FFCP PHASE1:Mm9::chr7:31092226..31092249,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=168|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:31092226..31092249,+|id=chr7:31092226..31092249,+|ontology_enrichment_celltype=CL:0002319!3.34e-13!43;CL:0000221!1.46e-12!44;CL:0000133!1.46e-12!44;CL:0000117!3.29e-12!23;CL:0000337!3.29e-12!23;CL:0000055!2.87e-11!50;CL:0000540!6.68e-10!33;CL:0000047!6.68e-10!33;CL:0000031!6.68e-10!33;CL:0000404!6.68e-10!33;CL:0000393!1.34e-08!39;CL:0000211!1.34e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.61e-18,23;CL:0000337,4.61e-18,23;CL:0002319,1.45e-12,43;CL:0000221,3.52e-12,44;CL:0000133,3.52e-12,44;CL:0000540,1.62e-11,33;CL:0000047,1.62e-11,33;CL:0000031,1.62e-11,33;CL:0000404,1.62e-11,33;CL:0000393,3.24e-09,39;CL:0000211,3.24e-09,39;CL:0002614,8.96e-08,3;CL:0002610,2.24e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.16e-29!75;UBERON:0001016!4.16e-29!75;UBERON:0001017!8.32e-29!73;UBERON:0005743!8.32e-29!73;UBERON:0001049!1.05e-24!52;UBERON:0005068!1.05e-24!52;UBERON:0006241!1.05e-24!52;UBERON:0007135!1.05e-24!52;UBERON:0000955!1.92e-23!50;UBERON:0006238!1.92e-23!50;UBERON:0002616!1.08e-22!49;UBERON:0004121!1.53e-22!102;UBERON:0000924!1.53e-22!102;UBERON:0006601!1.53e-22!102;UBERON:0002346!2.67e-22!71;UBERON:0003075!2.67e-22!71;UBERON:0007284!2.67e-22!71;UBERON:0000033!3.56e-20!63;UBERON:0002020!1.25e-19!34;UBERON:0003080!3.47e-18!40;UBERON:0003056!7.28e-18!49;UBERON:0002780!1.64e-17!39;UBERON:0001890!1.64e-17!39;UBERON:0006240!1.64e-17!39;UBERON:0002791!3.08e-16!29;UBERON:0003528!3.08e-16!29;UBERON:0001893!3.08e-16!29;UBERON:0000956!3.60e-14!21;UBERON:0001869!3.60e-14!21;UBERON:0000203!3.60e-14!21;UBERON:0002619!5.63e-12!17;UBERON:0007811!9.37e-11!86;UBERON:0000153!1.17e-09!94;UBERON:0002021!2.35e-08!10;UBERON:0000411!2.35e-08!10;UBERON:0001950!2.35e-08!10;UBERON:0003076!4.16e-07!12;UBERON:0003057!4.16e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.41e-37,73;UBERON:0001016,5.50e-36,75;UBERON:0000073,9.19e-36,54;UBERON:0001049,2.99e-32,52;UBERON:0005068,2.99e-32,52;UBERON:0006241,2.99e-32,52;UBERON:0007135,2.99e-32,52;UBERON:0002020,9.86e-30,34;UBERON:0004121,2.14e-28,95;UBERON:0000924,2.14e-28,95;UBERON:0006601,2.14e-28,95;UBERON:0002346,9.27e-27,64;UBERON:0003075,9.27e-27,64;UBERON:0007284,9.27e-27,64;UBERON:0000955,1.89e-26,47;UBERON:0006238,1.89e-26,47;UBERON:0002616,7.43e-25,46;UBERON:0003080,2.63e-24,40;UBERON:0003528,7.00e-24,29;UBERON:0002791,7.00e-24,29;UBERON:0001893,7.00e-24,29;UBERON:0002780,8.93e-23,39;UBERON:0001890,8.93e-23,39;UBERON:0006240,8.93e-23,39;UBERON:0010371,1.47e-22,73;UBERON:0003056,1.27e-20,49;UBERON:0010314,2.17e-16,92;UBERON:0000956,8.99e-16,21;UBERON:0001869,8.99e-16,21;UBERON:0000203,8.99e-16,21;UBERON:0002619,9.37e-15,17;UBERON:0002021,2.88e-14,10;UBERON:0000411,2.88e-14,10;UBERON:0001950,2.88e-14,10;UBERON:0000025,7.73e-11,114;UBERON:0004111,1.14e-09,122;UBERON:0002950,1.69e-09,4;UBERON:0001891,1.69e-09,4;UBERON:0009616,1.69e-09,4;UBERON:0010286,1.69e-09,4;UBERON:0002420,2.40e-09,8;UBERON:0007245,2.40e-09,8;UBERON:0010009,2.40e-09,8;UBERON:0010011,2.40e-09,8;UBERON:0000454,2.40e-09,8;UBERON:0002240,6.65e-09,6;UBERON:0005174,6.65e-09,6;UBERON:0001137,6.65e-09,6;UBERON:0011216,7.82e-09,194;UBERON:0003076,3.33e-08,12;UBERON:0003057,3.33e-08,12;UBERON:0002038,8.96e-08,3;UBERON:0009663,8.96e-08,3;UBERON:0009661,8.96e-08,3;UBERON:0000125,8.96e-08,3;UBERON:0002308,8.96e-08,3;UBERON:0004684,2.24e-07,3;UBERON:0002275,2.24e-07,3;UBERON:0001948,4.77e-07,5;UBERON:0002315,4.77e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0,0,0.872100625521786,0.659058548203415,0.777719596297134,0.419959264876088,2.87505128729943,0,0,0,0.257259436035947,0,0,0.809265843438391,1.05798195854407,0,0,0,0.449949858640699,0,0,2.39680088414724,4.2264013585371,0.829516898467821,1.21505344498522,0.841299845405528,1.71390590642282,1.32521124570968,0.367472397644862,3.1629005436018,0.919218786610021,1.10115880999389,2.42605942361857,4.76180253094355,1.18697658957174,2.01272815925301,0,2.51264699101243,2.8138130501584,2.44477196442896,2.06240009831567,1.70846016958924,0.931997229126503,0.37863096666592,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0.304465478312141,0.230615497256059,0.452167921657868,0.470354828542819,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0.585561594023094,8.16842156572475,0,0,0,0,1.49790639404823,0,1.13088916901578,1.21677024134594,1.27857728665165,1.45451631191692,1.78465389374533,0.509196819251581,0.124406970610093,0,0,0.260240885925407,0,0,0.150704817835715,0.95251098811859,0.768682321709099,0.468508622798644,1.29351685369508,0.646703978798527,0,0.175951124163949,0.219195732427575,0,0,0,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0,0,0,0,0.116765342367169,0,0,0.162137619091711,0,0,0,1.26173969138476,3.0871383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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=168 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:31092226..31092249,+ | |||
|id=chr7:31092226..31092249,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.34e-13!43;CL:0000221!1.46e-12!44;CL:0000133!1.46e-12!44;CL:0000117!3.29e-12!23;CL:0000337!3.29e-12!23;CL:0000055!2.87e-11!50;CL:0000540!6.68e-10!33;CL:0000047!6.68e-10!33;CL:0000031!6.68e-10!33;CL:0000404!6.68e-10!33;CL:0000393!1.34e-08!39;CL:0000211!1.34e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.61e-18,23;CL:0000337,4.61e-18,23;CL:0002319,1.45e-12,43;CL:0000221,3.52e-12,44;CL:0000133,3.52e-12,44;CL:0000540,1.62e-11,33;CL:0000047,1.62e-11,33;CL:0000031,1.62e-11,33;CL:0000404,1.62e-11,33;CL:0000393,3.24e-09,39;CL:0000211,3.24e-09,39;CL:0002614,8.96e-08,3;CL:0002610,2.24e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.16e-29!75;UBERON:0001016!4.16e-29!75;UBERON:0001017!8.32e-29!73;UBERON:0005743!8.32e-29!73;UBERON:0001049!1.05e-24!52;UBERON:0005068!1.05e-24!52;UBERON:0006241!1.05e-24!52;UBERON:0007135!1.05e-24!52;UBERON:0000955!1.92e-23!50;UBERON:0006238!1.92e-23!50;UBERON:0002616!1.08e-22!49;UBERON:0004121!1.53e-22!102;UBERON:0000924!1.53e-22!102;UBERON:0006601!1.53e-22!102;UBERON:0002346!2.67e-22!71;UBERON:0003075!2.67e-22!71;UBERON:0007284!2.67e-22!71;UBERON:0000033