;UBERON:0000043!3.23e-07!3;UBERON:0000349!3.68e-07!5;UBERON:0004905!7.85e-07!5;UBERON:0000982!7.85e-07!5;UBERON:0004770!7.85e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.15e-22;19!UBERON:0006925;1.15e-22;19!UBERON:0002368;1.24e-17;33!UBERON:0002423;5.85e-17;25!UBERON:0000007;2.22e-14;2!UBERON:0002365;5.45e-13;31!UBERON:0002330;5.45e-13;31!UBERON:0000949;2.56e-11;43!UBERON:0002190;2.47e-10;3!UBERON:0007846;4.62e-10;3!UBERON:0000043;4.62e-10;3!UBERON:0007845;4.62e-10;3!UBERON:0003296;1.24e-07;4!UBERON:0010133;1.24e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.24e-22,19;UBERON:0006925,1.24e-22,19;UBERON:0008836,1.24e-22,19;UBERON:0008835,2.14e-19,22;UBERON:0003894,2.14e-19,22;UBERON:0009854,1.66e-18,23;UBERON:0002368,3.33e-18,35;UBERON:0007499,6.18e-17,25;UBERON:0009497,6.18e-17,25;UBERON:0000015,6.18e-17,25;UBERON:0002423,6.18e-17,25;UBERON:0006235,6.18e-17,25;UBERON:0004161,6.18e-17,25;UBERON:0009856,3.06e-16,26;UBERON:0000007,2.55e-14,2;UBERON:0000949,8.73e-14,45;UBERON:0002365,1.94e-13,31;UBERON:0002330,1.94e-13,31;UBERON:0002190,2.47e-10,3;UBERON:0002530,4.08e-10,59;UBERON:0007846,4.31e-10,3;UBERON:0000043,4.31e-10,3;UBERON:0007845,4.31e-10,3;UBERON:0003929,4.51e-09,54;UBERON:0002417,4.93e-08,60;UBERON:0000916,4.93e-08,60;UBERON:0003296,1.33e-07,4;UBERON:0010133,1.33e-07,4;UBERON:0005172,3.12e-07,54;UBERON:0005173,3.12e-07,54 | |||
|phase1_expression=0,2.35510576280081,0.281908808191942,0,1.34088328328186,0,2.53299878168311,0,3.3954131665979,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724232594804119,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.6318125358591,18.6737171168749,11.2250082269467,0,1.10689594688802,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50339439602256,0.27470839445503,0.247528499761764,0,0,0,0,0,0,0,0,0.145016693914229,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74439925886963,0.658589785919804,0,0,0,0,0,5.27205284349963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,2.98244294329889,0.422008249231538,0,0,0,0.19924798825107,0.552567831062295,0.503865495708552,0,0,0,0,0,0,0,0,0,1.93866549219044,0.463840490809256,1.99613798001194,0,0,1.44999915086959,0,0,0,0,0,0,0,0.60298219312704,0,0,0,0.87754158861589,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0.442306057399416,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.949661939338181,0.195551382734803,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,1.73323001075892,1.40106959247983,1.3480708770837,0,0,3.18091875923721,0,0,0,0,0,0,0.485996453264197,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,13.9224621994178,21.2011022259554,0.129282956361551,0.26446520348538,0,0,0.106787412567695,0,0,0,0,0,0,3.26410682021684,1.5041393641362,3.67614692116154,4.26234419922746,0,0,0.854183854313742,0.250381861413,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0.41023272848151,0.504143392443436,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0.675375846183947,0,0.206686796501184,0.443910671357348,0,0,0,0,0,0,0,1.82089681270989,1.13831095675649,0,0,0,0.203909198930495,0.657727735628491,0,0.111231401892069,0,0.628462359664008,0,0.913158720509496,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.559277158988962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0.169927114687817,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.951880862672806,0,0,0.371995018166751,1.84870251452567,2.16313281061895,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0.0814032686109745,0,0,0.179650404213174,0,0,0,0,0,0 | |||
|short_description=p4@RBP4 | |||
}} |
Revision as of 15:03, 10 September 2013
Short description: | p4@RBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_RBP4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -276bp_to_ENST00000471333_5end |
EntrezGene: | RBP4 |
HGNC: | 9922 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.71e-28 | 15 |
hepatocyte | 1.84e-20 | 12 |
subcutaneous fat cell | 2.47e-10 | 3 |
fibrocyte | 4.31e-10 | 3 |
tendon cell | 4.31e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 1.24e-22 | 19 |
digestive gland | 1.24e-22 | 19 |
liver bud | 1.24e-22 | 19 |
hepatic diverticulum | 2.14e-19 | 22 |
liver primordium | 2.14e-19 | 22 |
digestive tract diverticulum | 1.66e-18 | 23 |
endocrine gland | 3.33e-18 | 35 |
epithelial sac | 6.18e-17 | 25 |
epithelium of foregut-midgut junction | 6.18e-17 | 25 |
anatomical boundary | 6.18e-17 | 25 |
hepatobiliary system | 6.18e-17 | 25 |
foregut-midgut junction | 6.18e-17 | 25 |
septum transversum | 6.18e-17 | 25 |
sac | 3.06e-16 | 26 |
pituitary gland | 2.55e-14 | 2 |
endocrine system | 8.73e-14 | 45 |
exocrine gland | 1.94e-13 | 31 |
exocrine system | 1.94e-13 | 31 |
subcutaneous adipose tissue | 2.47e-10 | 3 |
gland | 4.08e-10 | 59 |
dense regular connective tissue | 4.31e-10 | 3 |
tendon | 4.31e-10 | 3 |
regular connective tissue | 4.31e-10 | 3 |
gut epithelium | 4.51e-09 | 54 |
abdominal segment of trunk | 4.93e-08 | 60 |
abdomen | 4.93e-08 | 60 |
gland of diencephalon | 1.33e-07 | 4 |
neuroendocrine gland | 1.33e-07 | 4 |
abdomen element | 3.12e-07 | 54 |
abdominal segment element | 3.12e-07 | 54 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.