FFCP PHASE1:Hg19::chr1:231004162..231004173,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=84886|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25900|TSSclassifier=S|UniProt=Q9H425|association_with_transcript=103bp_to_AK027431_5end|coexpression_cluster_id=C3950|description=CAGE_peak_4_at_C1orf198_5end|id=chr1:231004162..231004173,-|ontology_enrichment_celltype=CL:0000055!4.36e-20!180;CL:0000057!1.25e-14!75;CL:0000136!1.64e-09!15;CL:0002620!7.73e-08!23|ontology_enrichment_celltype_v019=CL:0000136;2.31e-11;13!CL:0002334;5.45e-08;12!CL:0000057;8.83e-08;73!CL:0002580;2.77e-07;3!CL:0000346;2.82e-07;3!CL:1000428;2.82e-07;3!CL:0002579;2.82e-07;3!CL:0002615;3.06e-07;3!CL:0000632;4.41e-07;3!CL:0002559;9.44e-07;5|ontology_enrichment_celltype_v019_2=CL:0000057,5.05e-19,76;CL:0000136,9.20e-12,15;CL:0000048,8.80e-11,427;CL:0000723,2.43e-10,433;CL:0000034,8.94e-10,441;CL:0002320,6.60e-09,361;CL:0000134,1.82e-08,354;CL:0000219,4.97e-08,386;CL:0002334,5.40e-08,12;CL:0002580,2.65e-07,3;CL:0002579,2.87e-07,3;CL:0000346,2.93e-07,3;CL:1000428,2.93e-07,3;CL:0002615,3.11e-07,3;CL:0000632,4.53e-07,3;CL:0002559,7.10e-07,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!1.33e-08!365;UBERON:0000914!4.28e-08!83;UBERON:0002329!4.28e-08!83;UBERON:0003077!4.28e-08!83;UBERON:0003059!4.28e-08!83;UBERON:0007282!4.28e-08!83;UBERON:0009618!4.28e-08!83;UBERON:0007285!4.28e-08!83;UBERON:0004290!3.82e-07!70|ontology_enrichment_uberon_v019=UBERON:0004457;2.24e-13;9!UBERON:0000042;2.24e-13;9!UBERON:0003688;7.33e-13;6!UBERON:0002358;7.33e-13;6!UBERON:0003684;7.33e-13;6!UBERON:0001178;7.33e-13;6!UBERON:0000412;2.82e-07;3!UBERON:0001992;2.82e-07;3!UBERON:0002384;9.08e-07;198!UBERON:0002073;9.44e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.57e-13,6;UBERON:0002358,7.57e-13,6;UBERON:0003684,7.57e-13,6;UBERON:0001178,7.57e-13,6;UBERON:0004457,9.70e-10,12;UBERON:0000042,9.70e-10,12;UBERON:0002384,2.81e-09,371;UBERON:0000412,2.93e-07,3;UBERON:0001992,2.93e-07,3;UBERON:0002073,7.10e-07,5;UBERON:0005086,7.10e-07,5;UBERON:0004923,7.59e-07,66|phase1_expression=7.99384868790449,5.56661362116556,9.3029906703341,11.0080628188443,9.83314407740033,10.4680622892044,12.6649939084155,0.631719873426831,0,0.245733936501509,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0.975865597581014,0.246242116153576,1.63200552995402,0.313454721478088,0,0,1.00434111675842,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,2.43806866313962,0,1.79007586580942,1.0843174571537,2.00535164254356,0.289693037921647,2.3858578411533,0,0.283604451492204,0.665188192387692,0.351339142772504,0.327447688744282,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,23.35768172968,2.91250176828533,3.97227542439656,2.0078563452417,0,8.41016400213461,1.06748995729705,1.2333377420858,2.48968828319813,0,0.163461903113459,0.302714855289863,0,0,0,0,0.298897361103602,0,0,0.140450806702248,0,0,0.206651562351531,0,2.22540236350701,0.910161361938026,1.43723628363248,0,0,0.277064115484183,0.438977620880838,3.0648779579902,2.55404700141215,0.226864366320042,1.61450672119976,1.2813443329114,1.90738711043606,0.600182192168805,1.13357782162283,7.21393512127762,5.76962254627928,0.337552664482532,3.11798416515836,1.26216887122057,0.920498986422993,0.80823028409406,3.90510551768276,2.01504196455281,0.847802961552438,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,29.725411142665,14.1513006402435,4.14404764057442,1.85747171212792,0,0,0.168584690078102,0,0,0.217879444092406,0.237270619111097,0.134831308160164,0,0,0,0,5.7620361586396,16.1709582524096,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,1.29149563659404,0,0.462985512576611,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0.190493682876507,0,1.17217447210047,0,0,0,0,0.224262168690721,0,0.1466765716419,0.775630294546667,0,0,7.1803291477915,18.7213386440459,0.257207374262142,0,0,1.85871391755592,0,0,0,1.77695974371273,0,0.301439377059586,1.74306691720059,0.99972991182057,0,0,0,7.42837052023906,12.6348129417525,1.42636905040718,0.579125226670317,0,1.07436577943937,0,0.197030760201927,0,0,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0.858840442033979,1.00034104211935,0,3.11956292296211,3.39015078714607,4.57337003598411,2.45996971484698,2.10662269809403,2.27407504055985,1.03473071292505,1.32845119707087,0.737476674166813,0.434418072340414,0.195801157462741,2.05886054286514,0,0,0,0,0,0,10.9167435440262,14.5788874623659,8.98112302185835,18.0676200450538,10.2341449813341,7.72098821489316,10.3892646511494,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0.182091168006717,1.18011973463482,0,0,0,0,0,0,0,0,0,0.812839312631559,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=84886 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25900 | |||