!3.56e-20!63;UBERON:0002020!1.25e-19!34;UBERON:0003080!3.47e-18!40;UBERON:0003056!7.28e-18!49;UBERON:0002780!1.64e-17!39;UBERON:0001890!1.64e-17!39;UBERON:0006240!1.64e-17!39;UBERON:0002791!3.08e-16!29;UBERON:0003528!3.08e-16!29;UBERON:0001893!3.08e-16!29;UBERON:0000956!3.60e-14!21;UBERON:0001869!3.60e-14!21;UBERON:0000203!3.60e-14!21;UBERON:0002619!5.63e-12!17;UBERON:0007811!9.37e-11!86;UBERON:0000153!1.17e-09!94;UBERON:0002021!2.35e-08!10;UBERON:0000411!2.35e-08!10;UBERON:0001950!2.35e-08!10;UBERON:0003076!4.16e-07!12;UBERON:0003057!4.16e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.41e-37,73;UBERON:0001016,5.50e-36,75;UBERON:0000073,9.19e-36,54;UBERON:0001049,2.99e-32,52;UBERON:0005068,2.99e-32,52;UBERON:0006241,2.99e-32,52;UBERON:0007135,2.99e-32,52;UBERON:0002020,9.86e-30,34;UBERON:0004121,2.14e-28,95;UBERON:0000924,2.14e-28,95;UBERON:0006601,2.14e-28,95;UBERON:0002346,9.27e-27,64;UBERON:0003075,9.27e-27,64;UBERON:0007284,9.27e-27,64;UBERON:0000955,1.89e-26,47;UBERON:0006238,1.89e-26,47;UBERON:0002616,7.43e-25,46;UBERON:0003080,2.63e-24,40;UBERON:0003528,7.00e-24,29;UBERON:0002791,7.00e-24,29;UBERON:0001893,7.00e-24,29;UBERON:0002780,8.93e-23,39;UBERON:0001890,8.93e-23,39;UBERON:0006240,8.93e-23,39;UBERON:0010371,1.47e-22,73;UBERON:0003056,1.27e-20,49;UBERON:0010314,2.17e-16,92;UBERON:0000956,8.99e-16,21;UBERON:0001869,8.99e-16,21;UBERON:0000203,8.99e-16,21;UBERON:0002619,9.37e-15,17;UBERON:0002021,2.88e-14,10;UBERON:0000411,2.88e-14,10;UBERON:0001950,2.88e-14,10;UBERON:0000025,7.73e-11,114;UBERON:0004111,1.14e-09,122;UBERON:0002950,1.69e-09,4;UBERON:0001891,1.69e-09,4;UBERON:0009616,1.69e-09,4;UBERON:0010286,1.69e-09,4;UBERON:0002420,2.40e-09,8;UBERON:0007245,2.40e-09,8;UBERON:0010009,2.40e-09,8;UBERON:0010011,2.40e-09,8;UBERON:0000454,2.40e-09,8;UBERON:0002240,6.65e-09,6;UBERON:0005174,6.65e-09,6;UBERON:0001137,6.65e-09,6;UBERON:0011216,7.82e-09,194;UBERON:0003076,3.33e-08,12;UBERON:0003057,3.33e-08,12;UBERON:0002038,8.96e-08,3;UBERON:0009663,8.96e-08,3;UBERON:0009661,8.96e-08,3;UBERON:0000125,8.96e-08,3;UBERON:0002308,8.96e-08,3;UBERON:0004684,2.24e-07,3;UBERON:0002275,2.24e-07,3;UBERON:0001948,4.77e-07,5;UBERON:0002315,4.77e-07,5 | |||
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|short_description=p@chr7:31092226..31092249,+ | |||
}} |
Revision as of 13:11, 14 September 2013
Short description: | p@chr7:31092226..31092249, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:31092226..31092249, + |
Coexpression cluster: | MCL_coexpression_mm9:168 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.61e-18 | 23 |
neuroblast (sensu Vertebrata) | 4.61e-18 | 23 |
neural cell | 1.45e-12 | 43 |
ectodermal cell | 3.52e-12 | 44 |
neurectodermal cell | 3.52e-12 | 44 |
neuron | 1.62e-11 | 33 |
neuronal stem cell | 1.62e-11 | 33 |
neuroblast | 1.62e-11 | 33 |
electrically signaling cell | 1.62e-11 | 33 |
electrically responsive cell | 3.24e-09 | 39 |
electrically active cell | 3.24e-09 | 39 |
neuron of the substantia nigra | 8.96e-08 | 3 |
raphe nuclei neuron | 2.24e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.