FFCP PHASE1:Hg19::chr1:111772329..111772341,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1117|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1933|TSSclassifier=S|UniProt=B4DPR7,Q15782|association_with_transcript=0bp_to_NM_001025199,uc001eao.2,uc009wga.2_5end|coexpression_cluster_id=C359|description=CAGE_peak_7_at_CHI3L2_5end|id=chr1:111772329..111772341,+|ontology_enrichment_celltype=CL:0000542!4.69e-39!53;CL:0000051!4.69e-39!53;CL:0000838!5.63e-37!52;CL:0000945!8.00e-27!24;CL:0000826!8.00e-27!24;CL:0002087!4.96e-18!119;CL:0000738!1.60e-16!140;CL:0002031!2.36e-13!124;CL:0000084!2.53e-12!25;CL:0000827!2.53e-12!25;CL:0000791!5.54e-12!18;CL:0000789!5.54e-12!18;CL:0002420!5.54e-12!18;CL:0002419!5.54e-12!18;CL:0000790!5.54e-12!18;CL:0000037!6.80e-12!172;CL:0000566!6.80e-12!172;CL:0000988!8.58e-11!182;CL:0000817!1.22e-10!3;CL:0000236!1.82e-10!14;CL:0002032!5.86e-10!165;CL:0000837!5.86e-10!165;CL:0000785!6.48e-08!2;CL:0000955!6.48e-08!2;CL:0000818!6.48e-08!2;CL:0000954!6.48e-08!2;CL:0000816!6.48e-08!2;CL:0000893!2.58e-07!2;CL:0002489!2.58e-07!2;CL:0000809!2.58e-07!2;CL:0000808!2.58e-07!2;CL:0000894!2.58e-07!2;CL:0000806!2.58e-07!2;CL:0000807!2.58e-07!2;CL:0000805!2.58e-07!2;CL:0002425!2.58e-07!2|ontology_enrichment_celltype_v019=CL:0000945;2.43e-38;24!CL:0000542;1.49e-11;53!CL:0000946;3.40e-11;1!CL:0000786;3.40e-11;1!CL:0000785;5.30e-11;1!CL:0000819;5.30e-11;1!CL:0002127;1.21e-10;1!CL:0000911;1.21e-10;1!CL:0000814;1.21e-10;1!CL:0000236;4.56e-07;13|ontology_enrichment_celltype_v019_2=CL:0000945,1.95e-38,24;CL:0000826,1.95e-38,24;CL:0000838,1.25e-24,52;CL:0000542,3.93e-24,53;CL:0000051,3.93e-24,53;CL:0000785,2.05e-20,2;CL:0000955,2.05e-20,2;CL:0000818,2.05e-20,2;CL:0000954,2.05e-20,2;CL:0000816,2.05e-20,2;CL:0000817,6.12e-14,3;CL:0000946,3.41e-11,1;CL:0000786,3.41e-11,1;CL:0000980,3.41e-11,1;CL:0000236,3.95e-11,14;CL:0000819,5.57e-11,1;CL:0002127,8.22e-11,1;CL:0000914,8.22e-11,1;CL:0000911,8.22e-11,1;CL:0000814,8.22e-11,1;CL:0002042,8.22e-11,1;CL:0002039,8.22e-11,1;CL:0002040,8.22e-11,1;CL:0002041,8.22e-11,1;CL:0002087,5.29e-10,115;CL:0002031,1.65e-09,120;CL:0000738,3.56e-08,136|ontology_enrichment_development_v019=CL:0000954;1.95e-20;2!CL:0000051;1.49e-11;53!UBERON:0001045;1.21e-10;1|ontology_enrichment_disease=DOID:0060058!7.98e-15!10|ontology_enrichment_disease_v019=DOID:0060058;6.52e-16;10!DOID:630;2.53e-11;1!DOID:0050177;2.53e-11;1!DOID:0050427;2.53e-11;1!DOID:0060073;5.30e-11;1!DOID:8675;5.30e-11;1|ontology_enrichment_disease_v019_2=DOID:0060058,6.65e-16,10;DOID:630,2.53e-11,1;DOID:0050177,2.53e-11,1;DOID:0050427,2.53e-11,1;DOID:0060073,5.57e-11,1;DOID:8675,5.57e-11,1|ontology_enrichment_uberon=UBERON:0004177!5.96e-22!7;UBERON:0002370!3.64e-13!4;UBERON:0005058!3.64e-13!4;UBERON:0009113!3.64e-13!4;UBERON:0003295!3.64e-13!4;UBERON:0005562!3.64e-13!4;UBERON:0002106!1.62e-10!3;UBERON:0004854!1.62e-10!3;UBERON:0009034!1.62e-10!3;UBERON:0002095!1.62e-10!3;UBERON:0004782!1.62e-10!3;UBERON:0003281!1.62e-10!3;UBERON:0009664!1.62e-10!3;UBERON:0002296!1.62e-10!3;UBERON:0005602!1.62e-10!3;UBERON:0001179!1.62e-10!3;UBERON:0006293!1.62e-10!3;UBERON:0003351!8.97e-09!6;UBERON:0001042!8.08e-08!10;UBERON:0009145!8.08e-08!10;UBERON:0000974!1.15e-07!10;UBERON:0006562!4.52e-07!11;UBERON:0009722!6.61e-07!11;UBERON:0007690!6.61e-07!11|ontology_enrichment_uberon_v019=UBERON:0001154;1.21e-10;1!UBERON:0001153;1.21e-10;1!UBERON:0009854;1.21e-10;1!UBERON:0004177;1.32e-08;5!UBERON:0005057;1.32e