FFCP PHASE1:Hg19::chr1:156631176..156631189,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=26bp_to_ENST00000448869_5end|coexpression_cluster_id=C3881|description=CAGE_peak_3_at_ENST00000448869_5end|id=chr1:156631176..156631189,-|ontology_enrichment_celltype=CL:0000066!1.27e-21!254;CL:0002139!9.60e-19!24;CL:0000115!9.24e-16!35;CL:0000071!2.02e-14!18;CL:0002546!2.02e-14!18;CL:0000213!8.43e-14!57;CL:0000215!8.43e-14!57;CL:0000076!8.23e-12!62;CL:0002078!8.49e-12!44;CL:1000413!1.39e-08!9|ontology_enrichment_celltype_v019=CL:0002139;4.56e-28;24!CL:0000115;2.16e-22;36!CL:0000071;2.44e-18;18!CL:1000413;7.82e-15;9!CL:0002078;1.43e-13;45!CL:0002138;8.69e-12;6!CL:0000213;2.27e-11;58!CL:0000215;2.27e-11;58!CL:0002544;1.49e-09;6|ontology_enrichment_celltype_v019_2=CL:0002139,4.02e-28,24;CL:0000115,2.25e-25,36;CL:0000213,5.06e-19,58;CL:0000215,5.06e-19,58;CL:0002078,5.87e-19,45;CL:0000066,7.09e-19,253;CL:0000071,1.96e-18,18;CL:0002546,1.96e-18,18;CL:1000413,7.20e-15,9;CL:0000076,9.09e-12,63;CL:0005020,9.99e-12,6;CL:0002138,9.99e-12,6;CL:0005022,9.99e-12,6;CL:0002544,1.42e-09,6|ontology_enrichment_development_v019=CL:0002546;2.44e-18;18!CL:0005022;8.69e-12;6!UBERON:0001041;7.54e-11;30|ontology_enrichment_disease=DOID:305!9.41e-26!106;DOID:14566!3.13e-23!239;DOID:162!5.54e-23!235;DOID:0050687!2.08e-20!143;DOID:0050686!2.19e-08!137;DOID:0050615!1.04e-07!16;DOID:1324!5.82e-07!15|ontology_enrichment_disease_v019=DOID:0050615;1.37e-09;16!DOID:1324;4.12e-08;15|ontology_enrichment_disease_v019_2=DOID:14566,4.45e-18,239;DOID:162,5.61e-17,235;DOID:305,3.16e-16,106;DOID:0050687,9.58e-15,143;DOID:0050615,1.14e-09,16;DOID:1324,3.31e-08,15;DOID:0050686,5.66e-07,137|ontology_enrichment_uberon=UBERON:0001986!2.02e-14!18;UBERON:0004638!2.02e-14!18;UBERON:0004852!2.02e-14!18;UBERON:0000487!1.61e-13!22;UBERON:0006914!6.57e-11!25;UBERON:0003915!1.39e-08!9;UBERON:0004700!1.39e-08!9;UBERON:0001917!1.39e-08!9;UBERON:0000477!1.68e-08!286;UBERON:0001041!2.66e-08!98;UBERON:0004921!2.52e-07!129;UBERON:0004185!2.52e-07!129;UBERON:0004111!9.04e-07!241|ontology_enrichment_uberon_v019=UBERON:0004638;2.44e-18;18!UBERON:0001986;2.44e-18;18!UBERON:0004852;2.44e-18;18!UBERON:0000487;5.76e-17;22!UBERON:0003915;7.82e-15;9!UBERON:0004700;7.82e-15;9!UBERON:0001917;7.82e-15;9!UBERON:0006914;1.80e-14;25!UBERON:0000490;2.76e-10;33!UBERON:0001473;1.19e-08;8!UBERON:0004536;1.19e-08;8!UBERON:0006558;1.19e-08;8!UBERON:0001264;5.26e-07;10!UBERON:0002465;8.96e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.96e-18,18;UBERON:0001986,1.96e-18,18;UBERON:0004852,1.96e-18,18;UBERON:0000487,4.74e-17,22;UBERON:0003915,7.20e-15,9;UBERON:0004700,7.20e-15,9;UBERON:0001917,7.20e-15,9;UBERON:0006914,1.52e-14,25;UBERON:0000055,1.56e-09,68;UBERON:0001473,1.31e-08,8;UBERON:0004536,1.31e-08,8;UBERON:0006558,1.31e-08,8;UBERON:0005177,5.94e-08,101;UBERON:0002049,1.69e-07,78;UBERON:0007798,1.69e-07,78;UBERON:0001264,5.41e-07,10;UBERON:0002465,9.68e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.382067028739756,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.850813354476611,0.221