|TSSclassifier=S | |||
|UniProt=Q9H425 | |||
|association_with_transcript=103bp_to_AK027431_5end | |||
|coexpression_cluster_id=C3950 | |||
|description=CAGE_peak_4_at_C1orf198_5end | |||
|id=chr1:231004162..231004173,- | |||
|ontology_enrichment_celltype=CL:0000055!4.36e-20!180;CL:0000057!1.25e-14!75;CL:0000136!1.64e-09!15;CL:0002620!7.73e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.31e-11;13!CL:0002334;5.45e-08;12!CL:0000057;8.83e-08;73!CL:0002580;2.77e-07;3!CL:0000346;2.82e-07;3!CL:1000428;2.82e-07;3!CL:0002579;2.82e-07;3!CL:0002615;3.06e-07;3!CL:0000632;4.41e-07;3!CL:0002559;9.44e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.05e-19,76;CL:0000136,9.20e-12,15;CL:0000048,8.80e-11,427;CL:0000723,2.43e-10,433;CL:0000034,8.94e-10,441;CL:0002320,6.60e-09,361;CL:0000134,1.82e-08,354;CL:0000219,4.97e-08,386;CL:0002334,5.40e-08,12;CL:0002580,2.65e-07,3;CL:0002579,2.87e-07,3;CL:0000346,2.93e-07,3;CL:1000428,2.93e-07,3;CL:0002615,3.11e-07,3;CL:0000632,4.53e-07,3;CL:0002559,7.10e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.33e-08!365;UBERON:0000914!4.28e-08!83;UBERON:0002329!4.28e-08!83;UBERON:0003077!4.28e-08!83;UBERON:0003059!4.28e-08!83;UBERON:0007282!4.28e-08!83;UBERON:0009618!4.28e-08!83;UBERON:0007285!4.28e-08!83;UBERON:0004290!3.82e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.24e-13;9!UBERON:0000042;2.24e-13;9!UBERON:0003688;7.33e-13;6!UBERON:0002358;7.33e-13;6!UBERON:0003684;7.33e-13;6!UBERON:0001178;7.33e-13;6!UBERON:0000412;2.82e-07;3!UBERON:0001992;2.82e-07;3!UBERON:0002384;9.08e-07;198!UBERON:0002073;9.44e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,7.57e-13,6;UBERON:0002358,7.57e-13,6;UBERON:0003684,7.57e-13,6;UBERON:0001178,7.57e-13,6;UBERON:0004457,9.70e-10,12;UBERON:0000042,9.70e-10,12;UBERON:0002384,2.81e-09,371;UBERON:0000412,2.93e-07,3;UBERON:0001992,2.93e-07,3;UBERON:0002073,7.10e-07,5;UBERON:0005086,7.10e-07,5;UBERON:0004923,7.59e-07,66 | |||
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| |||
|short_description=p4@C1orf198 | |||
}} |
Revision as of 04:12, 12 September 2013
Short description: | p4@C1orf198 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_C1orf198_5end |
Coexpression cluster: | C3950_Hepatic_Hair_Ewing_Preadipocyte_Adipocyte_corpus_neurofibroma |
Association with transcript: | 103bp_to_AK027431_5end |
EntrezGene: | C1orf198 |
HGNC: | 25900 |
UniProt: | Q9H425 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.05e-19 | 76 |
fat cell | 9.20e-12 | 15 |
multi fate stem cell | 8.80e-11 | 427 |
somatic stem cell | 2.43e-10 | 433 |
stem cell | 8.94e-10 | 441 |
connective tissue cell | 6.60e-09 | 361 |
mesenchymal cell | 1.82e-08 | 354 |
motile cell | 4.97e-08 | 386 |
preadipocyte | 5.40e-08 | 12 |
preadipocyte of the breast | 2.65e-07 | 3 |
omentum preadipocyte | 2.87e-07 | 3 |
hair follicle dermal papilla cell | 2.93e-07 | 3 |
stem cell of epidermis | 2.93e-07 | 3 |
adipocyte of omentum tissue | 3.11e-07 | 3 |
hepatic stellate cell | 4.53e-07 | 3 |
hair follicle cell | 7.10e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.57e-13 | 6 |
peritoneum | 7.57e-13 | 6 |
abdominal cavity | 7.57e-13 | 6 |
visceral peritoneum | 7.57e-13 | 6 |
cavity lining | 9.70e-10 | 12 |
serous membrane | 9.70e-10 | 12 |
connective tissue | 2.81e-09 | 371 |
dermal papilla | 2.93e-07 | 3 |
papillary layer of dermis | 2.93e-07 | 3 |
hair follicle | 7.10e-07 | 5 |
hair follicle placode | 7.10e-07 | 5 |
organ component layer | 7.59e-07 | 66 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.