FFCP PHASE1:Hg19::chr1:236882190..236882202,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=88|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=164|TSSclassifier=S|UniProt=B7Z2N5|association_with_transcript=-19bp_to_AK294906_5end|coexpression_cluster_id=C20|description=CAGE_peak_4_at_ACTN2_5end|id=chr1:236882190..236882202,+|ontology_enrichment_celltype=CL:0000188!3.70e-07!9|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010226;1.31e-08;1!UBERON:0004874;1.88e-08;1!UBERON:0000358;2.02e-08;1!UBERON:0010227;2.42e-08;1!UBERON:0004140;3.57e-08;1!UBERON:0006222;5.62e-08;1!UBERON:0005425;5.62e-08;1!UBERON:0005062;7.56e-08;4!UBERON:0007284;7.56e-08;4|ontology_enrichment_disease=DOID:114!1.71e-07!2|ontology_enrichment_disease_v019=DOID:114;1.48e-15;2!DOID:178;1.57e-08;1!DOID:326;1.57e-08;1!DOID:3978;1.57e-08;1!DOID:3394;1.57e-08;1!DOID:5844;1.57e-08;1!DOID:1287;3.27e-08;4|ontology_enrichment_disease_v019_2=DOID:114,1.54e-15,2;DOID:178,1.63e-08,1;DOID:326,1.63e-08,1;DOID:3978,1.63e-08,1;DOID:3394,1.63e-08,1;DOID:5844,1.63e-08,1;DOID:1287,3.33e-08,4|ontology_enrichment_uberon=UBERON:0007023!3.15e-30!115;UBERON:0002346!3.45e-12!90;UBERON:0001049!9.51e-12!57;UBERON:0005068!9.51e-12!57;UBERON:0006241!9.51e-12!57;UBERON:0007135!9.51e-12!57;UBERON:0002780!9.62e-11!41;UBERON:0001890!9.62e-11!41;UBERON:0006240!9.62e-11!41;UBERON:0003080!2.05e-10!42;UBERON:0002791!2.49e-10!33;UBERON:0001893!5.93e-10!34;UBERON:0002020!6.03e-10!34;UBERON:0003528!6.03e-10!34;UBERON:0002616!6.53e-10!59;UBERON:0000924!2.09e-09!173;UBERON:0006601!2.09e-09!173;UBERON:0003075!2.38e-09!86;UBERON:0007284!2.38e-09!86;UBERON:0000073!9.81e-09!94;UBERON:0001016!9.81e-09!94;UBERON:0001017!1.12e-08!82;UBERON:0005743!4.58e-08!86;UBERON:0000955!9.55e-08!69;UBERON:0006238!9.55e-08!69;UBERON:0001869!1.55e-07!32;UBERON:0001630!1.66e-07!2;UBERON:0005090!1.66e-07!2;UBERON:0004121!2.00e-07!169;UBERON:0002308!2.91e-07!9;UBERON:0000125!2.91e-07!9;UBERON:0000341!2.95e-07!2;UBERON:0001950!7.19e-07!20|ontology_enrichment_uberon_v019=UBERON:0007100;8.71e-17;25!UBERON:0002346;6.71e-16;4!UBERON:0000923;6.71e-16;4!UBERON:0010316;6.71e-16;4!UBERON:0005291;6.71e-16;4!UBERON:0005090;1.59e-15;2!UBERON:0001630;1.59e-15;2!UBERON:0000341;5.33e-15;2!UBERON:0002050;7.82e-13;5!UBERON:0005423;7.82e-13;5!UBERON:0000922;1.02e-12;49!UBERON:0001723;1.31e-10;3!UBERON:0001033;1.31e-10;3!UBERON:0004151;1.82e-10;3!UBERON:0003978;3.50e-10;3!UBERON:0000946;3.50e-10;3!UBERON:0002426;1.05e-08;1!UBERON:0003831;1.05e-08;1!UBERON:0003898;1.05e-08;1!UBERON:0004830;1.05e-08;1!UBERON:0003830;1.05e-08;1!UBERON