FFCP PHASE1:Mm9::chr2:34819390..34819406,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=807|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:34819390..34819406,+|id=chr2:34819390..34819406,+|ontology_enrichment_celltype=CL:0000988!1.57e-25!32;CL:0002032!1.57e-25!32;CL:0000037!1.57e-25!32;CL:0000566!1.57e-25!32;CL:0000837!1.57e-25!32;CL:0000838!1.36e-23!12;CL:0000542!1.38e-21!13;CL:0000051!1.38e-21!13;CL:0000084!3.15e-21!11;CL:0000827!3.15e-21!11;CL:0000738!5.30e-19!17;CL:0002087!5.30e-19!17;CL:0002031!1.19e-18!25;CL:0000791!8.55e-18!9;CL:0000789!8.55e-18!9;CL:0002420!8.55e-18!9;CL:0002419!8.55e-18!9;CL:0000790!8.55e-18!9;CL:0002320!2.78e-16!46;CL:0000134!2.78e-16!46;CL:0000624!1.39e-15!8;CL:0000893!1.62e-15!6;CL:0002489!1.62e-15!6;CL:0000898!1.62e-15!6;CL:0000809!1.62e-15!6;CL:0000810!1.62e-15!6;CL:0000895!1.62e-15!6;CL:0000808!1.62e-15!6;CL:0000894!1.62e-15!6;CL:0000806!1.62e-15!6;CL:0000807!1.62e-15!6;CL:0000805!1.62e-15!6;CL:0002425!1.62e-15!6;CL:0002436!1.62e-15!6;CL:0002427!1.62e-15!6;CL:0002428!1.62e-15!6;CL:0002429!1.62e-15!6;CL:0002433!1.62e-15!6;CL:0002431!1.62e-15!6;CL:0002432!1.62e-15!6;CL:0000219!3.67e-13!54;CL:0000063!6.46e-10!66;CL:0000049!4.94e-08!19;CL:0000034!5.84e-08!97|ontology_enrichment_celltype_v019_2=CL:0000791,2.98e-27,9;CL:0000789,2.98e-27,9;CL:0002420,2.98e-27,9;CL:0002419,2.98e-27,9;CL:0000790,2.98e-27,9;CL:0000838,2.02e-26,12;CL:0000542,2.54e-24,13;CL:0000051,2.54e-24,13;CL:0000738,5.87e-23,17;CL:0002087,5.87e-23,17;CL:0000624,6.26e-23,8;CL:0000084,3.47e-22,11;CL:0000827,3.47e-22,11;CL:0000893,2.16e-21,6;CL:0002489,2.16e-21,6;CL:0000898,2.16e-21,6;CL:0000809,2.16e-21,6;CL:0000810,2.16e-21,6;CL:0000895,2.16e-21,6;CL:0000808,2.16e-21,6;CL:0000894,2.16e-21,6;CL:0000806,2.16e-21,6;CL:0000807,2.16e-21,6;CL:0000805,2.16e-21,6;CL:0002425,2.16e-21,6;CL:0002436,2.16e-21,6;CL:0002427,2.16e-21,6;CL:0002428,2.16e-21,6;CL:0002429,2.16e-21,6;CL:0002433,2.16e-21,6;CL:0002431,2.16e-21,6;CL:0002432,2.16e-21,6;CL:0002031,3.04e-15,25;CL:0000988,2.50e-14,32;CL:0002032,2.50e-14,32;CL:0000037,2.50e-14,32;CL:0000837,2.50e-14,32;CL:0002320,1.56e-09,46;CL:0000134,1.56e-09,46;CL:0000219,6.61e-08,54;CL:0000034,8.03e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!5.81e-27!23;UBERON:0000974!5.81e-27!23;UBERON:0004807!5.81e-27!23;UBERON:0005058!5.81e-27!23;UBERON:0003351!5.81e-27!23;UBERON:0009113!5.81e-27!23;UBERON:0003295!5.81e-27!23;UBERON:0009722!5.81e-27!23;UBERON:0005562!5.81e-27!23;UBERON:0007690!5.81e-27!23;UBERON:0006562!1.15e-25!24;UBERON:0003408!1.15e-25!24;UBERON:0001557!1.15e-25!24;UBERON:0001042!1.15e-25!24;UBERON:0008814!1.15e-25!24;UBERON:0009145!1.15e-25!24;UBERON:0002390!8.46e-23!45;UBERON:0003061!8.46e-23!45;UBERON:0000072!2.38e-22!27;UBERON:0002193!4.98e-21!48;UBERON:0004177!1.61e-20!29;UBERON:0000063!2.70e-16!35;UBERON:0002384!2.78e-16!46;UBERON:0000065!2.59e-13!41;UBERON:0001004!6.72e-13!42;UBERON:0002405!1.05e-12!70;UBERON:0003081!4.88e-11!88;UBERON:0005057!6.43e-10!51;UBERON:0003929!6.53e-09!55;UBERON:0002368!7.56e-08!60;UBERON:0002530!5.94e-07!65;UBERON:0000490!8.63e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.09e-16,23;UBERON:0000974,2.09e-16,23;UBERON:0004807,2.09e-16,23;UBERON:0005058,2.09e-16,23;UBERON:0003351,2.09e-16,23;UBERON:0009113,2.09e-16,23;UBERON:0003295,2.09e-16,23;UBERON:0009722,2.09e-16,23;UBERON:0005562,2.09e-16,23;UBERON:0007690,2.09e-16,23;UBERON:0006562,1.13e-15,24;UBERON:0003408,1.13e-15,24;UBERON:0001557,1.13e-15,24;UBERON:0001042,1.13e-15,24;UBERON:0008814,1.13e-15,24;UBERON:0009145,1.13e-15,24;UBERON:0000072,8.37e-14,27;UBERON:0004177,9.03e-13,29;UBERON:0005057,9.03e-