729397462564,1.14185221401064,0.196468613246569,0,0,0,0,0,0,0,0,3.57772333260069,3.4409383804245,4.16568601929113,3.39184765154406,1.25849830862972,3.30141650328081,2.92592953151535,2.06733407335463,1.42306505074684,5.02080919147005,4.83395180530976,0.760272105718513,6.34561349625241,0.735326160691737,2.43042584364528,0.535798369704479,0.673588117878509,0.337834441449967,3.06633274931766,4.74632829784064,1.83201743930407,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0,1.06748995729705,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.505754070234305,0.482022059766964,0.772057809126758,0.217879444092406,1.18635309555548,0.404493924480493,0.784885860501384,0.38474715694639,1.4763109092493,2.80483547606892,0,0,0,0,0,0,0.368965315629341,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0.34779121492523,0,1.01056513432752,1.38895653772983,1.90254152234598,0,0,0,0,0,0,0,0,0,0.290633938513962,0.766765358330422,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0.448524337381443,0.87192013766656,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,1.13733384070897,0.510281115829547,0.215915916102139,1.54227252690289,0,0,0,0,0.4477495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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=26bp_to_ENST00000448869_5end | |||
|coexpression_cluster_id=C3881 | |||
|description=CAGE_peak_3_at_ENST00000448869_5end | |||
|id=chr1:156631176..156631189,- | |||
|ontology_enrichment_celltype=CL:0000066!1.27e-21!254;CL:0002139!9.60e-19!24;CL:0000115!9.24e-16!35;CL:0000071!2.02e-14!18;CL:0002546!2.02e-14!18;CL:0000213!8.43e-14!57;CL:0000215!8.43e-14!57;CL:0000076!8.23e-12!62;CL:0002078!8.49e-12!44;CL:1000413!1.39e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.56e-28;24!CL:0000115;2.16e-22;36!CL:0000071;2.44e-18;18!CL:1000413;7.82e-15;9!CL:0002078;1.43e-13;45!CL:0002138;8.69e-12;6!CL:0000213;2.27e-11;58!CL:0000215;2.27e-11;58!CL:0002544;1.49e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.02e-28,24;CL:0000115,2.25e-25,36;CL:0000213,5.06e-19,58;CL:0000215,5.06e-19,58;CL:0002078,5.87e-19,45;CL:0000066,7.09e-19,253;CL:0000071,1.96e-18,18;CL:0002546,1.96e-18,18;CL:1000413,7.20e-15,9;CL:0000076,9.09e-12,63;CL:0005020,9.99e-12,6;CL:0002138,9.99e-12,6;CL:0005022,9.99e-12,6;CL:0002544,1.42e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.44e-18;18!CL:0005022;8.69e-12;6!UBERON:0001041;7.54e-11;30 | |||
|ontology_enrichment_disease=DOID:305!9.41e-26!106;DOID:14566!3.13e-23!239;DOID:162!5.54e-23!235;DOID:0050687!2.08e-20!143;DOID:0050686!2.19e-08!137;DOID:0050615!1.04e-07!16;DOID:1324!5.82e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:0050615;1.37e-09;16!DOID:1324;4.12e-08;15 