FFCP PHASE1:Hg19::chr10:95360446..95360509,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5950|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=9922|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000471333_5end|coexpression_cluster_id=C5|description=CAGE_peak_3_at_RBP4_5end|id=chr10:95360446..95360509,-|ontology_enrichment_celltype=CL:0000136!3.01e-17!15;CL:0000135!7.54e-09!3;CL:0000386!7.54e-09!3;CL:0000388!7.54e-09!3;CL:0002615!9.57e-09!3;CL:0000181!3.01e-08!12;CL:0000417!3.01e-08!12;CL:0000668!3.01e-08!12;CL:0000414!3.01e-08!12;CL:0000412!3.01e-08!12;CL:0000182!3.01e-08!12|ontology_enrichment_celltype_v019=CL:0000136;4.93e-37;13!CL:0000182;7.84e-23;12!CL:0002521;1.88e-11;3|ontology_enrichment_celltype_v019_2=CL:0000136,7.20e-32,15;CL:0000182,7.00e-23,12;CL:0002521,1.94e-11,3;CL:0000223,1.92e-07,58|ontology_enrichment_development_v019=UBERON:0004161;1.98e-17;11!UBERON:0009497;9.93e-15;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.15e-15!115;UBERON:0003080!1.79e-12!42;UBERON:0002780!3.74e-11!41;UBERON:0001890!3.74e-11!41;UBERON:0006240!3.74e-11!41;UBERON:0000369!2.72e-10!4;UBERON:0002435!2.72e-10!4;UBERON:0000204!2.72e-10!4;UBERON:0010082!2.72e-10!4;UBERON:0001869!1.90e-09!32;UBERON:0000043!7.54e-09!3;UBERON:0001893!9.51e-09!34;UBERON:0002107!1.20e-08!19;UBERON:0006925!1.20e-08!19;UBERON:0008836!1.20e-08!19;UBERON:0003056!1.85e-08!61;UBERON:0005383!3.16e-08!3;UBERON:0005382!3.16e-08!3;UBERON:0001049!3.24e-08!57;UBERON:0005068!3.24e-08!57;UBERON:0006241!3.24e-08!57;UBERON:0007135!3.24e-08!57;UBERON:0003075!3.43e-08!86;UBERON:0007284!3.43e-08!86;UBERON:0002616!8.14e-08!59;UBERON:0003929!9.41e-08!54;UBERON:0002791!1.06e-07!33;UBERON:0009497!1.18e-07!25;UBERON:0000015!1.18e-07!25;UBERON:0002423!1.18e-07!25;UBERON:0006235!1.18e-07!25;UBERON:0004161!1.18e-07!25;UBERON:0002346!1.30e-07!90;UBERON:0002368!1.38e-07!35;UBERON:0002020!2.06e-07!34;UBERON:0003528!2.06e-07!34;UBERON:0008835!2.96e-07!22;UBERON:0003894!2.96e-07!22;UBERON:0005743!4.29e-07!86;UBERON:0009854!7.15e-07!23;UBERON:0001017!8.15e-07!82;UBERON:0002420!8.17e-07!9;UBERON:0007245!8.17e-07!9;UBERON:0010009!8.17e-07!9;UBERON:0010011!8.17e-07!9;UBERON:0000454!8.17e-07!9|ontology_enrichment_uberon_v019=UBERON:0002107;2.58e-25;19!UBERON:0006925;2.58e-25;19!UBERON:0002368;8.35e-20;33!UBERON:0002423;5.44e-19;25!UBERON:0000007;5.98e-16;2!UBERON:0002365;1.42e-14;31!UBERON:0002330;1.42e-14;31!UBERON:0000949;1.04e-12;43!UBERON:0002190;1.88e-11;3!UBERON:0003296;1.98e-08;4!UBERON:0010133;1.98e-08;4!UBERON:0002530;2.24e-08;57!UBERON:0002072;3.30e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.34e-25,19;UBERON:0006925,2.34e-25,19;UBERON:0008836,2.34e-25,19;UBERON:0008835,9.29e-22,22;UBERON:0003894,9.29e-22,22;UBERON:0009854,9.11e-21,23;UBERON:0002368,1.44e-20,35;UBERON:0007499,5.07e-19,25;UBERON:0009497,5.07e-19,25;UBERON:0000015,5.07e-19,25;UBERON:0002423,5.07e-19,25;UBERON:0006235,5.07e-19,25;UBERON:0004161,5.07e-19,25;UBERON:0009856,3.00e-18,26;UBERON:0000007,5.55e-16,2;UBERON:0000949,1.22e-15,45;UBERON:0002365,3.92e-15,31;UBERON:0002330,3.92e-15,31;UBERON:0002530,5.40e-14,59;UBERON:0003929,8.78e-13,54;UBERON:0002190,1.94e-11,3;UBERON:0002417,3.73e-09,60;UBERON:0000916,3.73e-09,60;UBERON:0003296,1.91e-08,4;UBERON:0010133,1.91e-08,4;UBERON:0005172,3.19e-08,54;UBERON:0005173,3.19e-08,54