:0005175;1.05e-08;1!UBERON:0001774;1.05e-08;1!UBERON:0001103;1.05e-08;1!UBERON:0002084;1.31e-08;1!UBERON:0002082;1.31e-08;1!UBERON:0001389;1.57e-08;1!UBERON:0000026;1.57e-08;1!UBERON:0008784;1.57e-08;1!UBERON:0006058;1.57e-08;1!UBERON:0003663;1.57e-08;1!UBERON:0004256;1.57e-08;1!UBERON:0004708;1.57e-08;1!UBERON:0002101;1.57e-08;1!UBERON:0004709;1.57e-08;1!UBERON:0002529;1.57e-08;1!UBERON:0010538;1.57e-08;1!UBERON:0003661;1.57e-08;1!UBERON:0010890;1.57e-08;1!UBERON:0002471;1.57e-08;1!UBERON:0001383;1.57e-08;1!UBERON:0010758;1.57e-08;1!UBERON:0010707;1.57e-08;1!UBERON:0000978;1.57e-08;1!UBERON:0002103;1.57e-08;1!UBERON:0001665;1.57e-08;1!UBERON:0003823;1.57e-08;1!UBERON:0000154;1.57e-08;1!UBERON:0010709;1.57e-08;1!UBERON:0000989;1.88e-08;1!UBERON:0008811;1.88e-08;1!UBERON:0002079;2.42e-08;1!UBERON:0002146;2.42e-08;1!UBERON:0005623;2.42e-08;1!UBERON:0007029;2.79e-08;1!UBERON:0002135;3.57e-08;1!UBERON:0000941;5.62e-08;1!UBERON:0001785;5.62e-08;1!UBERON:0002464;5.62e-08;1!UBERON:0004904;5.62e-08;1!UBERON:0001021;5.62e-08;1!UBERON:0000948;9.30e-08;22!UBERON:0001134;2.24e-07;16!UBERON:0002036;2.24e-07;16|ontology_enrichment_uberon_v019_2=UBERON:0005090,1.43e-15,2;UBERON:0001630,1.43e-15,2;UBERON:0007100,1.74e-15,27;UBERON:0000341,5.52e-15,2;UBERON:0001723,1.28e-10,3;UBERON:0001033,1.28e-10,3;UBERON:0010056,1.28e-10,3;UBERON:0004151,1.87e-10,3;UBERON:0003978,3.12e-10,3;UBERON:0009751,3.12e-10,3;UBERON:0000946,3.12e-10,3;UBERON:0002523,3.12e-10,3;UBERON:0005983,3.12e-10,3;UBERON:0002165,3.12e-10,3;UBERON:0002062,3.12e-10,3;UBERON:0007280,3.12e-10,3;UBERON:0007023,2.55e-09,114;UBERON:0002426,1.05e-08,1;UBERON:0003831,1.05e-08,1;UBERON:0003898,1.05e-08,1;UBERON:0004830,1.05e-08,1;UBERON:0003830,1.05e-08,1;UBERON:0005175,1.05e-08,1;UBERON:0001774,1.05e-08,1;UBERON:0001103,1.05e-08,1;UBERON:0010084,1.05e-08,1;UBERON:0003103,1.18e-08,68;UBERON:0002084,1.31e-08,1;UBERON:0002082,1.31e-08,1;UBERON:0010226,1.31e-08,1;UBERON:0005418,1.41e-08,1;UBERON:0001389,1.41e-08,1;UBERON:0000026,1.41e-08,1;UBERON:0008784,1.41e-08,1;UBERON:0006058,1.41e-08,1;UBERON:0003663,1.41e-08,1;UBERON:0004256,1.41e-08,1;UBERON:0004708,1.41e-08,1;UBERON:0002101,1.41e-08,1;UBERON:0004709,1.41e-08,1;UBERON:0002529,1.41e-08,1;UBERON:0010538,1.41e-08,1;UBERON:0003661,1.41e-08,1;UBERON:0010890,1.41e-08,1;UBERON:0002471,1.41e-08,1;UBERON:0001383,1.41e-08,1;UBERON:0004357,1.41e-08,1;UBERON:0004347,1.41e-08,1;UBERON:000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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=88 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=164 | |||