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,4.45e-18,239;DOID:162,5.61e-17,235;DOID:305,3.16e-16,106;DOID:0050687,9.58e-15,143;DOID:0050615,1.14e-09,16;DOID:1324,3.31e-08,15;DOID:0050686,5.66e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001986!2.02e-14!18;UBERON:0004638!2.02e-14!18;UBERON:0004852!2.02e-14!18;UBERON:0000487!1.61e-13!22;UBERON:0006914!6.57e-11!25;UBERON:0003915!1.39e-08!9;UBERON:0004700!1.39e-08!9;UBERON:0001917!1.39e-08!9;UBERON:0000477!1.68e-08!286;UBERON:0001041!2.66e-08!98;UBERON:0004921!2.52e-07!129;UBERON:0004185!2.52e-07!129;UBERON:0004111!9.04e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.44e-18;18!UBERON:0001986;2.44e-18;18!UBERON:0004852;2.44e-18;18!UBERON:0000487;5.76e-17;22!UBERON:0003915;7.82e-15;9!UBERON:0004700;7.82e-15;9!UBERON:0001917;7.82e-15;9!UBERON:0006914;1.80e-14;25!UBERON:0000490;2.76e-10;33!UBERON:0001473;1.19e-08;8!UBERON:0004536;1.19e-08;8!UBERON:0006558;1.19e-08;8!UBERON:0001264;5.26e-07;10!UBERON:0002465;8.96e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.96e-18,18;UBERON:0001986,1.96e-18,18;UBERON:0004852,1.96e-18,18;UBERON:0000487,4.74e-17,22;UBERON:0003915,7.20e-15,9;UBERON:0004700,7.20e-15,9;UBERON:0001917,7.20e-15,9;UBERON:0006914,1.52e-14,25;UBERON:0000055,1.56e-09,68;UBERON:0001473,1.31e-08,8;UBERON:0004536,1.31e-08,8;UBERON:0006558,1.31e-08,8;UBERON:0005177,5.94e-08,101;UBERON:0002049,1.69e-07,78;UBERON:0007798,1.69e-07,78;UBERON:0001264,5.41e-07,10;UBERON:0002465,9.68e-07,10 | |||
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| |||
|short_description=p3@ENST00000448869 | |||
}} |
Revision as of 00:56, 12 September 2013
Short description: | p3@ENST00000448869 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENST00000448869_5end |
Coexpression cluster: | C3881_squamous_glioblastoma_chronic_somatostatinoma_smallcell_large_lung |
Association with transcript: | 26bp_to_ENST00000448869_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.02e-28 | 24 |
endothelial cell | 2.25e-25 | 36 |
lining cell | 5.06e-19 | 58 |
barrier cell | 5.06e-19 | 58 |
meso-epithelial cell | 5.87e-19 | 45 |
epithelial cell | 7.09e-19 | 253 |
blood vessel endothelial cell | 1.96e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.96e-18 | 18 |
endothelial cell of artery | 7.20e-15 | 9 |
squamous epithelial cell | 9.09e-12 | 63 |
lymphangioblast | 9.99e-12 | 6 |
endothelial cell of lymphatic vessel | 9.99e-12 | 6 |
vascular lymphangioblast | 9.99e-12 | 6 |
aortic endothelial cell | 1.42e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.96e-18 | 18 |
endothelium | 1.96e-18 | 18 |
cardiovascular system endothelium | 1.96e-18 | 18 |
simple squamous epithelium | 4.74e-17 | 22 |
endothelial tube | 7.20e-15 | 9 |
arterial system endothelium | 7.20e-15 | 9 |
endothelium of artery | 7.20e-15 | 9 |
squamous epithelium | 1.52e-14 | 25 |
vessel | 1.56e-09 | 68 |
lymphatic vessel | 1.31e-08 | 8 |
lymph vasculature | 1.31e-08 | 8 |
lymphatic part of lymphoid system | 1.31e-08 | 8 |
trunk region element | 5.94e-08 | 101 |
vasculature | 1.69e-07 | 78 |
vascular system | 1.69e-07 | 78 |
pancreas | 5.41e-07 | 10 |
lymphoid system | 9.68e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 4.45e-18 | 239 |
cancer | 5.61e-17 | 235 |
carcinoma | 3.16e-16 | 106 |
cell type cancer | 9.58e-15 | 143 |
respiratory system cancer | 1.14e-09 | 16 |
lung cancer | 3.31e-08 | 15 |
organ system cancer | 5.66e-07 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.