FFCP PHASE1:Hg19::chr1:158301249..158301260,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=910|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1635|TSSclassifier=S|UniProt=P29016|association_with_transcript=60bp_to_ENST00000368168,NM_001764,uc001frx.2,uc010pic.1_5end|coexpression_cluster_id=C54|description=CAGE_peak_8_at_CD1B_5end|id=chr1:158301249..158301260,-|ontology_enrichment_celltype=CL:0000840!4.05e-37!5;CL:0001029!4.05e-37!5;CL:0000990!9.58e-25!8;CL:0000451!3.10e-20!10;CL:0001014!1.71e-18!2;CL:0001016!1.71e-18!2;CL:0000738!1.04e-09!140;CL:0002127!1.07e-09!1;CL:0000914!1.07e-09!1;CL:0000911!1.07e-09!1;CL:0000814!1.07e-09!1;CL:0002042!1.07e-09!1;CL:0002039!1.07e-09!1;CL:0002040!1.07e-09!1;CL:0002041!1.07e-09!1;CL:0002031!1.48e-09!124;CL:0002009!2.11e-09!65;CL:0000557!1.64e-08!71;CL:0000453!6.10e-08!5;CL:0000037!1.82e-07!172;CL:0000566!1.82e-07!172;CL:0002087!5.37e-07!119;CL:0000988!6.31e-07!182|ontology_enrichment_celltype_v019=CL:0000840;1.38e-48;5!CL:0000990;1.37e-32;8!CL:0000451;9.24e-27;10!CL:0001014;3.27e-10;2!CL:0001016;3.27e-10;2|ontology_enrichment_celltype_v019_2=CL:0000840,1.38e-48,5;CL:0001029,1.38e-48,5;CL:0000990,1.37e-32,8;CL:0000451,9.24e-27,10;CL:0001014,3.27e-10,2;CL:0001016,3.27e-10,2|ontology_enrichment_development_v019=UBERON:0006965;2.99e-10;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000974!1.21e-21!10;UBERON:0002370!2.72e-20!4;UBERON:0005058!2.72e-20!4;UBERON:0009113!2.72e-20!4;UBERON:0003295!2.72e-20!4;UBERON:0005562!2.72e-20!4;UBERON:0004177!3.78e-20!7;UBERON:0000341!2.90e-18!2;UBERON:0003351!9.91e-14!6;UBERON:0002390!4.56e-12!102;UBERON:0003061!4.56e-12!102;UBERON:0002193!8.36e-11!112;UBERON:0002405!1.81e-10!115;UBERON:0002336!1.17e-09!1;UBERON:0001018!1.17e-09!1;UBERON:0002473!1.17e-09!1;UBERON:0005340!1.17e-09!1;UBERON:0002316!1.17e-09!1;UBERON:0003544!1.17e-09!1;UBERON:0001020!1.17e-09!1;UBERON:0005970!1.17e-09!1;UBERON:0002437!1.17e-09!1;UBERON:0003408!1.91e-08!10;UBERON:0001042!1.91e-08!10;UBERON:0009145!1.91e-08!10;UBERON:0006562!1.01e-07!11;UBERON:0009722!1.01e-07!11;UBERON:0007690!1.01e-07!11;UBERON:0002371!2.01e-07!80;UBERON:0001474!8.01e-07!86|ontology_enrichment_uberon_v019=UBERON:0002370;5.69e-37;2!UBERON:0005058;5.69e-37;2!UBERON:0009113;5.69e-37;2!UBERON:0004177;1.88e-15;5!UBERON:0005057;1.88e-15;5!UBERON:0000341;3.58e-10;2|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.70e-19,4;UBERON:0005058,4.70e-19,4;UBERON:0009113,4.70e-19,4;UBERON:0003295,4.70e-19,4;UBERON:0005562,4.70e-19,4;UBERON:0000974,8.57e-17,10;UBERON:0003351,4.81e-13,6;UBERON:0004177,2.55e-11,7;UBERON:0005057,2.55e-11,7;UBERON:0000341,3.58e-10,2;UBERON:0003408,3.37e-08,10;UBERON:0001042,3.37e-08,10;UBERON:0009145,3.37e-08,10;UBERON:0006562,1.56e-07,11;UBERON:0009722,1.56e-07,11;UBERON:0007690,1.56e-07,11;UBERON:0002405,8.41e-07,93|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.945687238562,33.7811690360578,41.0840098003293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9195036841956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.1801983522164,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.19739683761629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14963448172101,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,1.66645102024618,20.0225620491619,13.532287716497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02547587182052,0|short_description=p8@CD1B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=910 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1635 | |||
|TSSclassifier=S | |||
|UniProt=P29016 | |||
|association_with_transcript=60bp_to_ENST00000368168,NM_001764,uc001frx.2,uc010pic.1_5end | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_8_at_CD1B_5end | |||
|id=chr1:158301249..158301260,- | |||