|TSSclassifier=S | |||
|UniProt=B7Z2N5 | |||
|association_with_transcript=-19bp_to_AK294906_5end | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_4_at_ACTN2_5end | |||
|id=chr1:236882190..236882202,+ | |||
|ontology_enrichment_celltype=CL:0000188!3.70e-07!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.31e-08;1!UBERON:0004874;1.88e-08;1!UBERON:0000358;2.02e-08;1!UBERON:0010227;2.42e-08;1!UBERON:0004140;3.57e-08;1!UBERON:0006222;5.62e-08;1!UBERON:0005425;5.62e-08;1!UBERON:0005062;7.56e-08;4!UBERON:0007284;7.56e-08;4 | |||
|ontology_enrichment_disease=DOID:114!1.71e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.48e-15;2!DOID:178;1.57e-08;1!DOID:326;1.57e-08;1!DOID:3978;1.57e-08;1!DOID:3394;1.57e-08;1!DOID:5844;1.57e-08;1!DOID:1287;3.27e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.54e-15,2;DOID:178,1.63e-08,1;DOID:326,1.63e-08,1;DOID:3978,1.63e-08,1;DOID:3394,1.63e-08,1;DOID:5844,1.63e-08,1;DOID:1287,3.33e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.15e-30!115;UBERON:0002346!3.45e-12!90;UBERON:0001049!9.51e-12!57;UBERON:0005068!9.51e-12!57;UBERON:0006241!9.51e-12!57;UBERON:0007135!9.51e-12!57;UBERON:0002780!9.62e-11!41;UBERON:0001890!9.62e-11!41;UBERON:0006240!9.62e-11!41;UBERON:0003080!2.05e-10!42;UBERON:0002791!2.49e-10!33;UBERON:0001893!5.93e-10!34;UBERON:0002020!6.03e-10!34;UBERON:0003528!6.03e-10!34;UBERON:0002616!6.53e-10!59;UBERON:0000924!2.09e-09!173;UBERON:0006601!2.09e-09!173;UBERON:0003075!2.38e-09!86;UBERON:0007284!2.38e-09!86;UBERON:0000073!9.81e-09!94;UBERON:0001016!9.81e-09!94;UBERON:0001017!1.12e-08!82;UBERON:0005743!4.58e-08!86;UBERON:0000955!9.55e-08!69;UBERON:0006238!9.55e-08!69;UBERON:0001869!1.55e-07!32;UBERON:0001630!1.66e-07!2;UBERON:0005090!1.66e-07!2;UBERON:0004121!2.00e-07!169;UBERON:0002308!2.91e-07!9;UBERON:0000125!2.91e-07!9;UBERON:0000341!2.95e-07!2;UBERON:0001950!7.19e-07!20 | |||
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|short_description=p4@ACTN2 | |||
}} |
Revision as of 04:26, 12 September 2013
Short description: | p4@ACTN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ACTN2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -19bp_to_AK294906_5end |
EntrezGene: | ACTN2 |
HGNC: | 164 |
UniProt: | B7Z2N5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.54e-15 | 2 |
vascular disease | 1.63e-08 | 1 |
ischemia | 1.63e-08 | 1 |
extrinsic cardiomyopathy | 1.63e-08 | 1 |
myocardial ischemia | 1.63e-08 | 1 |
myocardial infarction | 1.63e-08 | 1 |
cardiovascular system disease | 3.33e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.