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.09e-13,7;UBERON:0005057,8.09e-13,7;UBERON:0001154,1.33e-10,1;UBERON:0001153,1.33e-10,1;UBERON:0001045,1.33e-10,1;UBERON:0002370,2.72e-10,4;UBERON:0005058,2.72e-10,4;UBERON:0009113,2.72e-10,4;UBERON:0003295,2.72e-10,4;UBERON:0005562,2.72e-10,4;UBERON:0003351,3.80e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67446920117829,1.64201178899891,2.20390187678302,0,0.383829398097213,0,0,0,0,0.0774672005803016,25.0217849177862,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70692089026603,1.60158394814405,0,0,0,0.569212969109448,0,0.764546456250458,0,0,0,0,0,0.411202997999018,0.334372990781356,0,0,0,0,0.589211814949674,0.221533894583621,0.812411591295047,0,0.520237390239513,1.15106533222573,1.10540007114339,0,0.889719378972363,0,2.09071047609954,0,0.383220493601921,0,0.253019692019503,0,0.651083453856419,0,0.451725357233318,0,0,0.710331756132051,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90544744788996,0,0,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1117 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1933 | |||
|TSSclassifier=S | |||
|UniProt=B4DPR7,Q15782 | |||
|association_with_transcript=0bp_to_NM_001025199,uc001eao.2,uc009wga.2_5end | |||
|coexpression_cluster_id=C359 | |||
|description=CAGE_peak_7_at_CHI3L2_5end | |||
|id=chr1:111772329..111772341,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.69e-39!53;CL:0000051!4.69e-39!53;CL:0000838!5.63e-37!52;CL:0000945!8.00e-27!24;CL:0000826!8.00e-27!24;CL:0002087!4.96e-18!119;CL:0000738!1.60e-16!140;CL:0002031!2.36e-13!124;CL:0000084!2.53e-12!25;CL:0000827!2.53e-12!25;CL:0000791!5.54e-12!18;CL:0000789!5.54e-12!18;CL:0002420!5.54e-12!18;CL:0002419!5.54e-12!18;CL:0000790!5.54e-12!18;CL:0000037!6.80e-12!172;CL:0000566!6.80e-12!172;CL:0000988!8.58e-11!182;CL:0000817!1.22e-10!3;CL:0000236!1.82e-10!14;CL:0002032!5.86e-10!165;CL:0000837!5.86e-10!165;CL:0000785!6.48e-08!2;CL:0000955!6.48e-08!2;CL:0000818!6.48e-08!2;CL:0000954!6.48e-08!2;CL:0000816!6.48e-08!2;CL:0000893!2.58e-07!2;CL:0002489!2.58e-07!2;CL:0000809!2.58e-07!2;CL:0000808!2.58e-07!2;CL:0000894!2.58e-07!2;CL:0000806!2.58e-07!2;CL:0000807!2.58e-07!2;CL:0000805!2.58e-07!2;CL:0002425!2.58e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.43e-38;24!CL:0000542;1.49e-11;53!CL:0000946;3.40e-11;1!CL:0000786;3.40e-11;1!CL:0000785;5.30e-11;1!CL:0000819;5.30e-11;1!CL:0002127;1.21e-10;1!CL:0000911;1.21e-10;1!CL:0000814;1.21e-10;1!CL:0000236;4.56e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.95e-38,24;CL:0000826,1.95e-38,24;CL:0000838,1.25e-24,52;CL:0000542,3.93e-24,53;CL:0000051,3.93e-24,53;CL:0000785,2.05e-20,2;CL:0000955,2.05e-20,2;CL:0000818,2.05e-20,2;CL:0000954,2.05e-20,2;CL:0000816,2.05e-20,2;CL:0000817,6.12e-14,3;CL:0000946,3.41e-11,1;CL:0000786,3.41e-11,1;CL:0000980,3.41e-11,1;CL:0000236,3.95e-11,14;CL:0000819,5.57e-11,1;CL:0002127,8.22e-11,1;CL:0000914,8.22e-11,1;CL:0000911,8.22e-11,1;CL:0000814,8.22e-11,1;CL:0002042,8.22e-11,1;CL:0002039,8.22e-11,1;CL:0002040,8.22e-11,1;CL:0002041,8.22e-11,1;CL:0002087,5.29e-10,115;CL:0002031,1.65e-09,120;CL:0000738,3.56e-08,136 | |||
|ontology_enrichment_development_v019=CL:0000954;1.95e-20;2!CL:0000051;1.49e-11;53!UBERON:0001045;1.21e-10;1 | |||
