FFCP PHASE1:Hg19::chr10:10548662..10548664,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_at_chr10:10548662..10548664,+ | |||
|id=chr10:10548662..10548664,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.62e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!1.46e-87!34;UBERON:0001869!1.20e-85!32;UBERON:0002780!5.82e-85!41;UBERON:0001890!5.82e-85!41;UBERON:0006240!5.82e-85!41;UBERON:0003080!7.30e-83!42;UBERON:0002791!1.15e-82!33;UBERON:0002020!3.00e-80!34;UBERON:0003528!3.00e-80!34;UBERON:0002619!3.53e-76!22;UBERON:0001950!1.15e-74!20;UBERON:0001049!6.51e-70!57;UBERON:0005068!6.51e-70!57;UBERON:0006241!6.51e-70!57;UBERON:0007135!6.51e-70!57;UBERON:0002616!2.13e-67!59;UBERON:0000956!6.09e-67!25;UBERON:0000203!6.09e-67!25;UBERON:0000955!2.25e-65!69;UBERON:0006238!2.25e-65!69;UBERON:0001017!2.30e-58!82;UBERON:0003056!7.63e-56!61;UBERON:0005743!1.91e-55!86;UBERON:0003075!4.73e-52!86;UBERON:0007284!4.73e-52!86;UBERON:0000073!9.35e-50!94;UBERON:0001016!9.35e-50!94;UBERON:0002346!1.65e-49!90;UBERON:0000033!3.19e-37!123;UBERON:0000153!3.03e-35!129;UBERON:0007811!3.03e-35!129;UBERON:0007023!5.95e-35!115;UBERON:0001871!7.15e-34!7;UBERON:0000200!2.55e-33!6;UBERON:0004121!1.82e-27!169;UBERON:0000924!1.05e-26!173;UBERON:0006601!1.05e-26!173;UBERON:0002420!9.08e-22!9;UBERON:0007245!9.08e-22!9;UBERON:0010009!9.08e-22!9;UBERON:0010011!9.08e-22!9;UBERON:0000454!9.08e-22!9;UBERON:0001872!9.49e-19!5;UBERON:0000025!2.36e-18!194;UBERON:0000349!2.45e-18!5;UBERON:0002771!1.70e-17!3;UBERON:0002308!4.46e-15!9;UBERON:0000125!4.46e-15!9;UBERON:0004111!1.20e-13!241;UBERON:0000369!3.78e-13!4;UBERON:0002435!3.78e-13!4;UBERON:0000204!3.78e-13!4;UBERON:0010082!3.78e-13!4;UBERON:0000064!4.91e-13!219;UBERON:0009663!7.83e-13!7;UBERON:0001870!1.41e-12!2;UBERON:0001876!2.35e-12!2;UBERON:0000477!1.32e-11!286;UBERON:0002021!8.86e-11!5;UBERON:0000483!2.56e-10!309;UBERON:0000119!3.68e-10!312;UBERON:0000475!1.21e-08!365;UBERON:0005383!2.60e-08!3;UBERON:0005382!2.60e-08!3;UBERON:0000988!5.42e-08!3;UBERON:0002022!3.57e-07!1;UBERON:0002702!3.78e-07!1;UBERON:0002134!4.78e-07!1;UBERON:0005208!4.78e-07!1;UBERON:0005946!4.78e-07!1;UBERON:0005965!4.78e-07!1;UBERON:0002078!4.78e-07!1;UBERON:0001882!5.06e-07!1;UBERON:0005403!5.06e-07!1;UBERON:0000062!5.27e-07!511;UBERON:0007190!5.37e-07!1;UBERON:0000481!6.30e-07!347;UBERON:0002581!7.57e-07!1;UBERON:0001874!8.02e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001872;2.02e-23;5!UBERON:0001950;5.95e-22;20!UBERON:0002619;4.24e-20;22!UBERON:0000956;7.51e-18;25!UBERON:0000203;7.51e-18;25!UBERON:0002791;7.94e-14;32!UBERON:0000922;8.21e-14;49!UBERON:0001869;1.22e-13;32!UBERON:0003528;1.48e-12;34!UBERON:0002020;1.48e-12;34!UBERON:0000955;2.07e-12;68!UBERON:0001893;2.86e-11;34!UBERON:0002114;7.42e-11;2!UBERON:0002780;3.40e-10;41!UBERON:0001890;3.40e-10;41!UBERON:0001017;5.01e-10;75!UBERON:0001016;5.94e-08;83!UBERON:0000073;2.69e-07;53!UBERON:0002616;2.69e-07;53!UBERON:0002108;5.08e-07;4!UBERON:0002021;5.08e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,2.54e-23,5;UBERON:0001950,6.81e-22,20;UBERON:0002619,4.80e-20,22;UBERON:0000956,8.37e-18,25;UBERON:0000203,8.37e-18,25;UBERON:0000955,8.98e-15,68;UBERON:0006238,8.98e-15,68;UBERON:0002791,3.78e-14,32;UBERON:0001869,3.78e-14,32;UBERON:0003528,2.26e-13,34;UBERON:0002020,2.26e-13,34;UBERON:0001893,2.26e-13,34;UBERON:0001017,1.68e-12,81;UBERON:0001016,2.66e-11,89;UBERON:0002780,3.14e-11,41;UBERON:0001890,3.14e-11,41;UBERON:0003080,3.14e-11,41;UBERON:0006240,3.14e-11,41;UBERON:0002114,7.42e-11,2;UBERON:0000073,7.74e-09,53;UBERON:0002616,7.74e-09,53;UBERON:0001049,2.14e-08,56;UBERON:0005068,2.14e-08,56;UBERON:0006241,2.14e-08,56;UBERON:0007135,2.14e-08,56;UBERON:0003056,9.42e-08,61;UBERON:0002108,5.08e-07,4;UBERON:0002021,5.38e-07,5 | |||
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|short_description=p@chr10:10548662..10548664,+ | |||
}} |
Revision as of 11:32, 10 September 2013
Short description: | p@chr10:10548662..10548664, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:10548662..10548664, + |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parietal lobe | 2.54e-23 | 5 |
neocortex | 6.81e-22 | 20 |
regional part of cerebral cortex | 4.80e-20 | 22 |
cerebral cortex | 8.37e-18 | 25 |
pallium | 8.37e-18 | 25 |
brain | 8.98e-15 | 68 |
future brain | 8.98e-15 | 68 |
regional part of telencephalon | 3.78e-14 | 32 |
cerebral hemisphere | 3.78e-14 | 32 |
brain grey matter | 2.26e-13 | 34 |
gray matter | 2.26e-13 | 34 |
telencephalon | 2.26e-13 | 34 |
central nervous system | 1.68e-12 | 81 |
nervous system | 2.66e-11 | 89 |
regional part of forebrain | 3.14e-11 | 41 |
forebrain | 3.14e-11 | 41 |
anterior neural tube | 3.14e-11 | 41 |
future forebrain | 3.14e-11 | 41 |
duodenum | 7.42e-11 | 2 |
regional part of nervous system | 7.74e-09 | 53 |
regional part of brain | 7.74e-09 | 53 |
neural tube | 2.14e-08 | 56 |
neural rod | 2.14e-08 | 56 |
future spinal cord | 2.14e-08 | 56 |
neural keel | 2.14e-08 | 56 |
pre-chordal neural plate | 9.42e-08 | 61 |
small intestine | 5.08e-07 | 4 |
occipital lobe | 5.38e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.