;UBERON:0005911,7.25e-08,82;UBERON:0002072,3.36e-07,5|phase1_expression=0,3.8538094300377,0.281908808191942,1.0007329835313,0.446961094427288,0,7.59899634504932,0,3.3954131665979,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,72.2503698484436,19.6565443335525,13.5881678536723,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.17065003664728,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53329162357197,0,0,0,0,0,0,10.7323932885528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0.438770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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5950 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9922 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000471333_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_RBP4_5end | |||
|id=chr10:95360446..95360509,- | |||
|ontology_enrichment_celltype=CL:0000136!3.01e-17!15;CL:0000135!7.54e-09!3;CL:0000386!7.54e-09!3;CL:0000388!7.54e-09!3;CL:0002615!9.57e-09!3;CL:0000181!3.01e-08!12;CL:0000417!3.01e-08!12;CL:0000668!3.01e-08!12;CL:0000414!3.01e-08!12;CL:0000412!3.01e-08!12;CL:0000182!3.01e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.93e-37;13!CL:0000182;7.84e-23;12!CL:0002521;1.88e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.20e-32,15;CL:0000182,7.00e-23,12;CL:0002521,1.94e-11,3;CL:0000223,1.92e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.98e-17;11!UBERON:0009497;9.93e-15;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.15e-15!115;UBERON:0003080!1.79e-12!42;UBERON:0002780!3.74e-11!41;UBERON:0001890!3.74e-11!41;UBERON:0006240!3.74e-11!41;UBERON:0000369!2.72e-10!4;UBERON:0002435!2.72e-10!4;UBERON:0000204!2.72e-10!4;UBERON:0010082!2.72e-10!4;UBERON:0001869!1.90e-09!32;UBERON:0000043!7.54e-09!3;UBERON:0001893!9.51e-09!34;UBERON:0002107!1.20e-08!19;UBERON:0006925!1.20e-08!19;UBERON:0008836!1.20e-08!19;UBERON:0003056!1.85e-08!61;UBERON:0005383!3.16e-08!3;UBERON:0005382!3.16e-08!3;UBERON:0001049!3.24e-08!57;UBERON:0005068!3.24e-08!57;UBERON:0006241!3.24e-08!57;UBERON:0007135!3.24e-08!57;UBERON:0003075!3.43e-08!86;UBERON:0007284!3.43e-08!86;UBERON:0002616!8.14e-08!59;UBERON:0003929!9.41e-08!54;UBERON:0002791!1.06e-07!33;UBERON:0009497!1.18e-07!25;UBERON:0000015!1.18e-07!25;UBERON:0002423!1.18e-07!25;UBERON:0006235!1.18e-07!25;UBERON:0004161!1.18e-07!25;UBERON:0002346!1.30e-07!90;UBERON:0002368!1.38e-07!35;UBERON:0002020!2.06e-07!34;UBERON:0003528!2.06e-07!34;UBERON:0008835!2.96e-07!22;UBERON:0003894!2.96e-07!22;UBERON:0005743!4.29e-07!86;UBERON:0009854!7.15e-07!23;UBERON:0001017!8.15e-07!82;UBERON:0002420!8.17e-07!9;UBERON:0007245!8.17e-07!9;UBERON:0010009!8.17e-07!9;UBERON:0010011!8.17e-07!9;UBERON:0000454!8.17e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.58e-25;19!UBERON:0006925;2.58e-25;19!UBERON:0002368;8.35e-20;33!UBERON:0002423;5.44e-19;25!UBERON:0000007;5.98e-16;2!UBERON:0002365;1.42e-14;31!UBERON:0002330;1.42e-14;31!UBERON:0000949;1.04e-12;43!UBERON:0002190;1.88e-11;3!UBERON:0003296;1.98e-08;4!UBERON:0010133;1.98e-08;4!UBERON:0002530;2.24e-08;57!UBERON:0002072;3.30e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.34e-25,19;UBERON:0006925,2.34e-25,19;UBERON:0008836,2.34e-25,19;UBERON:0008835,9.29e-22,22;UBERON:0003894,9.29e-22,22;UBERON:0009854,9.11e-21,23;UBERON:0002368,1.44e-20,35;UBERON:0007499,