13,29;UBERON:0000077,2.24e-10,35;UBERON:0007811,4.69e-10,36;UBERON:0002390,1.33e-09,45;UBERON:0003061,1.33e-09,45;UBERON:0002384,1.56e-09,46;UBERON:0002193,6.51e-09,48;UBERON:0002405,6.51e-09,48;UBERON:0000065,1.11e-08,41;UBERON:0001004,1.91e-08,42;UBERON:0000153,3.21e-08,43|phase1_expression=0,0,0,0,0,0,0,6.06879620175408,4.92760527530834,6.55380673701582,4.10923123741212,3.11111420081812,1.88320802924326,0.961624426608971,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35565212115473,0,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7972268675888,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0.387904974335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0596117398894,3.07893195112048,3.73139929271944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0,0.25984164595559,0,0.596044064343795,0.721172697119813,0.738447635872886,1.11063094942962,0.457240839929999,0.806609481094724,0.194915761479505,1.82802499116626,2.10378423926824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:34819390..34819406,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=807 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:34819390..34819406,+ | |||
|id=chr2:34819390..34819406,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.57e-25!32;CL:0002032!1.57e-25!32;CL:0000037!1.57e-25!32;CL:0000566!1.57e-25!32;CL:0000837!1.57e-25!32;CL:0000838!1.36e-23!12;CL:0000542!1.38e-21!13;CL:0000051!1.38e-21!13;CL:0000084!3.15e-21!11;CL:0000827!3.15e-21!11;CL:0000738!5.30e-19!17;CL:0002087!5.30e-19!17;CL:0002031!1.19e-18!25;CL:0000791!8.55e-18!9;CL:0000789!8.55e-18!9;CL:0002420!8.55e-18!9;CL:0002419!8.55e-18!9;CL:0000790!8.55e-18!9;CL:0002320!2.78e-16!46;CL:0000134!2.78e-16!46;CL:0000624!1.39e-15!8;CL:0000893!1.62e-15!6;CL:0002489!1.62e-15!6;CL:0000898!1.62e-15!6;CL:0000809!1.62e-15!6;CL:0000810!1.62e-15!6;CL:0000895!1.62e-15!6;CL:0000808!1.62e-15!6;CL:0000894!1.62e-15!6;CL:0000806!1.62e-15!6;CL:0000807!1.62e-15!6;CL:0000805!1.62e-15!6;CL:0002425!1.62e-15!6;CL:0002436!1.62e-15!6;CL:0002427!1.62e-15!6;CL:0002428!1.62e-15!6;CL:0002429!1.62e-15!6;CL:0002433!1.62e-15!6;CL:0002431!1.62e-15!6;CL:0002432!1.62e-15!6;CL:0000219!3.67e-13!54;CL:0000063!6.46e-10!66;CL:0000049!4.94e-08!19;CL:0000034!5.84e-08!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.98e-27,9;CL:0000789,2.98e-27,9;CL:0002420,2.98e-27,9;CL:0002419,2.98e-27,9;CL:0000790,2.98e-27,9;CL:0000838,2.02e-26,12;CL:0000542,2.54e-24,13;CL:0000051,2.54e-24,13;CL:0000738,5.87e-23,17;CL:0002087,5.87e-23,17;CL:0000624,6.26e-23,8;CL:0000084,3.47e-22,11;CL:0000827,3.47e-22,11;CL:0000893,2.16e-21,6;CL:0002489,2.16e-21,6;CL:0000898,2.16e-21,6;CL:0000809,2.16e-21,6;CL:0000810,2.16e-21,6;CL:0000895,2.16e-21,6;CL:0000808,2.16e-21,6;CL:0000894,2.16e-21,6;CL:0000806,2.16e-21,6;CL:0000807,2.16e-21,6;CL:0000805,2.16e-21,6;CL:0002425,2.16e-21,6;CL:0002436,2.16e-21,6;CL:0002427,2.16e-21,6;CL:0002428,2.16e-21,6;CL:0002429,2.16e-21,6;CL:0002433,2.16e-21,6;CL:0002431,2.16e-21,6;CL:0002432,2.16e-21,6;CL:0002031,3.04e-15,25;CL:0000988,2.50e-14,32;CL:0002032,2.50e-14,32;CL:0000037,2.50e-14,32;CL:0000837,2.50e-14,32;CL:0002320,1.56e-09,46;CL:0000134,1.56e-09,46;CL:0000219,6.61e-08,54;CL:0000034,8.03e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!5.81e-27!23;UBERON:0000974!5.81e-27!23;UBERON:0004807!5.81e-27!23;UBERON:0005058!5.81e-27!23;UBERON:0003351!5.81e-27!23;UBERON:0009113!5.81e-27!23;UBERON:0003295!5.81e-27!23;UBERON:0009722!5.81e-27!23;UBERON:0005562!5.81e-27!23;UBERON:0007690!5.81e-27!23;UBERON:0006562!1.15e-25!24;UBERON:0003408!1.15e-25!24;UBERON:0001557!1.15e-25!24;UBERON:0001042!1.15e-25!24;UBERON:0008814!1.15e-25!24;UBERON:0009145!1.15e-25!24;UBERON:0002390!8.46e-23!45;UBERON:0003061!8.46e-23!45;UBERON:0000072!2.38e-22!27;UBERON:0002193!4.98e-21!48;UBERON:0004177!1.61e-20!29;UBERON:0000063!2.70e-16!35;UBERON:0002384!2.78e-16!46;UBERON:0000065!2.59e-13!41;UBERON:0001004!6.72e-13!42;UBERON:0002405!1.05e-12!70;UBERON:0003081!4.88e-11!88;UBERON:0005057!6.43e-10!51;UBERON:0003929!6.53e-09!55;UBERON:0002368!7.56e-08!60;UBERON:0002530!5.94e-07!65;UBERON:0000490!8.63e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.09e-16,23;UBERON:0000974,2.09e-16,23;UBERON:0004807,2.09e-16,23;UBERON:0005058,2.09e-16,23;UBERON:0003351,2.09e-16,23;UBERON:0009113,2.09e-16,23;UBERON:0003295,2.09e-16,23;UBERON:0009722,2.09e-16,23;UBERON:0005562,2.09e-16,23;UBERON:0007690,2.09e-16,23;UBERON:0006562,1.13e-15,24;UBERON:0003408,1.13e-15,24;UBERON:0001557,1.13e-15,24;UBERON:0001042,1.13e-15,24;UBERON:0008814,1.13e-15,24;UBERON:0009145,1.13e-15,24;UBERON:0000072,8.37e-14,27;UBERON:0004177,9.03e-13,29;UBERON:0005057,9.03e-13,29;UBERON:0000077,2.24e-10,35;UBERON:0007811,4.69e-10,36;UBERON:0002390,1.33e-09,45;UBERON:0003061,1.33e-09,45;UBERON:0002384,1.56e-09,46;UBERON:0002193,6.51e-09,48;UBERON:0002405,6.51e-09,48;UBERON:0000065,1.11e-08,41;UBERON:0001004,1.91e-08,42;UBERON:0000153,3.21e-08,43 | |||
|phase1_expression=0,0,0,0,0,0,0,6.06879620175408,4.92760527530834,6.55380673701582,4.10923123741212,3.11111420081812,1.88320802924326,0.961624426608971,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0,0,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35565212115473,0,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7972268675888,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0.387904974335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08781136763742,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0596117398894,3.07893195112048,3.73139929271944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0,0.25984164595559,0,0.596044064343795,0.721172697119813,0.738447635872886,1.11063094942962,0.457240839929999,0.806609481094724,0.194915761479505,1.82802499116626,2.10378423926824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:34819390..34819406,+ | |||
}} |
Revision as of 23:54, 13 September 2013
Short description: | p@chr2:34819390..34819406, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:34819390..34819406, + |
Coexpression cluster: | MCL_coexpression_mm9:807 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.09e-16 | 23 |
neck | 2.09e-16 | 23 |
respiratory system epithelium | 2.09e-16 | 23 |
hemolymphoid system gland | 2.09e-16 | 23 |
pharyngeal epithelium | 2.09e-16 | 23 |
thymic region | 2.09e-16 | 23 |
pharyngeal gland | 2.09e-16 | 23 |
entire pharyngeal arch endoderm | 2.09e-16 | 23 |
thymus primordium | 2.09e-16 | 23 |
early pharyngeal endoderm | 2.09e-16 | 23 |
pharynx | 1.13e-15 | 24 |
gland of gut | 1.13e-15 | 24 |
upper respiratory tract | 1.13e-15 | 24 |
chordate pharynx | 1.13e-15 | 24 |
pharyngeal arch system | 1.13e-15 | 24 |
pharyngeal region of foregut | 1.13e-15 | 24 |
segment of respiratory tract | 8.37e-14 | 27 |
hemopoietic organ | 9.03e-13 | 29 |
immune organ | 9.03e-13 | 29 |
mixed endoderm/mesoderm-derived structure | 2.24e-10 | 35 |
craniocervical region | 4.69e-10 | 36 |
hematopoietic system | 1.33e-09 | 45 |
blood island | 1.33e-09 | 45 |
connective tissue | 1.56e-09 | 46 |
hemolymphoid system | 6.51e-09 | 48 |
immune system | 6.51e-09 | 48 |
respiratory tract | 1.11e-08 | 41 |
respiratory system | 1.91e-08 | 42 |
anterior region of body | 3.21e-08 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.