|ontology_enrichment_disease=DOID:0060058!7.98e-15!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;6.52e-16;10!DOID:630;2.53e-11;1!DOID:0050177;2.53e-11;1!DOID:0050427;2.53e-11;1!DOID:0060073;5.30e-11;1!DOID:8675;5.30e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,6.65e-16,10;DOID:630,2.53e-11,1;DOID:0050177,2.53e-11,1;DOID:0050427,2.53e-11,1;DOID:0060073,5.57e-11,1;DOID:8675,5.57e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.96e-22!7;UBERON:0002370!3.64e-13!4;UBERON:0005058!3.64e-13!4;UBERON:0009113!3.64e-13!4;UBERON:0003295!3.64e-13!4;UBERON:0005562!3.64e-13!4;UBERON:0002106!1.62e-10!3;UBERON:0004854!1.62e-10!3;UBERON:0009034!1.62e-10!3;UBERON:0002095!1.62e-10!3;UBERON:0004782!1.62e-10!3;UBERON:0003281!1.62e-10!3;UBERON:0009664!1.62e-10!3;UBERON:0002296!1.62e-10!3;UBERON:0005602!1.62e-10!3;UBERON:0001179!1.62e-10!3;UBERON:0006293!1.62e-10!3;UBERON:0003351!8.97e-09!6;UBERON:0001042!8.08e-08!10;UBERON:0009145!8.08e-08!10;UBERON:0000974!1.15e-07!10;UBERON:0006562!4.52e-07!11;UBERON:0009722!6.61e-07!11;UBERON:0007690!6.61e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;1.21e-10;1!UBERON:0001153;1.21e-10;1!UBERON:0009854;1.21e-10;1!UBERON:0004177;1.32e-08;5!UBERON:0005057;1.32e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.09e-13,7;UBERON:0005057,8.09e-13,7;UBERON:0001154,1.33e-10,1;UBERON:0001153,1.33e-10,1;UBERON:0001045,1.33e-10,1;UBERON:0002370,2.72e-10,4;UBERON:0005058,2.72e-10,4;UBERON:0009113,2.72e-10,4;UBERON:0003295,2.72e-10,4;UBERON:0005562,2.72e-10,4;UBERON:0003351,3.80e-07,6 | |||
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|short_description=p7@CHI3L2 | |||
}} |
Revision as of 23:31, 11 September 2013
Short description: | p7@CHI3L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_CHI3L2_5end |
Coexpression cluster: | C359_xeroderma_tonsil_acute_colon_lymph_trachea_bladder |
Association with transcript: | 0bp_to_NM_001025199, uc001eao.2, uc009wga.2_5end |
EntrezGene: | CHI3L2 |
HGNC: | 1933 |
UniProt: | B4DPR7Q15782 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.95e-38 | 24 |
pro-B cell | 1.95e-38 | 24 |
lymphoid lineage restricted progenitor cell | 1.25e-24 | 52 |
lymphocyte | 3.93e-24 | 53 |
common lymphoid progenitor | 3.93e-24 | 53 |
mature B cell | 2.05e-20 | 2 |
pre-B-II cell | 2.05e-20 | 2 |
transitional stage B cell | 2.05e-20 | 2 |
small pre-B-II cell | 2.05e-20 | 2 |
immature B cell | 2.05e-20 | 2 |
precursor B cell | 6.12e-14 | 3 |
antibody secreting cell | 3.41e-11 | 1 |
plasma cell | 3.41e-11 | 1 |
plasmablast | 3.41e-11 | 1 |
B cell | 3.95e-11 | 14 |
B-1 B cell | 5.57e-11 | 1 |
innate effector T cell | 8.22e-11 | 1 |
immature NK T cell | 8.22e-11 | 1 |
effector T cell | 8.22e-11 | 1 |
mature NK T cell | 8.22e-11 | 1 |
immature NK T cell stage IV | 8.22e-11 | 1 |
immature NK T cell stage I | 8.22e-11 | 1 |
immature NK T cell stage II | 8.22e-11 | 1 |
immature NK T cell stage III | 8.22e-11 | 1 |
nongranular leukocyte | 5.29e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.65e-09 | 120 |
leukocyte | 3.56e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 8.09e-13 | 7 |
immune organ | 8.09e-13 | 7 |
vermiform appendix | 1.33e-10 | 1 |
caecum | 1.33e-10 | 1 |
midgut | 1.33e-10 | 1 |
thymus | 2.72e-10 | 4 |
hemolymphoid system gland | 2.72e-10 | 4 |
thymic region | 2.72e-10 | 4 |
pharyngeal gland | 2.72e-10 | 4 |
thymus primordium | 2.72e-10 | 4 |
pharyngeal epithelium | 3.80e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 6.65e-16 | 10 |
genetic disease | 2.53e-11 | 1 |
monogenic disease | 2.53e-11 | 1 |
xeroderma pigmentosum | 2.53e-11 | 1 |
lymphatic system cancer | 5.57e-11 | 1 |
lymphosarcoma | 5.57e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.