5.07e-19,25;UBERON:0009497,5.07e-19,25;UBERON:0000015,5.07e-19,25;UBERON:0002423,5.07e-19,25;UBERON:0006235,5.07e-19,25;UBERON:0004161,5.07e-19,25;UBERON:0009856,3.00e-18,26;UBERON:0000007,5.55e-16,2;UBERON:0000949,1.22e-15,45;UBERON:0002365,3.92e-15,31;UBERON:0002330,3.92e-15,31;UBERON:0002530,5.40e-14,59;UBERON:0003929,8.78e-13,54;UBERON:0002190,1.94e-11,3;UBERON:0002417,3.73e-09,60;UBERON:0000916,3.73e-09,60;UBERON:0003296,1.91e-08,4;UBERON:0010133,1.91e-08,4;UBERON:0005172,3.19e-08,54;UBERON:0005173,3.19e-08,54;UBERON:0005911,7.25e-08,82;UBERON:0002072,3.36e-07,5 | |||
|phase1_expression=0,3.8538094300377,0.281908808191942,1.0007329835313,0.446961094427288,0,7.59899634504932,0,3.3954131665979,0,0,0,0,0,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,72.2503698484436,19.6565443335525,13.5881678536723,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.17065003664728,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53329162357197,0,0,0,0,0,0,10.7323932885528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0,0,0,0,0,0,1.57566364614447,1.64831716762333,1.21326378937533,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.1293872853905,23.8512400041998,0,0,0,0,0.213574825135389,0,0,0,0,0,0,3.80812462358632,2.0055191521816,4.90152922821539,3.27872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.317079050969534,0,0,0.496211178389294,0,0,0,0,1.21393120847326,1.59363533945908,0,0,0,0,0.0657727735628491,0,0.111231401892069,0.078493092850514,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,1.5870805215462,0.371995018166751,0.462175628631418,1.29787968637137,0,0,0,0,0,0,0,0.378893491091197,0,0,0,0.213233981900981,0,0,0,0,0,0.202117188958219,0,0,0,0.215166616178029,0,0,0,0,0.0898252021065869,0,0,0,0,1.20764276154616,0 | |||
|short_description=p3@RBP4 | |||
}} |
Revision as of 15:03, 10 September 2013
Short description: | p3@RBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_RBP4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000471333_5end |
EntrezGene: | RBP4 |
HGNC: | 9922 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.20e-32 | 15 |
hepatocyte | 7.00e-23 | 12 |
subcutaneous fat cell | 1.94e-11 | 3 |
endodermal cell | 1.92e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.34e-25 | 19 |
digestive gland | 2.34e-25 | 19 |
liver bud | 2.34e-25 | 19 |
hepatic diverticulum | 9.29e-22 | 22 |
liver primordium | 9.29e-22 | 22 |
digestive tract diverticulum | 9.11e-21 | 23 |
endocrine gland | 1.44e-20 | 35 |
epithelial sac | 5.07e-19 | 25 |
epithelium of foregut-midgut junction | 5.07e-19 | 25 |
anatomical boundary | 5.07e-19 | 25 |
hepatobiliary system | 5.07e-19 | 25 |
foregut-midgut junction | 5.07e-19 | 25 |
septum transversum | 5.07e-19 | 25 |
sac | 3.00e-18 | 26 |
pituitary gland | 5.55e-16 | 2 |
endocrine system | 1.22e-15 | 45 |
exocrine gland | 3.92e-15 | 31 |
exocrine system | 3.92e-15 | 31 |
gland | 5.40e-14 | 59 |
gut epithelium | 8.78e-13 | 54 |
subcutaneous adipose tissue | 1.94e-11 | 3 |
abdominal segment of trunk | 3.73e-09 | 60 |
abdomen | 3.73e-09 | 60 |
gland of diencephalon | 1.91e-08 | 4 |
neuroendocrine gland | 1.91e-08 | 4 |
abdomen element | 3.19e-08 | 54 |
abdominal segment element | 3.19e-08 | 54 |
endo-epithelium | 7.25e-08 | 82 |
hypodermis | 3.36e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.