|ontology_enrichment_celltype=CL:0000840!4.05e-37!5;CL:0001029!4.05e-37!5;CL:0000990!9.58e-25!8;CL:0000451!3.10e-20!10;CL:0001014!1.71e-18!2;CL:0001016!1.71e-18!2;CL:0000738!1.04e-09!140;CL:0002127!1.07e-09!1;CL:0000914!1.07e-09!1;CL:0000911!1.07e-09!1;CL:0000814!1.07e-09!1;CL:0002042!1.07e-09!1;CL:0002039!1.07e-09!1;CL:0002040!1.07e-09!1;CL:0002041!1.07e-09!1;CL:0002031!1.48e-09!124;CL:0002009!2.11e-09!65;CL:0000557!1.64e-08!71;CL:0000453!6.10e-08!5;CL:0000037!1.82e-07!172;CL:0000566!1.82e-07!172;CL:0002087!5.37e-07!119;CL:0000988!6.31e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000840;1.38e-48;5!CL:0000990;1.37e-32;8!CL:0000451;9.24e-27;10!CL:0001014;3.27e-10;2!CL:0001016;3.27e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,1.38e-48,5;CL:0001029,1.38e-48,5;CL:0000990,1.37e-32,8;CL:0000451,9.24e-27,10;CL:0001014,3.27e-10,2;CL:0001016,3.27e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.99e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000974!1.21e-21!10;UBERON:0002370!2.72e-20!4;UBERON:0005058!2.72e-20!4;UBERON:0009113!2.72e-20!4;UBERON:0003295!2.72e-20!4;UBERON:0005562!2.72e-20!4;UBERON:0004177!3.78e-20!7;UBERON:0000341!2.90e-18!2;UBERON:0003351!9.91e-14!6;UBERON:0002390!4.56e-12!102;UBERON:0003061!4.56e-12!102;UBERON:0002193!8.36e-11!112;UBERON:0002405!1.81e-10!115;UBERON:0002336!1.17e-09!1;UBERON:0001018!1.17e-09!1;UBERON:0002473!1.17e-09!1;UBERON:0005340!1.17e-09!1;UBERON:0002316!1.17e-09!1;UBERON:0003544!1.17e-09!1;UBERON:0001020!1.17e-09!1;UBERON:0005970!1.17e-09!1;UBERON:0002437!1.17e-09!1;UBERON:0003408!1.91e-08!10;UBERON:0001042!1.91e-08!10;UBERON:0009145!1.91e-08!10;UBERON:0006562!1.01e-07!11;UBERON:0009722!1.01e-07!11;UBERON:0007690!1.01e-07!11;UBERON:0002371!2.01e-07!80;UBERON:0001474!8.01e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.69e-37;2!UBERON:0005058;5.69e-37;2!UBERON:0009113;5.69e-37;2!UBERON:0004177;1.88e-15;5!UBERON:0005057;1.88e-15;5!UBERON:0000341;3.58e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.70e-19,4;UBERON:0005058,4.70e-19,4;UBERON:0009113,4.70e-19,4;UBERON:0003295,4.70e-19,4;UBERON:0005562,4.70e-19,4;UBERON:0000974,8.57e-17,10;UBERON:0003351,4.81e-13,6;UBERON:0004177,2.55e-11,7;UBERON:0005057,2.55e-11,7;UBERON:0000341,3.58e-10,2;UBERON:0003408,3.37e-08,10;UBERON:0001042,3.37e-08,10;UBERON:0009145,3.37e-08,10;UBERON:0006562,1.56e-07,11;UBERON:0009722,1.56e-07,11;UBERON:0007690,1.56e-07,11;UBERON:0002405,8.41e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.945687238562,33.7811690360578,41.0840098003293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9195036841956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255679882248303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.1801983522164,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.19739683761629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14963448172101,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,1.66645102024618,20.0225620491619,13.532287716497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02547587182052,0 | |||
|short_description=p8@CD1B | |||
}} |
Revision as of 01:03, 12 September 2013
Short description: | p8@CD1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_CD1B_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 60bp_to_ENST00000368168, NM_001764, uc001frx.2, uc010pic.1_5end |
EntrezGene: | CD1B |
HGNC: | 1635 |
UniProt: | P29016 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 1.38e-48 | 5 |
common dendritic progenitor | 1.38e-48 | 5 |
conventional dendritic cell | 1.37e-32 | 8 |
dendritic cell | 9.24e-27 | 10 |
CD1a-positive Langerhans cell | 3.27e-10 | 2 |
immature CD1a-positive Langerhans cell | 3.27e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.70e-19 | 4 |
hemolymphoid system gland | 4.70e-19 | 4 |
thymic region | 4.70e-19 | 4 |
pharyngeal gland | 4.70e-19 | 4 |
thymus primordium | 4.70e-19 | 4 |
neck | 8.57e-17 | 10 |
pharyngeal epithelium | 4.81e-13 | 6 |
hemopoietic organ | 2.55e-11 | 7 |
immune organ | 2.55e-11 | 7 |
throat | 3.58e-10 | 2 |
gland of gut | 3.37e-08 | 10 |
chordate pharynx | 3.37e-08 | 10 |
pharyngeal region of foregut | 3.37e-08 | 10 |
pharynx | 1.56e-07 | 11 |
entire pharyngeal arch endoderm | 1.56e-07 | 11 |
early pharyngeal endoderm | 1.56e-07 | 11 |
immune system | 8.41e-07 | 93 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.